RNA–Protein interactions for RNA: ENST00000554819.5

SCFD1-214, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 608 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-214ENST00000554819 PIEZO2Q9H5I5 2752 aa0.12□□□□□ -2.39
SCFD1-214ENST00000554819 IGF2RP11717 2491 aa0.12□□□□□ -2.39
SCFD1-214ENST00000554819 LAMA3Q16787 3333 aa0.12□□□□□ -2.39
SCFD1-214ENST00000554819 FAT3Q8TDW7 4589 aa0.12□□□□□ -2.39
SCFD1-214ENST00000554819 MTORP42345 2549 aa0.12□□□□□ -2.39
SCFD1-214ENST00000554819 RFX7Q2KHR2 1363 aa0.12□□□□□ -2.39
SCFD1-214ENST00000554819 A0A087WSZ3 146 aa0.12□□□□□ -2.39
SCFD1-214ENST00000554819 TRAV10A0A0B4J240 114 aa0.12□□□□□ -2.39
SCFD1-214ENST00000554819 FAM159BA6NKW6 160 aa0.12□□□□□ -2.39
SCFD1-214ENST00000554819 TMEM114B3SHH9 223 aa0.12□□□□□ -2.39
SCFD1-214ENST00000554819 B4DSR2 109 aa0.12□□□□□ -2.39
SCFD1-214ENST00000554819 K7EIL1 84 aa0.12□□□□□ -2.39
SCFD1-214ENST00000554819 NDUFB3O43676 98 aa0.12□□□□□ -2.39
SCFD1-214ENST00000554819 ERP29P30040 261 aaKnown RBP0.12□□□□□ -2.39
SCFD1-214ENST00000554819 ATP5G3P48201 142 aa0.12□□□□□ -2.39
SCFD1-214ENST00000554819 SPINK7P58062 85 aa0.12□□□□□ -2.39
SCFD1-214ENST00000554819 DEFA3P59666 94 aa0.12□□□□□ -2.39
SCFD1-214ENST00000554819 MYL6P60660 151 aa0.12□□□□□ -2.39
SCFD1-214ENST00000554819 ERVS71-1P61550 626 aa0.12□□□□□ -2.39
SCFD1-214ENST00000554819 TEN1Q86WV5 123 aa0.12□□□□□ -2.39
SCFD1-214ENST00000554819 TET1Q8NFU7 2136 aa0.12□□□□□ -2.39
SCFD1-214ENST00000554819 OR5D14Q8NGL3 314 aa0.12□□□□□ -2.39
SCFD1-214ENST00000554819 OR10AC1Q8NH08 325 aa0.12□□□□□ -2.39
SCFD1-214ENST00000554819 GNPDA2Q8TDQ7 276 aa0.12□□□□□ -2.39
SCFD1-214ENST00000554819 PPP1R14BQ96C90 147 aa0.12□□□□□ -2.39
SCFD1-214ENST00000554819 SIGMAR1Q99720 223 aa0.12□□□□□ -2.39
SCFD1-214ENST00000554819 SLC25A21Q9BQT8 299 aaPredicted RBP0.12□□□□□ -2.39
SCFD1-214ENST00000554819 IMUPQ9GZP8 106 aa0.12□□□□□ -2.39
SCFD1-214ENST00000554819 NMNAT1Q9HAN9 279 aaPredicted RBP0.12□□□□□ -2.39
SCFD1-214ENST00000554819 MED29Q9NX70 200 aa0.12□□□□□ -2.39
SCFD1-214ENST00000554819 PCTPQ9UKL6 214 aa0.12□□□□□ -2.39
SCFD1-214ENST00000554819 LY96Q9Y6Y9 160 aa0.12□□□□□ -2.39
SCFD1-214ENST00000554819 PRRC2CQ9Y520 2896 aaKnown RBP0.12□□□□□ -2.39
SCFD1-214ENST00000554819 ZFHX4Q86UP3 3567 aa0.12□□□□□ -2.39
SCFD1-214ENST00000554819 NBEAQ8NFP9 2946 aa0.12□□□□□ -2.39
SCFD1-214ENST00000554819 SCN8AQ9UQD0 1980 aa0.12□□□□□ -2.39
SCFD1-214ENST00000554819 BOD1L1Q8NFC6 3051 aa0.12□□□□□ -2.39
SCFD1-214ENST00000554819 CHD9Q3L8U1 2897 aa0.12□□□□□ -2.39
SCFD1-214ENST00000554819 CELSR1Q9NYQ6 3014 aa0.11□□□□□ -2.39
SCFD1-214ENST00000554819 H3BRM9 83 aa0.11□□□□□ -2.39
SCFD1-214ENST00000554819 TAX1BP3O14907 124 aa0.11□□□□□ -2.39
SCFD1-214ENST00000554819 CTXN2P0C2S0 81 aa0.11□□□□□ -2.39
SCFD1-214ENST00000554819 COX7CP15954 63 aa0.11□□□□□ -2.39
SCFD1-214ENST00000554819 SERPINB9P50453 376 aa0.11□□□□□ -2.39
SCFD1-214ENST00000554819 UBE2BP63146 152 aa0.11□□□□□ -2.39
SCFD1-214ENST00000554819 LIN52Q52LA3 116 aa0.11□□□□□ -2.39
SCFD1-214ENST00000554819 BCL2L15Q5TBC7 163 aa0.11□□□□□ -2.39
SCFD1-214ENST00000554819 ZNF431Q8TF32 576 aaPredicted RBP0.11□□□□□ -2.39
SCFD1-214ENST00000554819 TSKUQ8WUA8 353 aa0.11□□□□□ -2.39
SCFD1-214ENST00000554819 BTF3L4Q96K17 158 aa0.11□□□□□ -2.39
SCFD1-214ENST00000554819 TEX37Q96LM6 180 aa0.11□□□□□ -2.39
SCFD1-214ENST00000554819 KIFC1Q9BW19 673 aa0.11□□□□□ -2.39
SCFD1-214ENST00000554819 CCDC94Q9BW85 323 aaPredicted RBP0.11□□□□□ -2.39
SCFD1-214ENST00000554819 CSMD1Q96PZ7 3565 aa0.11□□□□□ -2.39
SCFD1-214ENST00000554819 MUC4Q99102 2169 aa0.11□□□□□ -2.39
SCFD1-214ENST00000554819 CELSR2Q9HCU4 2923 aa0.1□□□□□ -2.39
SCFD1-214ENST00000554819 MYH10P35580 1976 aa0.1□□□□□ -2.39
SCFD1-214ENST00000554819 LAMA2P24043 3122 aaKnown RBP0.1□□□□□ -2.39
SCFD1-214ENST00000554819 DCHS1Q96JQ0 3298 aa0.1□□□□□ -2.39
SCFD1-214ENST00000554819 C17orf112F2Z3M2 114 aa0.1□□□□□ -2.39
SCFD1-214ENST00000554819 F8W1H4 67 aa0.1□□□□□ -2.39
SCFD1-214ENST00000554819 GGCTO75223 188 aaKnown RBP0.1□□□□□ -2.39
SCFD1-214ENST00000554819 ERC2-IT1O76042 136 aa0.1□□□□□ -2.39
SCFD1-214ENST00000554819 IFNA7P01567 189 aa0.1□□□□□ -2.39
SCFD1-214ENST00000554819 IGLV1-51P01701 117 aa0.1□□□□□ -2.39
SCFD1-214ENST00000554819 CD2P06729 351 aa0.1□□□□□ -2.39
SCFD1-214ENST00000554819 CST2P09228 141 aa0.1□□□□□ -2.39
SCFD1-214ENST00000554819 CXCL8P10145 99 aa0.1□□□□□ -2.39
SCFD1-214ENST00000554819 FOXA3P55318 350 aaPredicted RBP0.1□□□□□ -2.39
SCFD1-214ENST00000554819 MYL5Q02045 173 aa0.1□□□□□ -2.39
SCFD1-214ENST00000554819 AKIRIN2Q53H80 203 aa0.1□□□□□ -2.39
SCFD1-214ENST00000554819 C1orf134Q5TEV5 83 aa0.1□□□□□ -2.39
SCFD1-214ENST00000554819 PATE2Q6UY27 113 aa0.1□□□□□ -2.39
SCFD1-214ENST00000554819 Q6ZS92 163 aa0.1□□□□□ -2.39
SCFD1-214ENST00000554819 GOLT1AQ6ZVE7 132 aa0.1□□□□□ -2.39
SCFD1-214ENST00000554819 OR5AS1Q8N127 324 aa0.1□□□□□ -2.39
SCFD1-214ENST00000554819 OR10X1Q8NGY0 326 aa0.1□□□□□ -2.39
SCFD1-214ENST00000554819 Q8TAT8 98 aa0.1□□□□□ -2.39
SCFD1-214ENST00000554819 MUCL1Q96DR8 90 aa0.1□□□□□ -2.39
SCFD1-214ENST00000554819 ZC2HC1AQ96GY0 325 aa0.1□□□□□ -2.39
SCFD1-214ENST00000554819 PBOV1Q9GZY1 135 aa0.1□□□□□ -2.39
SCFD1-214ENST00000554819 TMEM138Q9NPI0 162 aa0.1□□□□□ -2.39
SCFD1-214ENST00000554819 SPTAN1Q13813 2472 aaKnown RBP0.1□□□□□ -2.39
SCFD1-214ENST00000554819 SIP14410 1827 aa0.1□□□□□ -2.39
SCFD1-214ENST00000554819 PCF11O94913 1555 aaKnown RBP0.1□□□□□ -2.39
SCFD1-214ENST00000554819 EP400Q96L91 3159 aa0.1□□□□□ -2.39
SCFD1-214ENST00000554819 PLXNA4Q9HCM2 1894 aa0.1□□□□□ -2.39
SCFD1-214ENST00000554819 VCANP13611 3396 aa0.09□□□□□ -2.39
SCFD1-214ENST00000554819 MAP1AP78559 2803 aaPredicted RBP0.09□□□□□ -2.39
SCFD1-214ENST00000554819 TMEM256-PLSCR3K7ERE1 68 aa0.09□□□□□ -2.4
SCFD1-214ENST00000554819 C1QBP02746 253 aa0.09□□□□□ -2.4
SCFD1-214ENST00000554819 HLA-EP13747 358 aa0.09□□□□□ -2.4
SCFD1-214ENST00000554819 DYNLT3P51808 116 aa0.09□□□□□ -2.4
SCFD1-214ENST00000554819 HSPE1P61604 102 aaKnown RBP0.09□□□□□ -2.4
SCFD1-214ENST00000554819 SPA17Q15506 151 aa0.09□□□□□ -2.4
SCFD1-214ENST00000554819 GLIPR1L1Q6UWM5 242 aa0.09□□□□□ -2.4
SCFD1-214ENST00000554819 ATOH7Q8N100 152 aa0.09□□□□□ -2.4
SCFD1-214ENST00000554819 OR10AG1Q8NH19 301 aa0.09□□□□□ -2.4
SCFD1-214ENST00000554819 POP5Q969H6 163 aaKnown RBP0.09□□□□□ -2.4
SCFD1-214ENST00000554819 SPEGQ15772 3267 aa0.09□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms