RNA–Protein interactions for RNA: ENST00000554607.1

FOXA1-204, Transcript of forkhead box A1, humanhuman

TSL 3

Gene FOXA1, Length 789 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-204ENST00000554607 CCDC59Q9P031 241 aaKnown RBP16.82■□□□□ 0.28
FOXA1-204ENST00000554607 TRAV26-1A0A087WT03 109 aa16.81■□□□□ 0.28
FOXA1-204ENST00000554607 OR5G3P0C626 314 aa16.81■□□□□ 0.28
FOXA1-204ENST00000554607 SELENOTP62341 195 aa16.81■□□□□ 0.28
FOXA1-204ENST00000554607 SMCO3A2RU48 225 aa16.8■□□□□ 0.28
FOXA1-204ENST00000554607 FABP12A6NFH5 140 aa16.8■□□□□ 0.28
FOXA1-204ENST00000554607 LINC00869P0C866 280 aa16.8■□□□□ 0.28
FOXA1-204ENST00000554607 CCDC28AQ8IWP9 274 aa16.8■□□□□ 0.28
FOXA1-204ENST00000554607 RPUSD4Q96CM3 377 aaKnown RBP16.8■□□□□ 0.28
FOXA1-204ENST00000554607 H3BP45 60 aa16.79■□□□□ 0.28
FOXA1-204ENST00000554607 SFT2D2O95562 160 aa16.79■□□□□ 0.28
FOXA1-204ENST00000554607 AP3S2P59780 193 aa16.79■□□□□ 0.28
FOXA1-204ENST00000554607 DYNC2LI1Q8TCX1 351 aa16.79■□□□□ 0.28
FOXA1-204ENST00000554607 UHRF2Q96PU4 802 aa16.79■□□□□ 0.28
FOXA1-204ENST00000554607 SOSTQ9BQB4 213 aa16.79■□□□□ 0.28
FOXA1-204ENST00000554607 KRTAP1-5Q9BYS1 174 aa16.79■□□□□ 0.28
FOXA1-204ENST00000554607 H3BNG1 76 aa16.78■□□□□ 0.28
FOXA1-204ENST00000554607 HOXB5P09067 269 aa16.78■□□□□ 0.28
FOXA1-204ENST00000554607 KRTAP10-2P60368 255 aa16.78■□□□□ 0.28
FOXA1-204ENST00000554607 LINC00612Q8N6U2 182 aa16.78■□□□□ 0.28
FOXA1-204ENST00000554607 SLC25A21Q9BQT8 299 aaPredicted RBP16.78■□□□□ 0.28
FOXA1-204ENST00000554607 ZNF701M0R085 212 aaPredicted RBP16.77■□□□□ 0.28
FOXA1-204ENST00000554607 CXCL2P19875 107 aa16.77■□□□□ 0.28
FOXA1-204ENST00000554607 ANXA7P20073 488 aaKnown RBP16.77■□□□□ 0.28
FOXA1-204ENST00000554607 ESRGQ1W209 222 aa16.77■□□□□ 0.28
FOXA1-204ENST00000554607 RAB2BQ8WUD1 216 aa16.77■□□□□ 0.28
FOXA1-204ENST00000554607 MRPS26Q9BYN8 205 aaKnown RBP16.77■□□□□ 0.28
FOXA1-204ENST00000554607 MRPS16Q9Y3D3 137 aaKnown RBP16.77■□□□□ 0.28
FOXA1-204ENST00000554607 A0A0J9YY99 117 aa16.76■□□□□ 0.27
FOXA1-204ENST00000554607 RLN2P04090 185 aa16.76■□□□□ 0.27
FOXA1-204ENST00000554607 TNFSF8P32971 234 aa16.76■□□□□ 0.27
FOXA1-204ENST00000554607 TOMM5Q8N4H5 51 aa16.76■□□□□ 0.27
FOXA1-204ENST00000554607 ID3Q02535 119 aa16.75■□□□□ 0.27
FOXA1-204ENST00000554607 PPP1R1AQ13522 171 aa16.75■□□□□ 0.27
FOXA1-204ENST00000554607 LCN15Q6UWW0 184 aa16.75■□□□□ 0.27
FOXA1-204ENST00000554607 SLC50A1Q9BRV3 221 aa16.75■□□□□ 0.27
FOXA1-204ENST00000554607 ARL6Q9H0F7 186 aa16.75■□□□□ 0.27
FOXA1-204ENST00000554607 PSENENQ9NZ42 101 aa16.75■□□□□ 0.27
FOXA1-204ENST00000554607 HERC1Q15751 4861 aa16.75■□□□□ 0.27
FOXA1-204ENST00000554607 GAGE12BA1L429 117 aa16.74■□□□□ 0.27
FOXA1-204ENST00000554607 PMS2P5A8MQ11 134 aa16.74■□□□□ 0.27
FOXA1-204ENST00000554607 SNURFLB1AK76 121 aa16.74■□□□□ 0.27
FOXA1-204ENST00000554607 GAGE7O76087 117 aa16.74■□□□□ 0.27
FOXA1-204ENST00000554607 GAGE12FP0CL80 117 aa16.74■□□□□ 0.27
FOXA1-204ENST00000554607 GAGE12GP0CL81 117 aa16.74■□□□□ 0.27
FOXA1-204ENST00000554607 GAGE12IP0CL82 117 aa16.74■□□□□ 0.27
FOXA1-204ENST00000554607 BCL7BQ9BQE9 202 aa16.74■□□□□ 0.27
FOXA1-204ENST00000554607 NPVFQ9HCQ7 196 aa16.74■□□□□ 0.27
FOXA1-204ENST00000554607 HOXA5P20719 270 aa16.73■□□□□ 0.27
FOXA1-204ENST00000554607 PXDC1Q5TGL8 231 aa16.73■□□□□ 0.27
FOXA1-204ENST00000554607 DEDD2Q8WXF8 326 aa16.73■□□□□ 0.27
FOXA1-204ENST00000554607 ARV1Q9H2C2 271 aa16.73■□□□□ 0.27
FOXA1-204ENST00000554607 ZNF331Q9NQX6 463 aaPredicted RBP16.73■□□□□ 0.27
FOXA1-204ENST00000554607 ZNF586Q9NXT0 402 aa16.73■□□□□ 0.27
FOXA1-204ENST00000554607 FNDC10F2Z333 226 aa16.72■□□□□ 0.27
FOXA1-204ENST00000554607 K7EPK0 472 aa16.72■□□□□ 0.27
FOXA1-204ENST00000554607 MRPS12O15235 138 aaKnown RBP16.72■□□□□ 0.27
FOXA1-204ENST00000554607 TMBIM6P55061 237 aa16.72■□□□□ 0.27
FOXA1-204ENST00000554607 POLR2GP62487 172 aaKnown RBP eCLIP16.72■□□□□ 0.27
FOXA1-204ENST00000554607 DLK1P80370 383 aa16.72■□□□□ 0.27
FOXA1-204ENST00000554607 PATE2Q6UY27 113 aa16.72■□□□□ 0.27
FOXA1-204ENST00000554607 MCFD2Q8NI22 146 aa16.72■□□□□ 0.27
FOXA1-204ENST00000554607 EPM2AB3EWF7 344 aa16.71■□□□□ 0.27
FOXA1-204ENST00000554607 PRB4P10163 310 aaPredicted RBP16.71■□□□□ 0.27
FOXA1-204ENST00000554607 GFI1BQ5VTD9 330 aa16.71■□□□□ 0.27
FOXA1-204ENST00000554607 TEPPQ6URK8 271 aa16.71■□□□□ 0.27
FOXA1-204ENST00000554607 CCDC190Q86UF4 302 aa16.71■□□□□ 0.27
FOXA1-204ENST00000554607 TRIM63Q969Q1 353 aa16.71■□□□□ 0.27
FOXA1-204ENST00000554607 SMIM8Q96KF7 97 aa16.71■□□□□ 0.27
FOXA1-204ENST00000554607 SLIRPQ9GZT3 109 aaKnown RBP16.71■□□□□ 0.27
FOXA1-204ENST00000554607 UBE2MP61081 183 aaKnown RBP16.7■□□□□ 0.26
FOXA1-204ENST00000554607 RRAS2P62070 204 aaPredicted RBP16.7■□□□□ 0.26
FOXA1-204ENST00000554607 KIR3DS1Q14943 382 aa16.7■□□□□ 0.26
FOXA1-204ENST00000554607 PYDC2Q56P42 97 aa16.7■□□□□ 0.26
FOXA1-204ENST00000554607 PGPEP1Q9NXJ5 209 aa16.7■□□□□ 0.26
FOXA1-204ENST00000554607 MGAT4CQ9UBM8 478 aa16.7■□□□□ 0.26
FOXA1-204ENST00000554607 C4orf46Q504U0 113 aa16.69■□□□□ 0.26
FOXA1-204ENST00000554607 LINC00305Q7Z4B0 112 aa16.69■□□□□ 0.26
FOXA1-204ENST00000554607 BPIFA4PQ86YQ2 179 aa16.69■□□□□ 0.26
FOXA1-204ENST00000554607 OR10P1Q8NGE3 313 aa16.69■□□□□ 0.26
FOXA1-204ENST00000554607 PTTG2Q9NZH5 202 aa16.69■□□□□ 0.26
FOXA1-204ENST00000554607 GOSR2O14653 212 aa16.68■□□□□ 0.26
FOXA1-204ENST00000554607 SSSCA1O60232 199 aa16.68■□□□□ 0.26
FOXA1-204ENST00000554607 DAZ2Q13117 558 aaKnown RBP16.68■□□□□ 0.26
FOXA1-204ENST00000554607 ZNF546Q86UE3 836 aa16.68■□□□□ 0.26
FOXA1-204ENST00000554607 PARD6GQ9BYG4 376 aaPredicted RBP16.68■□□□□ 0.26
FOXA1-204ENST00000554607 EREGO14944 169 aa16.67■□□□□ 0.26
FOXA1-204ENST00000554607 LINC00315P59091 139 aa16.67■□□□□ 0.26
FOXA1-204ENST00000554607 SLC38A11Q08AI6 406 aa16.67■□□□□ 0.26
FOXA1-204ENST00000554607 TMEM14EPQ6UXP3 125 aa16.67■□□□□ 0.26
FOXA1-204ENST00000554607 PYGO2Q9BRQ0 406 aa16.67■□□□□ 0.26
FOXA1-204ENST00000554607 TMPRSS5Q9H3S3 457 aa16.67■□□□□ 0.26
FOXA1-204ENST00000554607 PXMP4Q9Y6I8 212 aa16.67■□□□□ 0.26
FOXA1-204ENST00000554607 NOL3O60936 208 aaKnown RBP16.66■□□□□ 0.26
FOXA1-204ENST00000554607 CCNKO75909 580 aa16.66■□□□□ 0.26
FOXA1-204ENST00000554607 METTL15P1P0C7V9 234 aa16.66■□□□□ 0.26
FOXA1-204ENST00000554607 LEPP41159 167 aa16.66■□□□□ 0.26
FOXA1-204ENST00000554607 ODF3Q96PU9 254 aa16.66■□□□□ 0.26
FOXA1-204ENST00000554607 PRAC2D3DTV9 90 aa16.65■□□□□ 0.26
FOXA1-204ENST00000554607 SNRPCP09234 159 aaKnown RBP16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 135.8 ms