RNA–Protein interactions for RNA: ENST00000557329.1

CHD8-212, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-212ENST00000557329 IGLC7A0M8Q6 106 aa2.32□□□□□ -2.04
CHD8-212ENST00000557329 RBFOX3A6NFN3 312 aa2.32□□□□□ -2.04
CHD8-212ENST00000557329 F6UB75 175 aa2.32□□□□□ -2.04
CHD8-212ENST00000557329 K7EIM0 57 aa2.32□□□□□ -2.04
CHD8-212ENST00000557329 SULT1C2O00338 296 aa2.32□□□□□ -2.04
CHD8-212ENST00000557329 UPK2O00526 184 aa2.32□□□□□ -2.04
CHD8-212ENST00000557329 MFNGO00587 321 aa2.32□□□□□ -2.04
CHD8-212ENST00000557329 SCGB2A1O75556 95 aa2.32□□□□□ -2.04
CHD8-212ENST00000557329 ADAP1O75689 374 aa2.32□□□□□ -2.04
CHD8-212ENST00000557329 NAPSAO96009 420 aa2.32□□□□□ -2.04
CHD8-212ENST00000557329 HLA-DRB4P13762 266 aa2.32□□□□□ -2.04
CHD8-212ENST00000557329 CDKN1BP46527 198 aa2.32□□□□□ -2.04
CHD8-212ENST00000557329 RORCP51449 518 aa2.32□□□□□ -2.04
CHD8-212ENST00000557329 RHOBP62745 196 aa2.32□□□□□ -2.04
CHD8-212ENST00000557329 WT1-ASQ06250 92 aa2.32□□□□□ -2.04
CHD8-212ENST00000557329 MRPL28Q13084 256 aaKnown RBP2.32□□□□□ -2.04
CHD8-212ENST00000557329 UNC119Q13432 240 aa2.32□□□□□ -2.04
CHD8-212ENST00000557329 YIF1BQ5BJH7 314 aa2.32□□□□□ -2.04
CHD8-212ENST00000557329 SPINK9Q5DT21 86 aa2.32□□□□□ -2.04
CHD8-212ENST00000557329 LELP1Q5T871 98 aa2.32□□□□□ -2.04
CHD8-212ENST00000557329 FAM78BQ5VT40 261 aa2.32□□□□□ -2.04
CHD8-212ENST00000557329 RPL22L1Q6P5R6 122 aaKnown RBP2.32□□□□□ -2.04
CHD8-212ENST00000557329 ZNF880Q6PDB4 577 aa2.32□□□□□ -2.04
CHD8-212ENST00000557329 TMPRSS11AQ6ZMR5 421 aa2.32□□□□□ -2.04
CHD8-212ENST00000557329 Q6ZRN7 208 aaPredicted RBP2.32□□□□□ -2.04
CHD8-212ENST00000557329 SCXQ7RTU7 201 aa2.32□□□□□ -2.04
CHD8-212ENST00000557329 PUSL1Q8N0Z8 303 aaKnown RBP2.32□□□□□ -2.04
CHD8-212ENST00000557329 TMEM252Q8N6L7 170 aa2.32□□□□□ -2.04
CHD8-212ENST00000557329 Q8N814 137 aa2.32□□□□□ -2.04
CHD8-212ENST00000557329 BPIFB6Q8NFQ5 453 aa2.32□□□□□ -2.04
CHD8-212ENST00000557329 OR1L8Q8NGR8 309 aa2.32□□□□□ -2.04
CHD8-212ENST00000557329 OR10J6PQ8NGY7 276 aa2.32□□□□□ -2.04
CHD8-212ENST00000557329 DCANP1Q8TF63 244 aa2.32□□□□□ -2.04
CHD8-212ENST00000557329 DNAJC9Q8WXX5 260 aa2.32□□□□□ -2.04
CHD8-212ENST00000557329 PPP1R14BQ96C90 147 aa2.32□□□□□ -2.04
CHD8-212ENST00000557329 TMEM56Q96MV1 263 aa2.32□□□□□ -2.04
CHD8-212ENST00000557329 UPK3BQ9BT76 320 aa2.32□□□□□ -2.04
CHD8-212ENST00000557329 VSIRQ9H7M9 311 aa2.32□□□□□ -2.04
CHD8-212ENST00000557329 PLGRKTQ9HBL7 147 aa2.32□□□□□ -2.04
CHD8-212ENST00000557329 HLA-DRB4X5D2U9 266 aa2.32□□□□□ -2.04
CHD8-212ENST00000557329 FSIP2Q5CZC0 6907 aa2.32□□□□□ -2.04
CHD8-212ENST00000557329 TRGV2A0A075B6R0 118 aa2.31□□□□□ -2.04
CHD8-212ENST00000557329 TRAV12-2A0A075B6T6 113 aa2.31□□□□□ -2.04
CHD8-212ENST00000557329 TRBV6-7A0A0A0MS04 114 aa2.31□□□□□ -2.04
CHD8-212ENST00000557329 ZNF701M0R085 212 aaPredicted RBP2.31□□□□□ -2.04
CHD8-212ENST00000557329 M0R2Z0 102 aa2.31□□□□□ -2.04
CHD8-212ENST00000557329 DENRO43583 198 aaKnown RBP2.31□□□□□ -2.04
CHD8-212ENST00000557329 KRASP01116 189 aa2.31□□□□□ -2.04
CHD8-212ENST00000557329 RLN2P04090 185 aa2.31□□□□□ -2.04
CHD8-212ENST00000557329 CRYGDP07320 174 aa2.31□□□□□ -2.04
CHD8-212ENST00000557329 UBBP0CG47 229 aa2.31□□□□□ -2.04
CHD8-212ENST00000557329 NQO2P16083 231 aa2.31□□□□□ -2.04
CHD8-212ENST00000557329 CELP19835 753 aa2.31□□□□□ -2.04
CHD8-212ENST00000557329 CAV2P51636 162 aa2.31□□□□□ -2.04
CHD8-212ENST00000557329 HNRNPA3P51991 378 aaKnown RBP2.31□□□□□ -2.04
CHD8-212ENST00000557329 FXYD4P59646 89 aa2.31□□□□□ -2.04
CHD8-212ENST00000557329 ERHP84090 104 aaKnown RBP2.31□□□□□ -2.04
CHD8-212ENST00000557329 TMED1Q13445 227 aa2.31□□□□□ -2.04
CHD8-212ENST00000557329 SPINK13Q1W4C9 94 aa2.31□□□□□ -2.04
CHD8-212ENST00000557329 ACOT6Q3I5F7 207 aaPredicted RBP2.31□□□□□ -2.04
CHD8-212ENST00000557329 Q499Y3 187 aa2.31□□□□□ -2.04
CHD8-212ENST00000557329 ACSM3Q53FZ2 586 aa2.31□□□□□ -2.04
CHD8-212ENST00000557329 RBM48Q5RL73 367 aaKnown RBP2.31□□□□□ -2.04
CHD8-212ENST00000557329 KDM4DQ6B0I6 523 aa2.31□□□□□ -2.04
CHD8-212ENST00000557329 XAF1Q6GPH4 301 aa2.31□□□□□ -2.04
CHD8-212ENST00000557329 SFXN4Q6P4A7 337 aa2.31□□□□□ -2.04
CHD8-212ENST00000557329 TMEM144Q7Z5S9 345 aa2.31□□□□□ -2.04
CHD8-212ENST00000557329 SYS1Q8N2H4 156 aa2.31□□□□□ -2.04
CHD8-212ENST00000557329 OR56B1Q8NGI3 324 aa2.31□□□□□ -2.04
CHD8-212ENST00000557329 OR51H1Q8NH63 302 aa2.31□□□□□ -2.04
CHD8-212ENST00000557329 Q8WTZ3 238 aa2.31□□□□□ -2.04
CHD8-212ENST00000557329 LSM10Q969L4 123 aaKnown RBP2.31□□□□□ -2.04
CHD8-212ENST00000557329 FAM104AQ969W3 186 aa2.31□□□□□ -2.04
CHD8-212ENST00000557329 PGLYRP3Q96LB9 341 aa2.31□□□□□ -2.04
CHD8-212ENST00000557329 IGF2BP2-AS1Q96M15 143 aa2.31□□□□□ -2.04
CHD8-212ENST00000557329 DERL3Q96Q80 235 aa2.31□□□□□ -2.04
CHD8-212ENST00000557329 HSD17B10Q99714 261 aaKnown RBP2.31□□□□□ -2.04
CHD8-212ENST00000557329 CIB1Q99828 191 aa2.31□□□□□ -2.04
CHD8-212ENST00000557329 SPXQ9BT56 116 aa2.31□□□□□ -2.04
CHD8-212ENST00000557329 PECRQ9BY49 303 aa2.31□□□□□ -2.04
CHD8-212ENST00000557329 SAV1Q9H4B6 383 aaPredicted RBP2.31□□□□□ -2.04
CHD8-212ENST00000557329 ZNF331Q9NQX6 463 aaPredicted RBP2.31□□□□□ -2.04
CHD8-212ENST00000557329 RBMX2Q9Y388 322 aaKnown RBP2.31□□□□□ -2.04
CHD8-212ENST00000557329 TIMM8BQ9Y5J9 83 aaPredicted RBP2.31□□□□□ -2.04
CHD8-212ENST00000557329 ORC6Q9Y5N6 252 aa2.31□□□□□ -2.04
CHD8-212ENST00000557329 IGKV2-28A0A075B6P5 120 aa2.3□□□□□ -2.04
CHD8-212ENST00000557329 A0A0J9YXY3 114 aa2.3□□□□□ -2.04
CHD8-212ENST00000557329 RNF222A6NCQ9 220 aa2.3□□□□□ -2.04
CHD8-212ENST00000557329 ZNF98A6NK75 572 aa2.3□□□□□ -2.04
CHD8-212ENST00000557329 FKBP6O75344 327 aa2.3□□□□□ -2.04
CHD8-212ENST00000557329 CCNKO75909 580 aa2.3□□□□□ -2.04
CHD8-212ENST00000557329 TMEM50AO95807 157 aa2.3□□□□□ -2.04
CHD8-212ENST00000557329 HPRT1P00492 218 aa2.3□□□□□ -2.04
CHD8-212ENST00000557329 INSP01308 110 aa2.3□□□□□ -2.04
CHD8-212ENST00000557329 IGKV2D-28P01615 120 aa2.3□□□□□ -2.04
CHD8-212ENST00000557329 IGHV3-53P01767 116 aa2.3□□□□□ -2.04
CHD8-212ENST00000557329 MYL12AP19105 171 aa2.3□□□□□ -2.04
CHD8-212ENST00000557329 PRDX6P30041 224 aa2.3□□□□□ -2.04
CHD8-212ENST00000557329 G6PCP35575 357 aa2.3□□□□□ -2.04
CHD8-212ENST00000557329 SNCAP37840 140 aa2.3□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms