RNA–Protein interactions for RNA: ENST00000556162.5

SNX6-206, Transcript of sorting nexin 6, humanhuman

TSL 2

Gene SNX6, Length 1,855 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-206ENST00000556162 BAP18Q8IXM2 172 aa10.51□□□□□ -0.73
SNX6-206ENST00000556162 OR51M1Q9H341 326 aa10.51□□□□□ -0.73
SNX6-206ENST00000556162 H3BQ15 152 aa10.5□□□□□ -0.73
SNX6-206ENST00000556162 OR7C2O60412 319 aa10.5□□□□□ -0.73
SNX6-206ENST00000556162 FRMD6-AS1P0C7T7 363 aa10.5□□□□□ -0.73
SNX6-206ENST00000556162 PYYP10082 97 aa10.5□□□□□ -0.73
SNX6-206ENST00000556162 TPT1P13693 172 aaKnown RBP10.5□□□□□ -0.73
SNX6-206ENST00000556162 ZNF124Q15973 351 aa10.5□□□□□ -0.73
SNX6-206ENST00000556162 KHDC3LQ587J8 217 aa10.5□□□□□ -0.73
SNX6-206ENST00000556162 AKR1C8PQ5T2L2 129 aa10.5□□□□□ -0.73
SNX6-206ENST00000556162 C9orf62Q8N4C0 152 aa10.5□□□□□ -0.73
SNX6-206ENST00000556162 RPP25LQ8N5L8 163 aaKnown RBP10.5□□□□□ -0.73
SNX6-206ENST00000556162 CITED4Q96RK1 184 aa10.5□□□□□ -0.73
SNX6-206ENST00000556162 PAXXQ9BUH6 204 aa10.5□□□□□ -0.73
SNX6-206ENST00000556162 RPRMQ9NS64 109 aa10.5□□□□□ -0.73
SNX6-206ENST00000556162 H3BTX0 84 aa10.49□□□□□ -0.73
SNX6-206ENST00000556162 SEC11BP0C7V7 166 aa10.49□□□□□ -0.73
SNX6-206ENST00000556162 CDC34P49427 236 aaPredicted RBP10.49□□□□□ -0.73
SNX6-206ENST00000556162 ACTR3CQ9C0K3 210 aaPredicted RBP10.49□□□□□ -0.73
SNX6-206ENST00000556162 ZNF586Q9NXT0 402 aa10.49□□□□□ -0.73
SNX6-206ENST00000556162 IGFL4Q6B9Z1 124 aa10.49□□□□□ -0.73
SNX6-206ENST00000556162 STOML3Q8TAV4 291 aa10.49□□□□□ -0.73
SNX6-206ENST00000556162 RNF141Q8WVD5 230 aa10.49□□□□□ -0.73
SNX6-206ENST00000556162 SLC50A1Q9BRV3 221 aa10.49□□□□□ -0.73
SNX6-206ENST00000556162 TRAV8-2A0A0B4J237 113 aa10.48□□□□□ -0.73
SNX6-206ENST00000556162 EIF3GO75821 320 aaKnown RBP eCLIP10.48□□□□□ -0.73
SNX6-206ENST00000556162 NBEAP1P0C6P0 100 aa10.48□□□□□ -0.73
SNX6-206ENST00000556162 PQLC2Q6ZP29 291 aa10.48□□□□□ -0.73
SNX6-206ENST00000556162 SLC51BQ86UW2 128 aa10.48□□□□□ -0.73
SNX6-206ENST00000556162 BLNKQ8WV28 456 aa10.48□□□□□ -0.73
SNX6-206ENST00000556162 RAB24Q969Q5 203 aa10.48□□□□□ -0.73
SNX6-206ENST00000556162 SAT2Q96F10 170 aaPredicted RBP10.48□□□□□ -0.73
SNX6-206ENST00000556162 ZNF331Q9NQX6 463 aaPredicted RBP10.48□□□□□ -0.73
SNX6-206ENST00000556162 TRBV19A0A075B6N1 114 aa10.47□□□□□ -0.73
SNX6-206ENST00000556162 LOC102724200A0A096LPH7 203 aaPredicted RBP10.47□□□□□ -0.73
SNX6-206ENST00000556162 RBMY1BA6NDE4 496 aaKnown RBP10.47□□□□□ -0.73
SNX6-206ENST00000556162 RBMY1EA6NEQ0 496 aaKnown RBP10.47□□□□□ -0.73
SNX6-206ENST00000556162 HMGB3O15347 200 aaKnown RBP10.47□□□□□ -0.73
SNX6-206ENST00000556162 OR10J4P0C629 311 aa10.47□□□□□ -0.73
SNX6-206ENST00000556162 RBMY1DP0C7P1 496 aaKnown RBP10.47□□□□□ -0.73
SNX6-206ENST00000556162 NKX2-5P52952 324 aaPredicted RBP10.47□□□□□ -0.73
SNX6-206ENST00000556162 PDE6HQ13956 83 aa10.47□□□□□ -0.73
SNX6-206ENST00000556162 ACTL10Q5JWF8 245 aa10.47□□□□□ -0.73
SNX6-206ENST00000556162 STHQ8IWL8 128 aa10.47□□□□□ -0.73
SNX6-206ENST00000556162 RNF182Q8N6D2 247 aa10.47□□□□□ -0.73
SNX6-206ENST00000556162 FXYD5Q96DB9 178 aa10.47□□□□□ -0.73
SNX6-206ENST00000556162 CLEC5AQ9NY25 188 aa10.47□□□□□ -0.73
SNX6-206ENST00000556162 DNAH9Q9NYC9 4486 aa10.47□□□□□ -0.73
SNX6-206ENST00000556162 KNCNA6PVL3 124 aa10.47□□□□□ -0.73
SNX6-206ENST00000556162 UMAD1C9J7I0 102 aa10.47□□□□□ -0.73
SNX6-206ENST00000556162 SLC17A3O00476 420 aa10.47□□□□□ -0.73
SNX6-206ENST00000556162 ZNF253O75346 499 aa10.47□□□□□ -0.73
SNX6-206ENST00000556162 UBE2L3P68036 154 aaKnown RBP10.47□□□□□ -0.73
SNX6-206ENST00000556162 EIF5AL1Q6IS14 154 aaKnown RBP10.47□□□□□ -0.73
SNX6-206ENST00000556162 LINC00322Q6ZN03 302 aaPredicted RBP10.47□□□□□ -0.73
SNX6-206ENST00000556162 ZNF503Q96F45 646 aa10.47□□□□□ -0.73
SNX6-206ENST00000556162 C20orf173Q96LM9 149 aa10.47□□□□□ -0.73
SNX6-206ENST00000556162 B9D2Q9BPU9 175 aa10.47□□□□□ -0.73
SNX6-206ENST00000556162 STAG3L2P0CL84 134 aa10.46□□□□□ -0.74
SNX6-206ENST00000556162 STAG3L3P0CL85 134 aa10.46□□□□□ -0.74
SNX6-206ENST00000556162 PSG9Q00887 426 aa10.46□□□□□ -0.74
SNX6-206ENST00000556162 PSG3Q16557 428 aa10.46□□□□□ -0.74
SNX6-206ENST00000556162 EBLN2Q6P2I7 272 aa10.46□□□□□ -0.74
SNX6-206ENST00000556162 TMED6Q8WW62 240 aa10.46□□□□□ -0.74
SNX6-206ENST00000556162 CTXND1A0A1B0GTU2 59 aa10.45□□□□□ -0.74
SNX6-206ENST00000556162 RPL35AP18077 110 aaKnown RBP10.45□□□□□ -0.74
SNX6-206ENST00000556162 HLA-DMBP28068 263 aa10.45□□□□□ -0.74
SNX6-206ENST00000556162 FOXI2Q6ZQN5 318 aa10.45□□□□□ -0.74
SNX6-206ENST00000556162 ZNF738Q8NE65 137 aa10.45□□□□□ -0.74
SNX6-206ENST00000556162 NDUFB4O95168 129 aa10.44□□□□□ -0.74
SNX6-206ENST00000556162 ARL14EPLP0DKL9 152 aa10.44□□□□□ -0.74
SNX6-206ENST00000556162 APOC4P55056 127 aa10.44□□□□□ -0.74
SNX6-206ENST00000556162 DEFB1P60022 68 aa10.44□□□□□ -0.74
SNX6-206ENST00000556162 HAGHQ16775 308 aa10.44□□□□□ -0.74
SNX6-206ENST00000556162 SBSPONQ8IVN8 264 aa10.44□□□□□ -0.74
SNX6-206ENST00000556162 ASCL2Q99929 193 aa10.44□□□□□ -0.74
SNX6-206ENST00000556162 SAV1Q9H4B6 383 aaPredicted RBP10.44□□□□□ -0.74
SNX6-206ENST00000556162 AAMDCQ9H7C9 122 aa10.44□□□□□ -0.74
SNX6-206ENST00000556162 BOLA2-SMG1P6H3BVE0 249 aa10.44□□□□□ -0.74
SNX6-206ENST00000556162 CXorf1O96002 111 aa10.44□□□□□ -0.74
SNX6-206ENST00000556162 HLA-DRB4P13762 266 aa10.44□□□□□ -0.74
SNX6-206ENST00000556162 ZNF726P1Q15940 193 aa10.44□□□□□ -0.74
SNX6-206ENST00000556162 PLA2G2EQ9NZK7 142 aa10.44□□□□□ -0.74
SNX6-206ENST00000556162 HLA-DRB4X5D2U9 266 aa10.44□□□□□ -0.74
SNX6-206ENST00000556162 KIR2DL5BA0A0G2JN68 375 aa10.43□□□□□ -0.74
SNX6-206ENST00000556162 KIR2DL5BA0A0G2JPC4 375 aa10.43□□□□□ -0.74
SNX6-206ENST00000556162 F6UB75 175 aa10.43□□□□□ -0.74
SNX6-206ENST00000556162 H3BMM0 161 aa10.43□□□□□ -0.74
SNX6-206ENST00000556162 RANP62826 216 aaKnown RBP10.43□□□□□ -0.74
SNX6-206ENST00000556162 GDF5OSQ5U4N7 250 aa10.43□□□□□ -0.74
SNX6-206ENST00000556162 SSX7Q7RTT5 188 aa10.43□□□□□ -0.74
SNX6-206ENST00000556162 TRPT1Q86TN4 253 aaKnown RBP10.43□□□□□ -0.74
SNX6-206ENST00000556162 KIR2DL5AQ8N109 375 aa10.43□□□□□ -0.74
SNX6-206ENST00000556162 KIR2DL5BQ8NHK3 375 aa10.43□□□□□ -0.74
SNX6-206ENST00000556162 RPUSD4Q96CM3 377 aaKnown RBP10.43□□□□□ -0.74
SNX6-206ENST00000556162 A0A0J9YX75 114 aa10.42□□□□□ -0.74
SNX6-206ENST00000556162 GCHFRP30047 84 aa10.42□□□□□ -0.74
SNX6-206ENST00000556162 FHITP49789 147 aa10.42□□□□□ -0.74
SNX6-206ENST00000556162 DPPA3Q6W0C5 159 aa10.42□□□□□ -0.74
SNX6-206ENST00000556162 LYPD1Q8N2G4 141 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 100.6 ms