RNA–Protein interactions for RNA: ENST00000558314.5

TPM1-211, Transcript of tropomyosin 1, humanhuman

TSL 1 (best)

Gene TPM1, Length 1,031 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-211ENST00000558314 RCL1Q9Y2P8 373 aaKnown RBP11□□□□□ -0.65
TPM1-211ENST00000558314 A8MTW9 85 aa10.99□□□□□ -0.65
TPM1-211ENST00000558314 L7N2F9 121 aa10.99□□□□□ -0.65
TPM1-211ENST00000558314 CXCL3P19876 107 aa10.99□□□□□ -0.65
TPM1-211ENST00000558314 BCAP31P51572 246 aa10.99□□□□□ -0.65
TPM1-211ENST00000558314 VAMP2P63027 116 aa10.99□□□□□ -0.65
TPM1-211ENST00000558314 TMEM14EPQ6UXP3 125 aa10.99□□□□□ -0.65
TPM1-211ENST00000558314 PATE2Q6UY27 113 aa10.99□□□□□ -0.65
TPM1-211ENST00000558314 RPUSD4Q96CM3 377 aaKnown RBP10.99□□□□□ -0.65
TPM1-211ENST00000558314 BATF3Q9NR55 127 aa10.99□□□□□ -0.65
TPM1-211ENST00000558314 LSM5Q9Y4Y9 91 aaKnown RBP10.99□□□□□ -0.65
TPM1-211ENST00000558314 A0A1B0GVY2 172 aa10.98□□□□□ -0.65
TPM1-211ENST00000558314 LYRM9A8MSI8 78 aa10.98□□□□□ -0.65
TPM1-211ENST00000558314 COX7A2P2O60397 106 aa10.98□□□□□ -0.65
TPM1-211ENST00000558314 SOHLH1Q5JUK2 328 aa10.98□□□□□ -0.65
TPM1-211ENST00000558314 LINC00305Q7Z4B0 112 aa10.98□□□□□ -0.65
TPM1-211ENST00000558314 KIAA1109Q2LD37 5005 aa10.98□□□□□ -0.65
TPM1-211ENST00000558314 J3KRW8 73 aa10.97□□□□□ -0.65
TPM1-211ENST00000558314 BTCP35070 178 aa10.97□□□□□ -0.65
TPM1-211ENST00000558314 PLP1P60201 277 aa10.97□□□□□ -0.65
TPM1-211ENST00000558314 B2MP61769 119 aa10.97□□□□□ -0.65
TPM1-211ENST00000558314 ARL16Q0P5N6 197 aa10.97□□□□□ -0.65
TPM1-211ENST00000558314 ZNF846Q147U1 533 aa10.97□□□□□ -0.65
TPM1-211ENST00000558314 RNF212Q495C1 297 aa10.97□□□□□ -0.65
TPM1-211ENST00000558314 ZNF546Q86UE3 836 aa10.97□□□□□ -0.65
TPM1-211ENST00000558314 PARD6GQ9BYG4 376 aaPredicted RBP10.97□□□□□ -0.65
TPM1-211ENST00000558314 A0A087X0K7 114 aa10.96□□□□□ -0.65
TPM1-211ENST00000558314 AGPAT2O15120 278 aa10.96□□□□□ -0.65
TPM1-211ENST00000558314 TSC22D2O75157 780 aa10.96□□□□□ -0.65
TPM1-211ENST00000558314 MBPP02686 304 aaPredicted RBP10.96□□□□□ -0.65
TPM1-211ENST00000558314 IL7P13232 177 aa10.96□□□□□ -0.65
TPM1-211ENST00000558314 C1orf134Q5TEV5 83 aa10.96□□□□□ -0.65
TPM1-211ENST00000558314 C15orf53Q8NAA6 179 aa10.96□□□□□ -0.65
TPM1-211ENST00000558314 SDHCQ99643 169 aaPredicted RBP10.96□□□□□ -0.65
TPM1-211ENST00000558314 TRAV6A0A075B6T7 132 aa10.95□□□□□ -0.66
TPM1-211ENST00000558314 C7orf66A4D0T2 115 aa10.95□□□□□ -0.66
TPM1-211ENST00000558314 C5orf51A6NDU8 294 aa10.95□□□□□ -0.66
TPM1-211ENST00000558314 ATP5G1P05496 136 aa10.95□□□□□ -0.66
TPM1-211ENST00000558314 ATP5G3P48201 142 aa10.95□□□□□ -0.66
TPM1-211ENST00000558314 CAV2P51636 162 aa10.95□□□□□ -0.66
TPM1-211ENST00000558314 TAS2R60P59551 318 aa10.95□□□□□ -0.66
TPM1-211ENST00000558314 Q6ZR54 194 aa10.95□□□□□ -0.66
TPM1-211ENST00000558314 MITD1Q8WV92 249 aa10.95□□□□□ -0.66
TPM1-211ENST00000558314 MGST2Q99735 147 aa10.95□□□□□ -0.66
TPM1-211ENST00000558314 C20orf85Q9H1P6 137 aa10.95□□□□□ -0.66
TPM1-211ENST00000558314 NOP10Q9NPE3 64 aaKnown RBP10.95□□□□□ -0.66
TPM1-211ENST00000558314 FNDC10F2Z333 226 aa10.94□□□□□ -0.66
TPM1-211ENST00000558314 CST7O76096 145 aa10.94□□□□□ -0.66
TPM1-211ENST00000558314 CDKN1BP46527 198 aa10.94□□□□□ -0.66
