RNA–Protein interactions for RNA: ENST00000543555.5

MSH2-206, Transcript of mutS homolog 2, humanhuman

TSL 2 BASIC

Gene MSH2, Length 3,024 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-206ENST00000543555 LPAR2Q9HBW0 351 aa10.9□□□□□ -0.67
MSH2-206ENST00000543555 ANKRD17O75179 2603 aaKnown RBP10.9□□□□□ -0.67
MSH2-206ENST00000543555 FLNBO75369 2602 aaKnown RBP10.89□□□□□ -0.67
MSH2-206ENST00000543555 WNK2Q9Y3S1 2297 aa10.89□□□□□ -0.67
MSH2-206ENST00000543555 A0A1B0GXF2 115 aa10.89□□□□□ -0.67
MSH2-206ENST00000543555 A8MWL6 223 aa10.89□□□□□ -0.67
MSH2-206ENST00000543555 CIARTQ8N365 385 aaPredicted RBP10.89□□□□□ -0.67
MSH2-206ENST00000543555 NOL4LQ96MY1 436 aaPredicted RBP10.89□□□□□ -0.67
MSH2-206ENST00000543555 IGHV3-23P01764 117 aa10.89□□□□□ -0.67
MSH2-206ENST00000543555 C14orf144Q96I85 54 aa10.89□□□□□ -0.67
MSH2-206ENST00000543555 RCHY1Q96PM5 261 aa10.89□□□□□ -0.67
MSH2-206ENST00000543555 J3QKU1 62 aa10.88□□□□□ -0.67
MSH2-206ENST00000543555 CD33P20138 364 aa10.88□□□□□ -0.67
MSH2-206ENST00000543555 TMEM75Q8N9X5 138 aa10.88□□□□□ -0.67
MSH2-206ENST00000543555 GTSF1Q8WW33 167 aa10.88□□□□□ -0.67
MSH2-206ENST00000543555 KCNS1Q96KK3 526 aa10.88□□□□□ -0.67
MSH2-206ENST00000543555 FBXL7Q9UJT9 491 aa10.88□□□□□ -0.67
MSH2-206ENST00000543555 A8MWP6 167 aa10.88□□□□□ -0.67
MSH2-206ENST00000543555 NPIPB6E9PJ23 425 aa10.88□□□□□ -0.67
MSH2-206ENST00000543555 IGHV4-39P01824 125 aa10.88□□□□□ -0.67
MSH2-206ENST00000543555 OR2T8A6NH00 312 aa10.87□□□□□ -0.67
MSH2-206ENST00000543555 GPX1P07203 203 aa10.87□□□□□ -0.67
MSH2-206ENST00000543555 CAMPP49913 170 aa10.87□□□□□ -0.67
MSH2-206ENST00000543555 Q71RC1 249 aaPredicted RBP10.87□□□□□ -0.67
MSH2-206ENST00000543555 REC114Q7Z4M0 266 aa10.87□□□□□ -0.67
MSH2-206ENST00000543555 SIGLECL1Q8N7X8 197 aa10.87□□□□□ -0.67
MSH2-206ENST00000543555 GFRA4Q9GZZ7 299 aa10.87□□□□□ -0.67
MSH2-206ENST00000543555 NPFFO15130 113 aa10.87□□□□□ -0.67
MSH2-206ENST00000543555 SCGB2A1O75556 95 aa10.87□□□□□ -0.67
MSH2-206ENST00000543555 CTSGP08311 255 aa10.87□□□□□ -0.67
MSH2-206ENST00000543555 PDE6HQ13956 83 aa10.87□□□□□ -0.67
MSH2-206ENST00000543555 FAM110DQ8TAY7 271 aaPredicted RBP10.87□□□□□ -0.67
MSH2-206ENST00000543555 C18orf32Q8TCD1 76 aa10.87□□□□□ -0.67
MSH2-206ENST00000543555 POLR3KQ9Y2Y1 108 aaPredicted RBP10.87□□□□□ -0.67
MSH2-206ENST00000543555 A0A1W2PS18 150 aa10.87□□□□□ -0.67
MSH2-206ENST00000543555 K7EQM0 130 aa10.87□□□□□ -0.67
MSH2-206ENST00000543555 KRTAP10-9P60411 292 aa10.87□□□□□ -0.67
MSH2-206ENST00000543555 PIP4P2Q8N4L2 257 aa10.87□□□□□ -0.67
MSH2-206ENST00000543555 TXN2Q99757 166 aa10.87□□□□□ -0.67
MSH2-206ENST00000543555 SOX21Q9Y651 276 aaPredicted RBP10.87□□□□□ -0.67
MSH2-206ENST00000543555 HBBP68871 147 aa10.86□□□□□ -0.67
MSH2-206ENST00000543555 OR4B1Q8NGF8 309 aa10.86□□□□□ -0.67
MSH2-206ENST00000543555 TMUB1Q9BVT8 246 aa10.86□□□□□ -0.67
MSH2-206ENST00000543555 SSBP4Q9BWG4 385 aaPredicted RBP10.86□□□□□ -0.67
MSH2-206ENST00000543555 ZFP30Q9Y2G7 519 aa10.86□□□□□ -0.67
MSH2-206ENST00000543555 ZNF469Q96JG9 3925 aaPredicted RBP10.86□□□□□ -0.67
MSH2-206ENST00000543555 FAM231BA6NCW3 169 aa10.86□□□□□ -0.67
MSH2-206ENST00000543555 ZNF705FA8MVS1 300 aaPredicted RBP10.86□□□□□ -0.67
MSH2-206ENST00000543555 DIRC3C9JPN6 131 aa10.86□□□□□ -0.67
MSH2-206ENST00000543555 M0R3E3 92 aa10.86□□□□□ -0.67
MSH2-206ENST00000543555 ZNF705DP0CH99 300 aaPredicted RBP10.86□□□□□ -0.67
MSH2-206ENST00000543555 ZNF705BP0CI00 300 aaPredicted RBP10.86□□□□□ -0.67
MSH2-206ENST00000543555 PSG3Q16557 428 aa10.86□□□□□ -0.67
MSH2-206ENST00000543555 ECSCRQ19T08 205 aa10.86□□□□□ -0.67
MSH2-206ENST00000543555 C16orf54Q6UWD8 224 aa10.86□□□□□ -0.67
MSH2-206ENST00000543555 UNQ5815/PRO19632Q6UWF5 114 aa10.86□□□□□ -0.67
MSH2-206ENST00000543555 RBPMS2Q6ZRY4 209 aaKnown RBP10.86□□□□□ -0.67
MSH2-206ENST00000543555 VN1R17PQ8TDU5 208 aa10.86□□□□□ -0.67
MSH2-206ENST00000543555 PGLYRP4Q96LB8 373 aa10.86□□□□□ -0.67
MSH2-206ENST00000543555 PSG8Q9UQ74 426 aa10.86□□□□□ -0.67
MSH2-206ENST00000543555 ZNF785A8K8V0 405 aa10.85□□□□□ -0.67
MSH2-206ENST00000543555 ATP6V0E1O15342 81 aa10.85□□□□□ -0.67
MSH2-206ENST00000543555 AMTP48728 403 aa10.85□□□□□ -0.67
MSH2-206ENST00000543555 AAMDCQ9H7C9 122 aa10.85□□□□□ -0.67
MSH2-206ENST00000543555 CENPVL3A0A0U1RRI6 287 aa10.85□□□□□ -0.67
MSH2-206ENST00000543555 OR2D3Q8NGH3 330 aa10.85□□□□□ -0.67
MSH2-206ENST00000543555 ZC2HC1AQ96GY0 325 aa10.85□□□□□ -0.67
MSH2-206ENST00000543555 ZNF324O75467 553 aaPredicted RBP10.84□□□□□ -0.67
MSH2-206ENST00000543555 PMCHP20382 165 aa10.84□□□□□ -0.67
MSH2-206ENST00000543555 KLF5Q13887 457 aaPredicted RBP10.84□□□□□ -0.67
MSH2-206ENST00000543555 KLK9Q2XQG4 91 aa10.84□□□□□ -0.67
MSH2-206ENST00000543555 TOMM20LQ6UXN7 152 aa10.84□□□□□ -0.67
MSH2-206ENST00000543555 ALKBH7Q9BT30 221 aaPredicted RBP10.84□□□□□ -0.67
MSH2-206ENST00000543555 RABAC1Q9UI14 185 aa10.84□□□□□ -0.67
MSH2-206ENST00000543555 KLK9Q9UKQ9 250 aa10.84□□□□□ -0.67
MSH2-206ENST00000543555 PRB4P10163 310 aaPredicted RBP10.84□□□□□ -0.67
MSH2-206ENST00000543555 RPL7P18124 248 aaKnown RBP10.84□□□□□ -0.67
MSH2-206ENST00000543555 C1orf194Q5T5A4 169 aa10.84□□□□□ -0.67
MSH2-206ENST00000543555 NRN1Q9NPD7 142 aa10.84□□□□□ -0.67
MSH2-206ENST00000543555 RNF114Q9Y508 228 aa10.84□□□□□ -0.67
MSH2-206ENST00000543555 C15orf32Q32M92 178 aa10.84□□□□□ -0.67
MSH2-206ENST00000543555 ZNF502Q8TBZ5 544 aa10.84□□□□□ -0.67
MSH2-206ENST00000543555 ASCL2Q99929 193 aa10.84□□□□□ -0.67
MSH2-206ENST00000543555 NDUFAF3Q9BU61 184 aa10.84□□□□□ -0.67
MSH2-206ENST00000543555 UNC79Q9P2D8 2635 aa10.83□□□□□ -0.68
MSH2-206ENST00000543555 KIR2DL5BA0A0G2JN68 375 aa10.83□□□□□ -0.68
MSH2-206ENST00000543555 KIR2DL5BA0A0G2JPC4 375 aa10.83□□□□□ -0.68
MSH2-206ENST00000543555 COX6B1P14854 86 aa10.83□□□□□ -0.68
MSH2-206ENST00000543555 PSG9Q00887 426 aa10.83□□□□□ -0.68
MSH2-206ENST00000543555 KIR2DL5AQ8N109 375 aa10.83□□□□□ -0.68
MSH2-206ENST00000543555 RHOGP84095 191 aa10.83□□□□□ -0.68
MSH2-206ENST00000543555 PAX8Q06710 450 aa10.83□□□□□ -0.68
MSH2-206ENST00000543555 TEX43Q6ZNM6 134 aa10.83□□□□□ -0.68
MSH2-206ENST00000543555 TLN2Q9Y4G6 2542 aa10.82□□□□□ -0.68
MSH2-206ENST00000543555 GPR183P32249 361 aa10.82□□□□□ -0.68
MSH2-206ENST00000543555 CSPG4Q6UVK1 2322 aa10.82□□□□□ -0.68
MSH2-206ENST00000543555 SH2D7A6NKC9 451 aaPredicted RBP10.82□□□□□ -0.68
MSH2-206ENST00000543555 CSN1S1P47710 185 aa10.82□□□□□ -0.68
MSH2-206ENST00000543555 PIMREGQ9BSJ6 248 aa10.82□□□□□ -0.68
MSH2-206ENST00000543555 SERTM2A0A1B0GWG4 89 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 108.2 ms