RNA–Protein interactions for RNA: ENST00000553612.5

GTF2A1-203, Transcript of general transcription factor IIA subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2A1, Length 6,306 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-203ENST00000553612 MS4A18Q3C1V0 323 aa7.28□□□□□ -1.24
GTF2A1-203ENST00000553612 CFAP126Q5VTH2 177 aa7.28□□□□□ -1.24
GTF2A1-203ENST00000553612 SDIM1Q6ZPB5 146 aa7.27□□□□□ -1.25
GTF2A1-203ENST00000553612 ANKRD36A6QL64 1941 aa7.27□□□□□ -1.25
GTF2A1-203ENST00000553612 CASP8AP2Q9UKL3 1982 aa7.27□□□□□ -1.25
GTF2A1-203ENST00000553612 FOXE3Q13461 319 aa7.27□□□□□ -1.25
GTF2A1-203ENST00000553612 IGHV3-49A0A0A0MS15 119 aa7.27□□□□□ -1.25
GTF2A1-203ENST00000553612 SCRG1O75711 98 aa7.27□□□□□ -1.25
GTF2A1-203ENST00000553612 C4orf48Q5BLP8 95 aa7.27□□□□□ -1.25
GTF2A1-203ENST00000553612 LINC01465Q8N7H1 131 aa7.27□□□□□ -1.25
GTF2A1-203ENST00000553612 DEFB127Q9H1M4 99 aa7.27□□□□□ -1.25
GTF2A1-203ENST00000553612 PCDH15Q96QU1 1955 aa7.27□□□□□ -1.25
GTF2A1-203ENST00000553612 LIPT2A6NK58 231 aa7.27□□□□□ -1.25
GTF2A1-203ENST00000553612 PSMG4Q5JS54 123 aa7.27□□□□□ -1.25
GTF2A1-203ENST00000553612 FAM240AA0A1B0GVK7 77 aa7.26□□□□□ -1.25
GTF2A1-203ENST00000553612 RICTORQ6R327 1708 aa7.26□□□□□ -1.25
GTF2A1-203ENST00000553612 CEP250Q9BV73 2442 aa7.26□□□□□ -1.25
GTF2A1-203ENST00000553612 SOSTDC1Q6X4U4 206 aa7.26□□□□□ -1.25
GTF2A1-203ENST00000553612 STHQ8IWL8 128 aa7.26□□□□□ -1.25
GTF2A1-203ENST00000553612 RNF182Q8N6D2 247 aa7.26□□□□□ -1.25
GTF2A1-203ENST00000553612 C2orf48Q96LS8 159 aa7.26□□□□□ -1.25
GTF2A1-203ENST00000553612 DYNLRB1Q9NP97 96 aa7.26□□□□□ -1.25
GTF2A1-203ENST00000553612 ABCA3Q99758 1704 aa7.26□□□□□ -1.25
GTF2A1-203ENST00000553612 TRAV12-2A0A075B6T6 113 aa7.26□□□□□ -1.25
GTF2A1-203ENST00000553612 COX7CP15954 63 aa7.26□□□□□ -1.25
GTF2A1-203ENST00000553612 NYNRINQ9P2P1 1898 aaKnown RBP7.26□□□□□ -1.25
GTF2A1-203ENST00000553612 DOCK7Q96N67 2140 aa7.26□□□□□ -1.25
GTF2A1-203ENST00000553612 MLANAQ16655 118 aa7.26□□□□□ -1.25
GTF2A1-203ENST00000553612 PYGO1Q9Y3Y4 419 aa7.26□□□□□ -1.25
GTF2A1-203ENST00000553612 MED12LQ86YW9 2145 aa7.26□□□□□ -1.25
GTF2A1-203ENST00000553612 NHSQ6T4R5 1651 aa7.26□□□□□ -1.25
GTF2A1-203ENST00000553612 FAM90A26D6RGX4 464 aa7.26□□□□□ -1.25
GTF2A1-203ENST00000553612 DOCK4Q8N1I0 1966 aa7.26□□□□□ -1.25
GTF2A1-203ENST00000553612 INAFM2P0DMQ5 153 aa7.25□□□□□ -1.25
GTF2A1-203ENST00000553612 DUTP33316 252 aaKnown RBP7.25□□□□□ -1.25
GTF2A1-203ENST00000553612 MRPS12O15235 138 aaKnown RBP7.25□□□□□ -1.25
GTF2A1-203ENST00000553612 SNRPD3P62318 126 aaKnown RBP7.25□□□□□ -1.25
GTF2A1-203ENST00000553612 PRR30Q53SZ7 412 aaPredicted RBP7.25□□□□□ -1.25
GTF2A1-203ENST00000553612 FAM186AA6NE01 2351 aa7.25□□□□□ -1.25
GTF2A1-203ENST00000553612 TMEM213A2RRL7 107 aa7.25□□□□□ -1.25
GTF2A1-203ENST00000553612 FAM27E3Q08E93 113 aa7.25□□□□□ -1.25
GTF2A1-203ENST00000553612 LINC01620Q4KN68 170 aa7.25□□□□□ -1.25
GTF2A1-203ENST00000553612 TREML4Q6UXN2 200 aa7.25□□□□□ -1.25
GTF2A1-203ENST00000553612 COL11A1P12107 1806 aaPredicted RBP7.25□□□□□ -1.25
GTF2A1-203ENST00000553612 NDUFC2-KCTD14E9PQ53 114 aa7.25□□□□□ -1.25
GTF2A1-203ENST00000553612 COX7A1P24310 79 aa7.25□□□□□ -1.25
GTF2A1-203ENST00000553612 HCFC1P51610 2035 aa7.25□□□□□ -1.25
GTF2A1-203ENST00000553612 ADAMTSL1Q8N6G6 1762 aa7.25□□□□□ -1.25
GTF2A1-203ENST00000553612 Q6ZS52 159 aa7.24□□□□□ -1.25
GTF2A1-203ENST00000553612 WIPF2Q8TF74 440 aaPredicted RBP7.24□□□□□ -1.25
GTF2A1-203ENST00000553612 LYZL4Q96KX0 146 aa7.24□□□□□ -1.25
GTF2A1-203ENST00000553612 MYOFQ9NZM1 2061 aa7.24□□□□□ -1.25
GTF2A1-203ENST00000553612 PLCE1Q9P212 2302 aa7.24□□□□□ -1.25
GTF2A1-203ENST00000553612 HLA-DMBP28068 263 aa7.24□□□□□ -1.25
GTF2A1-203ENST00000553612 DEFB103AP81534 67 aa7.24□□□□□ -1.25
GTF2A1-203ENST00000553612 RHOHQ15669 191 aa7.24□□□□□ -1.25
GTF2A1-203ENST00000553612 DGAT2L7PQ6IED9 249 aa7.24□□□□□ -1.25
GTF2A1-203ENST00000553612 Q9H3A6 140 aa7.24□□□□□ -1.25
GTF2A1-203ENST00000553612 LOC285556D6RIA3 1793 aa7.24□□□□□ -1.25
GTF2A1-203ENST00000553612 PLNP26678 52 aa7.24□□□□□ -1.25
GTF2A1-203ENST00000553612 DTX1Q86Y01 620 aa7.24□□□□□ -1.25
GTF2A1-203ENST00000553612 MLST8Q9BVC4 326 aa7.24□□□□□ -1.25
GTF2A1-203ENST00000553612 LY96Q9Y6Y9 160 aa7.24□□□□□ -1.25
GTF2A1-203ENST00000553612 INTS1Q8N201 2190 aaKnown RBP7.24□□□□□ -1.25
GTF2A1-203ENST00000553612 J3QQQ9 107 aa7.24□□□□□ -1.25
GTF2A1-203ENST00000553612 NXPH1P58417 271 aa7.24□□□□□ -1.25
GTF2A1-203ENST00000553612 C15orf62A8K5M9 175 aa7.24□□□□□ -1.25
GTF2A1-203ENST00000553612 TMEM92Q6UXU6 159 aa7.24□□□□□ -1.25
GTF2A1-203ENST00000553612 ZNF837Q96EG3 531 aaPredicted RBP7.23□□□□□ -1.25
GTF2A1-203ENST00000553612 NHLRC4P0CG21 123 aaPredicted RBP7.23□□□□□ -1.25
GTF2A1-203ENST00000553612 IGFL4Q6B9Z1 124 aa7.23□□□□□ -1.25
GTF2A1-203ENST00000553612 LYZL1Q6UWQ5 148 aa7.23□□□□□ -1.25
GTF2A1-203ENST00000553612 WDR83OSQ9Y284 106 aa7.23□□□□□ -1.25
GTF2A1-203ENST00000553612 GREB1LQ9C091 1923 aaPredicted RBP7.23□□□□□ -1.25
GTF2A1-203ENST00000553612 FAM90A22PA8MWA6 464 aa7.23□□□□□ -1.25
GTF2A1-203ENST00000553612 FAM90A12PA8MX19 464 aa7.23□□□□□ -1.25
GTF2A1-203ENST00000553612 FAM90A23PA8MXZ1 464 aa7.23□□□□□ -1.25
GTF2A1-203ENST00000553612 INS-IGF2F8WCM5 200 aa7.23□□□□□ -1.25
GTF2A1-203ENST00000553612 IGKV1-5P01602 117 aa7.23□□□□□ -1.25
GTF2A1-203ENST00000553612 SRD5A1P18405 259 aa7.23□□□□□ -1.25
GTF2A1-203ENST00000553612 FGF12P61328 243 aa7.23□□□□□ -1.25
GTF2A1-203ENST00000553612 QRFPP83859 136 aa7.23□□□□□ -1.25
GTF2A1-203ENST00000553612 FAM53AQ6NSI3 398 aaPredicted RBP7.23□□□□□ -1.25
GTF2A1-203ENST00000553612 TRAV23DV6A0A075B6W5 121 aa7.23□□□□□ -1.25
GTF2A1-203ENST00000553612 M0R1B8 84 aa7.23□□□□□ -1.25
GTF2A1-203ENST00000553612 MYCNOSP40205 109 aa7.23□□□□□ -1.25
GTF2A1-203ENST00000553612 ICE1Q9Y2F5 2266 aa7.23□□□□□ -1.25
GTF2A1-203ENST00000553612 IGKV2D-26A0A0A0MRZ7 120 aa7.23□□□□□ -1.25
GTF2A1-203ENST00000553612 TRAV3A0A0B4J244 114 aa7.23□□□□□ -1.25
GTF2A1-203ENST00000553612 TRIP6Q15654 476 aaKnown RBP7.23□□□□□ -1.25
GTF2A1-203ENST00000553612 LINC00336Q6ZUF6 198 aa7.23□□□□□ -1.25
GTF2A1-203ENST00000553612 CLEC2BQ92478 149 aa7.23□□□□□ -1.25
GTF2A1-203ENST00000553612 ZNF503Q96F45 646 aa7.23□□□□□ -1.25
GTF2A1-203ENST00000553612 LINC00526Q96FQ7 95 aa7.23□□□□□ -1.25
GTF2A1-203ENST00000553612 IQCF6A8MYZ5 107 aa7.22□□□□□ -1.25
GTF2A1-203ENST00000553612 IGHMP01871 453 aa7.22□□□□□ -1.25
GTF2A1-203ENST00000553612 LINC01587Q99440 93 aa7.22□□□□□ -1.25
GTF2A1-203ENST00000553612 RPP25Q9BUL9 199 aaKnown RBP7.22□□□□□ -1.25
GTF2A1-203ENST00000553612 ZNF236Q9UL36 1845 aa7.22□□□□□ -1.25
GTF2A1-203ENST00000553612 CFC1BP0CG36 223 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 111.2 ms