TPM1-211ENST00000558314 TAS2R30P59541 319 aa10.94□□□□□ -0.66
TPM1-211ENST00000558314 C10orf113Q5VZT2 155 aa10.94□□□□□ -0.66
TPM1-211ENST00000558314 LCN15Q6UWW0 184 aa10.94□□□□□ -0.66
TPM1-211ENST00000558314 BPIFA4PQ86YQ2 179 aa10.94□□□□□ -0.66
TPM1-211ENST00000558314 TMEM256Q8N2U0 113 aa10.94□□□□□ -0.66
TPM1-211ENST00000558314 OR10J6PQ8NGY7 276 aa10.94□□□□□ -0.66
TPM1-211ENST00000558314 C16orf74Q96GX8 76 aa10.94□□□□□ -0.66
TPM1-211ENST00000558314 SEC22CQ9BRL7 303 aa10.94□□□□□ -0.66
TPM1-211ENST00000558314 RNF24Q9Y225 148 aa10.94□□□□□ -0.66
TPM1-211ENST00000558314 PLAC8L1A1L4L8 177 aa10.93□□□□□ -0.66
TPM1-211ENST00000558314 PRAC2D3DTV9 90 aa10.93□□□□□ -0.66
TPM1-211ENST00000558314 SLC17A3O00476 420 aa10.93□□□□□ -0.66
TPM1-211ENST00000558314 MRPS12O15235 138 aaKnown RBP10.93□□□□□ -0.66
TPM1-211ENST00000558314 TSPOP30536 169 aa10.93□□□□□ -0.66
TPM1-211ENST00000558314 CAMLGP49069 296 aa10.93□□□□□ -0.66
TPM1-211ENST00000558314 S100A10P60903 97 aa10.93□□□□□ -0.66
TPM1-211ENST00000558314 OR5I1Q13606 314 aa10.93□□□□□ -0.66
TPM1-211ENST00000558314 CLINT1Q14677 625 aa10.93□□□□□ -0.66
TPM1-211ENST00000558314 KIR3DS1Q14943 382 aa10.93□□□□□ -0.66
TPM1-211ENST00000558314 OPCMLQ14982 345 aa10.93□□□□□ -0.66
TPM1-211ENST00000558314 PXDC1Q5TGL8 231 aa10.93□□□□□ -0.66
TPM1-211ENST00000558314 MORN5Q5VZ52 161 aa10.93□□□□□ -0.66
TPM1-211ENST00000558314 LINC00299Q6ZSB3 139 aa10.93□□□□□ -0.66
TPM1-211ENST00000558314 ZNF575Q86XF7 245 aa10.93□□□□□ -0.66
TPM1-211ENST00000558314 SLC50A1Q9BRV3 221 aa10.93□□□□□ -0.66
TPM1-211ENST00000558314 ZNF331Q9NQX6 463 aaPredicted RBP10.93□□□□□ -0.66
TPM1-211ENST00000558314 TIMM8BQ9Y5J9 83 aaPredicted RBP10.93□□□□□ -0.66
TPM1-211ENST00000558314 TRAV5A0A0B4J249 113 aa10.92□□□□□ -0.66
TPM1-211ENST00000558314 FAM24AA6NFZ4 105 aa10.92□□□□□ -0.66
TPM1-211ENST00000558314 K7EPK0 472 aa10.92□□□□□ -0.66
TPM1-211ENST00000558314 LYRM1O43325 122 aa10.92□□□□□ -0.66
TPM1-211ENST00000558314 MED14OSP0DP75 135 aa10.92□□□□□ -0.66
TPM1-211ENST00000558314 RAB31Q13636 194 aa10.92□□□□□ -0.66
TPM1-211ENST00000558314 MIC13Q5XKP0 118 aa10.92□□□□□ -0.66
TPM1-211ENST00000558314 Q6ZRG5 221 aa10.92□□□□□ -0.66
TPM1-211ENST00000558314 NRARPQ7Z6K4 114 aa10.92□□□□□ -0.66
TPM1-211ENST00000558314 CCDC28AQ8IWP9 274 aa10.92□□□□□ -0.66
TPM1-211ENST00000558314 TMEM37Q8WXS4 190 aa10.92□□□□□ -0.66
TPM1-211ENST00000558314 GGACTQ9BVM4 153 aa10.92□□□□□ -0.66
TPM1-211ENST00000558314 DNAH2Q9P225 4427 aa10.92□□□□□ -0.66
TPM1-211ENST00000558314 A6NHS1 94 aa10.91□□□□□ -0.66
TPM1-211ENST00000558314 CBY3A6NI87 242 aa10.91□□□□□ -0.66
TPM1-211ENST00000558314 H7BYZ3 331 aa10.91□□□□□ -0.66
TPM1-211ENST00000558314 CXCL2P19875 107 aa10.91□□□□□ -0.66
TPM1-211ENST00000558314 CCL18P55774 89 aa10.91□□□□□ -0.66
TPM1-211ENST00000558314 BAXQ07812 192 aa10.91□□□□□ -0.66
TPM1-211ENST00000558314 NACAE9PAV3 2078 aa10.91□□□□□ -0.66
TPM1-211ENST00000558314 FAT2Q9NYQ8 4349 aa10.9□□□□□ -0.66
TPM1-211ENST00000558314 DNAH17Q9UFH2 4485 aa10.9□□□□□ -0.66
TPM1-211ENST00000558314 A0A0J9YY99 117 aa10.9□□□□□ -0.66
TPM1-211ENST00000558314 UBE2L5PA0A1B0GUS4 154 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms