RNA–Protein interactions for RNA: ENST00000556534.1

SCFD1-221, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 864 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-221ENST00000556534 MED12LQ86YW9 2145 aa1.42□□□□□ -2.18
SCFD1-221ENST00000556534 ZC3H13Q5T200 1668 aaKnown RBP1.42□□□□□ -2.18
SCFD1-221ENST00000556534 SCAPERQ9BY12 1400 aa1.41□□□□□ -2.18
SCFD1-221ENST00000556534 YTHDC2Q9H6S0 1430 aaKnown RBP1.41□□□□□ -2.18
SCFD1-221ENST00000556534 WDFY4Q6ZS81 3184 aa1.41□□□□□ -2.18
SCFD1-221ENST00000556534 TULP4Q9NRJ4 1543 aa1.41□□□□□ -2.18
SCFD1-221ENST00000556534 MROH1Q8NDA8 1641 aa1.41□□□□□ -2.18
SCFD1-221ENST00000556534 USP32Q8NFA0 1604 aa1.41□□□□□ -2.18
SCFD1-221ENST00000556534 TNS1Q9HBL0 1735 aaKnown RBP1.41□□□□□ -2.18
SCFD1-221ENST00000556534 CEP290O15078 2479 aa1.41□□□□□ -2.18
SCFD1-221ENST00000556534 CEP192Q8TEP8 1941 aa1.41□□□□□ -2.18
SCFD1-221ENST00000556534 A0A1B0GV72 72 aa1.41□□□□□ -2.18
SCFD1-221ENST00000556534 C7orf71A4D174 169 aa1.41□□□□□ -2.18
SCFD1-221ENST00000556534 CRPP02741 224 aa1.41□□□□□ -2.18
SCFD1-221ENST00000556534 ASAH2BP0C7U1 165 aa1.41□□□□□ -2.18
SCFD1-221ENST00000556534 ZNF705BP0CI00 300 aaPredicted RBP1.41□□□□□ -2.18
SCFD1-221ENST00000556534 NFYBP25208 207 aa1.41□□□□□ -2.18
SCFD1-221ENST00000556534 AKR1C3P42330 323 aa1.41□□□□□ -2.18
SCFD1-221ENST00000556534 UBE2BP63146 152 aa1.41□□□□□ -2.18
SCFD1-221ENST00000556534 BRMS1LQ5PSV4 323 aa1.41□□□□□ -2.18
SCFD1-221ENST00000556534 BCL2L15Q5TBC7 163 aa1.41□□□□□ -2.18
SCFD1-221ENST00000556534 C22orf39Q6P5X5 142 aa1.41□□□□□ -2.18
SCFD1-221ENST00000556534 FP248Q71RG6 208 aaPredicted RBP1.41□□□□□ -2.18
SCFD1-221ENST00000556534 PDZD9Q8IXQ8 264 aa1.41□□□□□ -2.18
SCFD1-221ENST00000556534 CANT1Q8WVQ1 401 aa1.41□□□□□ -2.18
SCFD1-221ENST00000556534 CARD19Q96LW7 228 aa1.41□□□□□ -2.18
SCFD1-221ENST00000556534 PRADC1Q9BSG0 188 aa1.41□□□□□ -2.18
SCFD1-221ENST00000556534 OR2J1Q9GZK6 312 aa1.41□□□□□ -2.18
SCFD1-221ENST00000556534 MRPL40Q9NQ50 206 aaKnown RBP1.41□□□□□ -2.18
SCFD1-221ENST00000556534 TAS2R4Q9NYW5 299 aa1.41□□□□□ -2.18
SCFD1-221ENST00000556534 CCDC88BA6NC98 1476 aa1.41□□□□□ -2.18
SCFD1-221ENST00000556534 PZPP20742 1482 aa1.41□□□□□ -2.18
SCFD1-221ENST00000556534 HTTP42858 3142 aa1.41□□□□□ -2.18
SCFD1-221ENST00000556534 ANKRD31Q8N7Z5 1873 aa1.41□□□□□ -2.18
SCFD1-221ENST00000556534 PLXNA4Q9HCM2 1894 aa1.41□□□□□ -2.18
SCFD1-221ENST00000556534 CDH23Q9H251 3354 aa1.41□□□□□ -2.18
SCFD1-221ENST00000556534 ASXL1Q8IXJ9 1541 aa1.4□□□□□ -2.18
SCFD1-221ENST00000556534 USP24Q9UPU5 2620 aa1.4□□□□□ -2.18
SCFD1-221ENST00000556534 NUP210Q8TEM1 1887 aaPredicted RBP1.4□□□□□ -2.19
SCFD1-221ENST00000556534 TET3O43151 1660 aa1.4□□□□□ -2.19
SCFD1-221ENST00000556534 COL4A1P02462 1669 aa1.4□□□□□ -2.19
SCFD1-221ENST00000556534 ADGRB2O60241 1585 aa1.4□□□□□ -2.19
SCFD1-221ENST00000556534 MAST1Q9Y2H9 1570 aa1.4□□□□□ -2.19
SCFD1-221ENST00000556534 MEIKINA0A087WXM9 373 aa1.4□□□□□ -2.19
SCFD1-221ENST00000556534 CRHP06850 196 aa1.4□□□□□ -2.19
SCFD1-221ENST00000556534 MGST1P10620 155 aaKnown RBP1.4□□□□□ -2.19
SCFD1-221ENST00000556534 MIFP14174 115 aa1.4□□□□□ -2.19
SCFD1-221ENST00000556534 SSR2P43308 183 aa1.4□□□□□ -2.19
SCFD1-221ENST00000556534 DYNLT3P51808 116 aa1.4□□□□□ -2.19
SCFD1-221ENST00000556534 RHOGP84095 191 aa1.4□□□□□ -2.19
SCFD1-221ENST00000556534 SCGB2B2Q4G0G5 96 aa1.4□□□□□ -2.19
SCFD1-221ENST00000556534 RNASE10Q5GAN6 216 aaKnown RBP1.4□□□□□ -2.19
SCFD1-221ENST00000556534 Q8IYB0 196 aa1.4□□□□□ -2.19
SCFD1-221ENST00000556534 SLC30A7Q8NEW0 376 aa1.4□□□□□ -2.19
SCFD1-221ENST00000556534 OR10K1Q8NGX5 313 aa1.4□□□□□ -2.19
SCFD1-221ENST00000556534 OR2T10Q8NGZ9 312 aa1.4□□□□□ -2.19
SCFD1-221ENST00000556534 MALSU1Q96EH3 234 aa1.4□□□□□ -2.19
SCFD1-221ENST00000556534 GPER1Q99527 375 aa1.4□□□□□ -2.19
SCFD1-221ENST00000556534 BCL2L10Q9HD36 194 aa1.4□□□□□ -2.19
SCFD1-221ENST00000556534 OR52A1Q9UKL2 312 aa1.4□□□□□ -2.19
SCFD1-221ENST00000556534 SMG1Q96Q15 3661 aaKnown RBP1.4□□□□□ -2.19
SCFD1-221ENST00000556534 KALRNO60229 2985 aa1.4□□□□□ -2.19
SCFD1-221ENST00000556534 DMDP11532 3685 aa1.39□□□□□ -2.19
SCFD1-221ENST00000556534 PRRC2BQ5JSZ5 2229 aaKnown RBP1.39□□□□□ -2.19
SCFD1-221ENST00000556534 UGGT1Q9NYU2 1555 aa1.39□□□□□ -2.19
SCFD1-221ENST00000556534 ITPR3Q14573 2671 aa1.39□□□□□ -2.19
SCFD1-221ENST00000556534 NKTRP30414 1462 aaKnown RBP1.39□□□□□ -2.19
SCFD1-221ENST00000556534 NLRP1Q9C000 1473 aa1.39□□□□□ -2.19
SCFD1-221ENST00000556534 ABCA12Q86UK0 2595 aa1.39□□□□□ -2.19
SCFD1-221ENST00000556534 TPRP12270 2363 aaKnown RBP1.39□□□□□ -2.19
SCFD1-221ENST00000556534 TRGV10A0A0A0MS01 117 aa1.39□□□□□ -2.19
SCFD1-221ENST00000556534 MAP1LC3B2A6NCE7 125 aa1.39□□□□□ -2.19
SCFD1-221ENST00000556534 NDUFB3O43676 98 aa1.39□□□□□ -2.19
SCFD1-221ENST00000556534 GGCTO75223 188 aaKnown RBP1.39□□□□□ -2.19
SCFD1-221ENST00000556534 TRGC2P03986 189 aa1.39□□□□□ -2.19
SCFD1-221ENST00000556534 ESRGQ1W209 222 aa1.39□□□□□ -2.19
SCFD1-221ENST00000556534 SPANXN5Q5MJ07 72 aa1.39□□□□□ -2.19
SCFD1-221ENST00000556534 DCUN1D2Q6PH85 259 aa1.39□□□□□ -2.19
SCFD1-221ENST00000556534 SMIM15Q7Z3B0 74 aa1.39□□□□□ -2.19
SCFD1-221ENST00000556534 FAM24BQ8N5W8 94 aa1.39□□□□□ -2.19
SCFD1-221ENST00000556534 NUP35Q8NFH5 326 aa1.39□□□□□ -2.19
SCFD1-221ENST00000556534 ZNF418Q8TF45 676 aaPredicted RBP1.39□□□□□ -2.19
SCFD1-221ENST00000556534 YPEL2Q96QA6 119 aa1.39□□□□□ -2.19
SCFD1-221ENST00000556534 TMEM70Q9BUB7 260 aa1.39□□□□□ -2.19
SCFD1-221ENST00000556534 DDA1Q9BW61 102 aa1.39□□□□□ -2.19
SCFD1-221ENST00000556534 MAP1LC3BQ9GZQ8 125 aa1.39□□□□□ -2.19
SCFD1-221ENST00000556534 PRO3102Q9H379 93 aa1.39□□□□□ -2.19
SCFD1-221ENST00000556534 TRPM1Q7Z4N2 1603 aa1.39□□□□□ -2.19
SCFD1-221ENST00000556534 NCOR1O75376 2440 aa1.39□□□□□ -2.19
SCFD1-221ENST00000556534 SPEGQ15772 3267 aa1.39□□□□□ -2.19
SCFD1-221ENST00000556534 ACACBO00763 2458 aa1.39□□□□□ -2.19
SCFD1-221ENST00000556534 DOPEY1Q5JWR5 2465 aa1.39□□□□□ -2.19
SCFD1-221ENST00000556534 KDM5AP29375 1690 aaKnown RBP1.39□□□□□ -2.19
SCFD1-221ENST00000556534 MYO15AQ9UKN7 3530 aa1.39□□□□□ -2.19
SCFD1-221ENST00000556534 TENM1Q9UKZ4 2725 aa1.38□□□□□ -2.19
SCFD1-221ENST00000556534 CFAP74Q9C0B2 1584 aa1.38□□□□□ -2.19
SCFD1-221ENST00000556534 MYOM2P54296 1465 aa1.38□□□□□ -2.19
SCFD1-221ENST00000556534 MLH3Q9UHC1 1453 aa1.38□□□□□ -2.19
SCFD1-221ENST00000556534 TRBV6-5A0A0K0K1A5 114 aa1.38□□□□□ -2.19
SCFD1-221ENST00000556534 A0A1W2PRE2 83 aa1.38□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms