RNA–Protein interactions for RNA: ENST00000562836.5

CDH1-205, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 2,759 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-205ENST00000562836 CFHR1Q03591 330 aa7.4□□□□□ -1.22
CDH1-205ENST00000562836 LINC01559Q495D7 138 aa7.4□□□□□ -1.22
CDH1-205ENST00000562836 FMC1Q96HJ9 113 aa7.4□□□□□ -1.22
CDH1-205ENST00000562836 CALYQ9NYX4 217 aa7.4□□□□□ -1.22
CDH1-205ENST00000562836 SYNGR2O43760 224 aa7.4□□□□□ -1.23
CDH1-205ENST00000562836 SCRG1O75711 98 aa7.4□□□□□ -1.23
CDH1-205ENST00000562836 VSIG8P0DPA2 414 aa7.4□□□□□ -1.23
CDH1-205ENST00000562836 WDR38Q5JTN6 314 aa7.4□□□□□ -1.23
CDH1-205ENST00000562836 IER5LQ5T953 404 aa7.4□□□□□ -1.23
CDH1-205ENST00000562836 CNRIP1Q96F85 164 aaPredicted RBP7.4□□□□□ -1.23
CDH1-205ENST00000562836 MPDZO75970 2070 aa7.39□□□□□ -1.23
CDH1-205ENST00000562836 A0A087WWL8 130 aa7.39□□□□□ -1.23
CDH1-205ENST00000562836 C19orf71A6NCJ1 209 aa7.39□□□□□ -1.23
CDH1-205ENST00000562836 VPREB1P12018 145 aa7.39□□□□□ -1.23
CDH1-205ENST00000562836 FOXF2Q12947 444 aa7.39□□□□□ -1.23
CDH1-205ENST00000562836 C1orf140Q5VVS0 124 aa7.39□□□□□ -1.23
CDH1-205ENST00000562836 C1orf158Q8N1D5 194 aa7.39□□□□□ -1.23
CDH1-205ENST00000562836 SPANXDQ9BXN6 97 aa7.39□□□□□ -1.23
CDH1-205ENST00000562836 CACNA1DQ01668 2161 aa7.39□□□□□ -1.23
CDH1-205ENST00000562836 UBE2L5PA0A1B0GUS4 154 aa7.39□□□□□ -1.23
CDH1-205ENST00000562836 SMIM27A0A1W2PRY6 76 aa7.39□□□□□ -1.23
CDH1-205ENST00000562836 LGALS9O00182 355 aa7.39□□□□□ -1.23
CDH1-205ENST00000562836 FXYD4P59646 89 aa7.39□□□□□ -1.23
CDH1-205ENST00000562836 LY6G5BQ8NDX9 201 aa7.39□□□□□ -1.23
CDH1-205ENST00000562836 TAF15Q92804 592 aaKnown RBP eCLIP7.39□□□□□ -1.23
CDH1-205ENST00000562836 Q9Y3F1 56 aa7.39□□□□□ -1.23
CDH1-205ENST00000562836 TMEM131Q92545 1883 aa7.39□□□□□ -1.23
CDH1-205ENST00000562836 MGST3O14880 152 aa7.38□□□□□ -1.23
CDH1-205ENST00000562836 MRPS12O15235 138 aaKnown RBP7.38□□□□□ -1.23
CDH1-205ENST00000562836 NPYP01303 97 aa7.38□□□□□ -1.23
CDH1-205ENST00000562836 RPS27P42677 84 aaKnown RBP7.38□□□□□ -1.23
CDH1-205ENST00000562836 UBE2D3P61077 147 aa7.38□□□□□ -1.23
CDH1-205ENST00000562836 UBE2D2P62837 147 aa7.38□□□□□ -1.23
CDH1-205ENST00000562836 SRYQ05066 204 aa7.38□□□□□ -1.23
CDH1-205ENST00000562836 C1orf100Q5SVJ3 147 aa7.38□□□□□ -1.23
CDH1-205ENST00000562836 Q6ZVL8 140 aa7.38□□□□□ -1.23
CDH1-205ENST00000562836 PIFOQ8TCI5 191 aa7.38□□□□□ -1.23
CDH1-205ENST00000562836 ZNF503Q96F45 646 aa7.38□□□□□ -1.23
CDH1-205ENST00000562836 AICDAQ9GZX7 198 aa7.38□□□□□ -1.23
CDH1-205ENST00000562836 CXXC4Q9H2H0 198 aa7.38□□□□□ -1.23
CDH1-205ENST00000562836 ESPL1Q14674 2120 aa7.38□□□□□ -1.23
CDH1-205ENST00000562836 A0A0A6YYD4 124 aa7.38□□□□□ -1.23
CDH1-205ENST00000562836 CCL1P22362 96 aa7.38□□□□□ -1.23
CDH1-205ENST00000562836 RUSC1-AS1Q66K80 236 aa7.38□□□□□ -1.23
CDH1-205ENST00000562836 EEF1AKMT3Q96AZ1 226 aa7.38□□□□□ -1.23
CDH1-205ENST00000562836 HOXD3P31249 432 aaPredicted RBP7.37□□□□□ -1.23
CDH1-205ENST00000562836 SAA4P35542 130 aa7.37□□□□□ -1.23
CDH1-205ENST00000562836 CRIP2P52943 208 aaPredicted RBP7.37□□□□□ -1.23
CDH1-205ENST00000562836 SNRPD3P62318 126 aaKnown RBP7.37□□□□□ -1.23
CDH1-205ENST00000562836 LGALS9BQ3B8N2 356 aa7.37□□□□□ -1.23
CDH1-205ENST00000562836 ORMDL2Q53FV1 153 aa7.37□□□□□ -1.23
CDH1-205ENST00000562836 FHL5Q5TD97 284 aa7.37□□□□□ -1.23
CDH1-205ENST00000562836 ARHGAP5-AS1Q96IT6 56 aa7.37□□□□□ -1.23
CDH1-205ENST00000562836 AAMDCQ9H7C9 122 aa7.37□□□□□ -1.23
CDH1-205ENST00000562836 AGRNO00468 2067 aa7.37□□□□□ -1.23
CDH1-205ENST00000562836 IGHV3OR15-7A0A075B7D8 119 aa7.37□□□□□ -1.23
CDH1-205ENST00000562836 IGKV1D-8A0A087WSZ0 117 aa7.37□□□□□ -1.23
CDH1-205ENST00000562836 SMIM26A0A096LP01 95 aa7.37□□□□□ -1.23
CDH1-205ENST00000562836 ZNF22P17026 224 aaPredicted RBP7.37□□□□□ -1.23
CDH1-205ENST00000562836 ASPHD1Q5U4P2 390 aa7.37□□□□□ -1.23
CDH1-205ENST00000562836 LGALS9CQ6DKI2 356 aa7.37□□□□□ -1.23
CDH1-205ENST00000562836 MDP1Q86V88 176 aa7.37□□□□□ -1.23
CDH1-205ENST00000562836 NT5CQ8TCD5 201 aa7.37□□□□□ -1.23
CDH1-205ENST00000562836 TRGV9Q99603 122 aa7.37□□□□□ -1.23
CDH1-205ENST00000562836 UPK3BQ9BT76 320 aa7.37□□□□□ -1.23
CDH1-205ENST00000562836 CACNA1CQ13936 2221 aa7.37□□□□□ -1.23
CDH1-205ENST00000562836 KNCNA6PVL3 124 aa7.37□□□□□ -1.23
CDH1-205ENST00000562836 SRSF10O75494 262 aaKnown RBP7.37□□□□□ -1.23
CDH1-205ENST00000562836 IGKV1D-16P01601 117 aa7.37□□□□□ -1.23
CDH1-205ENST00000562836 INAFM2P0DMQ5 153 aa7.37□□□□□ -1.23
CDH1-205ENST00000562836 CRYGSP22914 178 aa7.37□□□□□ -1.23
CDH1-205ENST00000562836 UBE2L3P68036 154 aaKnown RBP7.37□□□□□ -1.23
CDH1-205ENST00000562836 MIC13Q5XKP0 118 aa7.37□□□□□ -1.23
CDH1-205ENST00000562836 SERP1Q9Y6X1 66 aa7.37□□□□□ -1.23
CDH1-205ENST00000562836 IGLV3-16A0A075B6K0 115 aa7.36□□□□□ -1.23
CDH1-205ENST00000562836 LOC105378220A0A1B0GUY1 285 aaPredicted RBP7.36□□□□□ -1.23
CDH1-205ENST00000562836 EPM2AB3EWF7 344 aa7.36□□□□□ -1.23
CDH1-205ENST00000562836 GATA1P15976 413 aaPredicted RBP7.36□□□□□ -1.23
CDH1-205ENST00000562836 CD52P31358 61 aa7.36□□□□□ -1.23
CDH1-205ENST00000562836 QRFPP83859 136 aa7.36□□□□□ -1.23
CDH1-205ENST00000562836 FAM168AQ92567 244 aa7.36□□□□□ -1.23
CDH1-205ENST00000562836 LIME1Q9H400 295 aa7.36□□□□□ -1.23
CDH1-205ENST00000562836 OSTCQ9NRP0 149 aa7.36□□□□□ -1.23
CDH1-205ENST00000562836 ATOX1O00244 68 aa7.36□□□□□ -1.23
CDH1-205ENST00000562836 SERTAD4-AS1Q5TG53 156 aa7.36□□□□□ -1.23
CDH1-205ENST00000562836 C11orf53Q8IXP5 236 aa7.36□□□□□ -1.23
CDH1-205ENST00000562836 ZNF784Q8NCA9 323 aaPredicted RBP7.36□□□□□ -1.23
CDH1-205ENST00000562836 HDHD3Q9BSH5 251 aaPredicted RBP7.36□□□□□ -1.23
CDH1-205ENST00000562836 LINC00474Q9P2X8 69 aa7.36□□□□□ -1.23
CDH1-205ENST00000562836 KIF26BQ2KJY2 2108 aa7.35□□□□□ -1.23
CDH1-205ENST00000562836 LINC01553A4QN01 128 aa7.35□□□□□ -1.23
CDH1-205ENST00000562836 Q6ZRU5 148 aa7.35□□□□□ -1.23
CDH1-205ENST00000562836 RALGAPA1Q6GYQ0 2036 aa7.35□□□□□ -1.23
CDH1-205ENST00000562836 COX5AP20674 150 aa7.35□□□□□ -1.23
CDH1-205ENST00000562836 DCANP1Q8TF63 244 aa7.35□□□□□ -1.23
CDH1-205ENST00000562836 ZNF837Q96EG3 531 aaPredicted RBP7.35□□□□□ -1.23
CDH1-205ENST00000562836 PRSS27Q9BQR3 290 aa7.35□□□□□ -1.23
CDH1-205ENST00000562836 LHFPL6Q9Y693 200 aa7.35□□□□□ -1.23
CDH1-205ENST00000562836 SRRM4A7MD48 611 aaKnown RBP7.34□□□□□ -1.23
CDH1-205ENST00000562836 C9JCJ5 164 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms