RNA–Protein interactions for RNA: ENST00000556433.5

ACTN1-220, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-220ENST00000556433 IL7P13232 177 aa15.99■□□□□ 0.15
ACTN1-220ENST00000556433 CNPY1Q3B7I2 92 aa15.99■□□□□ 0.15
ACTN1-220ENST00000556433 RNF212Q495C1 297 aa15.99■□□□□ 0.15
ACTN1-220ENST00000556433 RNF24Q9Y225 148 aa15.99■□□□□ 0.15
ACTN1-220ENST00000556433 RCL1Q9Y2P8 373 aaKnown RBP15.99■□□□□ 0.15
ACTN1-220ENST00000556433 DNAH2Q9P225 4427 aa15.99■□□□□ 0.15
ACTN1-220ENST00000556433 FAT2Q9NYQ8 4349 aa15.98■□□□□ 0.15
ACTN1-220ENST00000556433 A0A1B0GVY2 172 aa15.98■□□□□ 0.15
ACTN1-220ENST00000556433 LYRM9A8MSI8 78 aa15.98■□□□□ 0.15
ACTN1-220ENST00000556433 ARL16Q0P5N6 197 aa15.98■□□□□ 0.15
ACTN1-220ENST00000556433 LINC01587Q99440 93 aa15.98■□□□□ 0.15
ACTN1-220ENST00000556433 MBPP02686 304 aaPredicted RBP15.97■□□□□ 0.15
ACTN1-220ENST00000556433 DEFB130BP0DP73 79 aa15.97■□□□□ 0.15
ACTN1-220ENST00000556433 DEFB130AP0DP74 79 aa15.97■□□□□ 0.15
ACTN1-220ENST00000556433 PRB4P10163 310 aaPredicted RBP15.97■□□□□ 0.15
ACTN1-220ENST00000556433 AZU1P20160 251 aa15.97■□□□□ 0.15
ACTN1-220ENST00000556433 PXDC1Q5TGL8 231 aa15.97■□□□□ 0.15
ACTN1-220ENST00000556433 ZNF546Q86UE3 836 aa15.97■□□□□ 0.15
ACTN1-220ENST00000556433 GGACTQ9BVM4 153 aa15.97■□□□□ 0.15
ACTN1-220ENST00000556433 C7orf66A4D0T2 115 aa15.96■□□□□ 0.15
ACTN1-220ENST00000556433 AGPAT2O15120 278 aa15.96■□□□□ 0.15
ACTN1-220ENST00000556433 MRPS12O15235 138 aaKnown RBP15.96■□□□□ 0.15
ACTN1-220ENST00000556433 TSPOP30536 169 aa15.96■□□□□ 0.15
ACTN1-220ENST00000556433 LINC00305Q7Z4B0 112 aa15.96■□□□□ 0.15
ACTN1-220ENST00000556433 RPUSD4Q96CM3 377 aaKnown RBP15.96■□□□□ 0.15
ACTN1-220ENST00000556433 KIAA1109Q2LD37 5005 aa15.96■□□□□ 0.15
ACTN1-220ENST00000556433 L7N2F9 121 aa15.95■□□□□ 0.14
ACTN1-220ENST00000556433 SNRPCP09234 159 aaKnown RBP15.95■□□□□ 0.14
ACTN1-220ENST00000556433 VAMP2P63027 116 aa15.95■□□□□ 0.14
ACTN1-220ENST00000556433 FCN2Q15485 313 aa15.95■□□□□ 0.14
ACTN1-220ENST00000556433 Q6ZR54 194 aa15.95■□□□□ 0.14
ACTN1-220ENST00000556433 CCSO14618 274 aa15.94■□□□□ 0.14
ACTN1-220ENST00000556433 PLA2G10O15496 165 aa15.94■□□□□ 0.14
ACTN1-220ENST00000556433 HTN1P15515 57 aa15.94■□□□□ 0.14
ACTN1-220ENST00000556433 ZNF846Q147U1 533 aa15.94■□□□□ 0.14
ACTN1-220ENST00000556433 TMEM256Q8N2U0 113 aa15.94■□□□□ 0.14
ACTN1-220ENST00000556433 C15orf53Q8NAA6 179 aa15.94■□□□□ 0.14
ACTN1-220ENST00000556433 C20orf85Q9H1P6 137 aa15.94■□□□□ 0.14
ACTN1-220ENST00000556433 PLAC8L1A1L4L8 177 aa15.93■□□□□ 0.14
ACTN1-220ENST00000556433 COX7A2P2O60397 106 aa15.93■□□□□ 0.14
ACTN1-220ENST00000556433 CXCL2P19875 107 aa15.93■□□□□ 0.14
ACTN1-220ENST00000556433 TAS2R60P59551 318 aa15.93■□□□□ 0.14
ACTN1-220ENST00000556433 LCN15Q6UWW0 184 aa15.93■□□□□ 0.14
ACTN1-220ENST00000556433 MGST2Q99735 147 aa15.93■□□□□ 0.14
ACTN1-220ENST00000556433 ZNF331Q9NQX6 463 aaPredicted RBP15.93■□□□□ 0.14
ACTN1-220ENST00000556433 FAM25EA8MYX2 175 aa15.92■□□□□ 0.14
ACTN1-220ENST00000556433 F5H768 121 aa15.92■□□□□ 0.14
ACTN1-220ENST00000556433 BCAP31P51572 246 aa15.92■□□□□ 0.14
ACTN1-220ENST00000556433 BPIFA4PQ86YQ2 179 aa15.92■□□□□ 0.14
ACTN1-220ENST00000556433 TMEM37Q8WXS4 190 aa15.92■□□□□ 0.14
ACTN1-220ENST00000556433 SLC50A1Q9BRV3 221 aa15.92■□□□□ 0.14
ACTN1-220ENST00000556433 LSM5Q9Y4Y9 91 aaKnown RBP15.92■□□□□ 0.14
ACTN1-220ENST00000556433 LYRM1O43325 122 aa15.91■□□□□ 0.14
ACTN1-220ENST00000556433 CDKN1BP46527 198 aa15.91■□□□□ 0.14
ACTN1-220ENST00000556433 C10orf113Q5VZT2 155 aa15.91■□□□□ 0.14
ACTN1-220ENST00000556433 TRAV6A0A075B6T7 132 aa15.9■□□□□ 0.14
ACTN1-220ENST00000556433 H3BTX0 84 aa15.9■□□□□ 0.14
ACTN1-220ENST00000556433 TCRBP04435 133 aa15.9■□□□□ 0.14
ACTN1-220ENST00000556433 RAB31Q13636 194 aa15.9■□□□□ 0.14
ACTN1-220ENST00000556433 SOHLH1Q5JUK2 328 aa15.9■□□□□ 0.14
ACTN1-220ENST00000556433 ATG101Q9BSB4 218 aa15.9■□□□□ 0.14
ACTN1-220ENST00000556433 DNAJC4Q9NNZ3 241 aa15.9■□□□□ 0.14
ACTN1-220ENST00000556433 C5orf51A6NDU8 294 aa15.89■□□□□ 0.13
ACTN1-220ENST00000556433 CBY3A6NI87 242 aa15.89■□□□□ 0.13
ACTN1-220ENST00000556433 ATP5G1P05496 136 aa15.89■□□□□ 0.13
ACTN1-220ENST00000556433 ATP5G3P48201 142 aa15.89■□□□□ 0.13
ACTN1-220ENST00000556433 CAMLGP49069 296 aa15.89■□□□□ 0.13
ACTN1-220ENST00000556433 CAV2P51636 162 aa15.89■□□□□ 0.13
ACTN1-220ENST00000556433 OPCMLQ14982 345 aa15.89■□□□□ 0.13
ACTN1-220ENST00000556433 MORN5Q5VZ52 161 aa15.89■□□□□ 0.13
ACTN1-220ENST00000556433 ZNF431Q8TF32 576 aaPredicted RBP15.89■□□□□ 0.13
ACTN1-220ENST00000556433 C16orf74Q96GX8 76 aa15.89■□□□□ 0.13
ACTN1-220ENST00000556433 SEC22CQ9BRL7 303 aa15.89■□□□□ 0.13
ACTN1-220ENST00000556433 TIMM8BQ9Y5J9 83 aaPredicted RBP15.89■□□□□ 0.13
ACTN1-220ENST00000556433 FAM24AA6NFZ4 105 aa15.88■□□□□ 0.13
ACTN1-220ENST00000556433 PRAC2D3DTV9 90 aa15.88■□□□□ 0.13
ACTN1-220ENST00000556433 CST7O76096 145 aa15.88■□□□□ 0.13
ACTN1-220ENST00000556433 NUDT3O95989 172 aa15.88■□□□□ 0.13
ACTN1-220ENST00000556433 FAM3BP58499 235 aaPredicted RBP15.88■□□□□ 0.13
ACTN1-220ENST00000556433 C1orf134Q5TEV5 83 aa15.88■□□□□ 0.13
ACTN1-220ENST00000556433 Q6ZRG5 221 aa15.88■□□□□ 0.13
ACTN1-220ENST00000556433 NRARPQ7Z6K4 114 aa15.88■□□□□ 0.13
ACTN1-220ENST00000556433 OR10J6PQ8NGY7 276 aa15.88■□□□□ 0.13
ACTN1-220ENST00000556433 H7BYZ3 331 aa15.87■□□□□ 0.13
ACTN1-220ENST00000556433 SLC17A3O00476 420 aa15.87■□□□□ 0.13
ACTN1-220ENST00000556433 KIR3DS1Q14943 382 aa15.87■□□□□ 0.13
ACTN1-220ENST00000556433 MIC13Q5XKP0 118 aa15.87■□□□□ 0.13
ACTN1-220ENST00000556433 ZNF493Q6ZR52 646 aa15.87■□□□□ 0.13
ACTN1-220ENST00000556433 C2orf50Q96LR7 162 aa15.87■□□□□ 0.13
ACTN1-220ENST00000556433 PARD6GQ9BYG4 376 aaPredicted RBP15.87■□□□□ 0.13
ACTN1-220ENST00000556433 NOP10Q9NPE3 64 aaKnown RBP15.87■□□□□ 0.13
ACTN1-220ENST00000556433 PXMP4Q9Y6I8 212 aa15.87■□□□□ 0.13
ACTN1-220ENST00000556433 NACAE9PAV3 2078 aa15.87■□□□□ 0.13
ACTN1-220ENST00000556433 TRAV5A0A0B4J249 113 aa15.86■□□□□ 0.13
ACTN1-220ENST00000556433 H3BQ15 152 aa15.86■□□□□ 0.13
ACTN1-220ENST00000556433 IGLC2P0DOY2 106 aa15.86■□□□□ 0.13
ACTN1-220ENST00000556433 MED14OSP0DP75 135 aa15.86■□□□□ 0.13
ACTN1-220ENST00000556433 C12orf45Q8N5I9 185 aaPredicted RBP15.86■□□□□ 0.13
ACTN1-220ENST00000556433 NUDT15Q9NV35 164 aa15.86■□□□□ 0.13
ACTN1-220ENST00000556433 UQCC1Q9NVA1 299 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 99.6 ms