RNA–Protein interactions for RNA: ENST00000542033.5

USP28-210, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 2

Gene USP28, Length 852 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-210ENST00000542033 CRYGSP22914 178 aa2.27□□□□□ -2.05
USP28-210ENST00000542033 NMUP48645 174 aa2.27□□□□□ -2.05
USP28-210ENST00000542033 PPP1CBP62140 327 aa2.27□□□□□ -2.05
USP28-210ENST00000542033 SLC38A11Q08AI6 406 aa2.27□□□□□ -2.05
USP28-210ENST00000542033 IL15RAQ13261 267 aa2.27□□□□□ -2.05
USP28-210ENST00000542033 EIF3IQ13347 325 aaKnown RBP2.27□□□□□ -2.05
USP28-210ENST00000542033 ZNF141Q15928 474 aa2.27□□□□□ -2.05
USP28-210ENST00000542033 ETDBQ3ZM63 59 aa2.27□□□□□ -2.05
USP28-210ENST00000542033 Q56UQ5 140 aa2.27□□□□□ -2.05
USP28-210ENST00000542033 CASC10Q5T4H9 136 aa2.27□□□□□ -2.05
USP28-210ENST00000542033 C9orf153Q5TBE3 101 aa2.27□□□□□ -2.05
USP28-210ENST00000542033 LYRM7Q5U5X0 104 aa2.27□□□□□ -2.05
USP28-210ENST00000542033 LCN12Q6JVE5 192 aa2.27□□□□□ -2.05
USP28-210ENST00000542033 HRCT1Q6UXD1 115 aa2.27□□□□□ -2.05
USP28-210ENST00000542033 ACP7Q6ZNF0 438 aa2.27□□□□□ -2.05
USP28-210ENST00000542033 TMEM136Q6ZRR5 245 aa2.27□□□□□ -2.05
USP28-210ENST00000542033 SPATA12Q7Z6I5 190 aa2.27□□□□□ -2.05
USP28-210ENST00000542033 TMEM150AQ86TG1 271 aa2.27□□□□□ -2.05
USP28-210ENST00000542033 BAGE3Q86Y29 109 aa2.27□□□□□ -2.05
USP28-210ENST00000542033 BAGE2Q86Y30 109 aa2.27□□□□□ -2.05
USP28-210ENST00000542033 SGPP2Q8IWX5 399 aa2.27□□□□□ -2.05
USP28-210ENST00000542033 MSRB3Q8IXL7 192 aa2.27□□□□□ -2.05
USP28-210ENST00000542033 C10orf126Q8N4M7 172 aa2.27□□□□□ -2.05
USP28-210ENST00000542033 WDR31Q8NA23 367 aa2.27□□□□□ -2.05
USP28-210ENST00000542033 OR8B3Q8NGG8 313 aa2.27□□□□□ -2.05
USP28-210ENST00000542033 OR10AC1Q8NH08 325 aa2.27□□□□□ -2.05
USP28-210ENST00000542033 CLDND2Q8NHS1 167 aa2.27□□□□□ -2.05
USP28-210ENST00000542033 MYOZ3Q8TDC0 251 aa2.27□□□□□ -2.05
USP28-210ENST00000542033 C7orf33Q8WU49 177 aa2.27□□□□□ -2.05
USP28-210ENST00000542033 COPS9Q8WXC6 57 aa2.27□□□□□ -2.05
USP28-210ENST00000542033 DPH3Q96FX2 82 aa2.27□□□□□ -2.05
USP28-210ENST00000542033 SLC25A44Q96H78 314 aaPredicted RBP2.27□□□□□ -2.05
USP28-210ENST00000542033 C2orf50Q96LR7 162 aa2.27□□□□□ -2.05
USP28-210ENST00000542033 PRELID3AQ96N28 172 aa2.27□□□□□ -2.05
USP28-210ENST00000542033 OR2A5Q96R48 311 aa2.27□□□□□ -2.05
USP28-210ENST00000542033 OR8B2Q96RD0 313 aa2.27□□□□□ -2.05
USP28-210ENST00000542033 C20orf78Q9BR46 151 aa2.27□□□□□ -2.05
USP28-210ENST00000542033 GNB1LQ9BYB4 327 aa2.27□□□□□ -2.05
USP28-210ENST00000542033 MRPL20Q9BYC9 149 aaKnown RBP2.27□□□□□ -2.05
USP28-210ENST00000542033 ZNF442Q9H7R0 627 aa2.27□□□□□ -2.05
USP28-210ENST00000542033 ANAPC11Q9NYG5 84 aa2.27□□□□□ -2.05
USP28-210ENST00000542033 C21orf62Q9NYP8 219 aa2.27□□□□□ -2.05
USP28-210ENST00000542033 KLF12Q9Y4X4 402 aa2.27□□□□□ -2.05
USP28-210ENST00000542033 NEUROG3Q9Y4Z2 214 aa2.27□□□□□ -2.05
USP28-210ENST00000542033 SLC25A15Q9Y619 301 aa2.27□□□□□ -2.05
USP28-210ENST00000542033 LOC285556D6RIA3 1793 aa2.27□□□□□ -2.05
USP28-210ENST00000542033 ROBO1Q9Y6N7 1651 aa2.27□□□□□ -2.05
USP28-210ENST00000542033 PHF3Q92576 2039 aaKnown RBP2.27□□□□□ -2.05
USP28-210ENST00000542033 MCM3APO60318 1980 aa2.27□□□□□ -2.05
USP28-210ENST00000542033 KCPQ6ZWJ8 1503 aa2.27□□□□□ -2.05
USP28-210ENST00000542033 MYO16Q9Y6X6 1858 aa2.26□□□□□ -2.05
USP28-210ENST00000542033 SIP14410 1827 aa2.26□□□□□ -2.05
USP28-210ENST00000542033 ZNF236Q9UL36 1845 aa2.26□□□□□ -2.05
USP28-210ENST00000542033 CCDC88CQ9P219 2028 aa2.26□□□□□ -2.05
USP28-210ENST00000542033 CCL15-CCL14A0A0B4J2E2 113 aa2.26□□□□□ -2.05
USP28-210ENST00000542033 PIGBOS1A0A0B4J2F0 54 aa2.26□□□□□ -2.05
USP28-210ENST00000542033 TRBV7-7A0A0K0K1E9 115 aa2.26□□□□□ -2.05
USP28-210ENST00000542033 FAM236DA0A1B0GTK5 79 aa2.26□□□□□ -2.05
USP28-210ENST00000542033 LOC107986453A0A1B0GWG9 222 aa2.26□□□□□ -2.05
USP28-210ENST00000542033 LY6LH3BQJ8 138 aa2.26□□□□□ -2.05
USP28-210ENST00000542033 J3QQQ9 107 aa2.26□□□□□ -2.05
USP28-210ENST00000542033 NUPR1O60356 82 aa2.26□□□□□ -2.05
USP28-210ENST00000542033 DEDDO75618 318 aa2.26□□□□□ -2.05
USP28-210ENST00000542033 IGHV3-7P01780 117 aa2.26□□□□□ -2.05
USP28-210ENST00000542033 OR5AL1P0C617 328 aa2.26□□□□□ -2.05
USP28-210ENST00000542033 FAM236CP0DP71 79 aa2.26□□□□□ -2.05
USP28-210ENST00000542033 CPMP14384 443 aa2.26□□□□□ -2.05
USP28-210ENST00000542033 IL3RAP26951 378 aa2.26□□□□□ -2.05
USP28-210ENST00000542033 HLA-DMBP28068 263 aa2.26□□□□□ -2.05
USP28-210ENST00000542033 MPV17P39210 176 aa2.26□□□□□ -2.05
USP28-210ENST00000542033 APOC4P55056 127 aa2.26□□□□□ -2.05
USP28-210ENST00000542033 TAS2R45P59539 299 aa2.26□□□□□ -2.05
USP28-210ENST00000542033 UBE2G1P62253 170 aa2.26□□□□□ -2.05
USP28-210ENST00000542033 SP4Q02446 784 aa2.26□□□□□ -2.05
USP28-210ENST00000542033 PRDX1Q06830 199 aaKnown RBP2.26□□□□□ -2.05
USP28-210ENST00000542033 EBI3Q14213 229 aa2.26□□□□□ -2.05
USP28-210ENST00000542033 ELOCQ15369 112 aa2.26□□□□□ -2.05
USP28-210ENST00000542033 NMSQ5H8A3 153 aa2.26□□□□□ -2.05
USP28-210ENST00000542033 FAM27D1Q5T7N8 215 aa2.26□□□□□ -2.05
USP28-210ENST00000542033 NOXRED1Q6NXP6 359 aa2.26□□□□□ -2.05
USP28-210ENST00000542033 Q6ZS49 121 aa2.26□□□□□ -2.05
USP28-210ENST00000542033 RPS27LQ71UM5 84 aaKnown RBP2.26□□□□□ -2.05
USP28-210ENST00000542033 TCF23Q7RTU1 214 aa2.26□□□□□ -2.05
USP28-210ENST00000542033 ZNF550Q7Z398 422 aa2.26□□□□□ -2.05
USP28-210ENST00000542033 TEN1Q86WV5 123 aa2.26□□□□□ -2.05
USP28-210ENST00000542033 RPS19BP1Q86WX3 136 aaKnown RBP2.26□□□□□ -2.05
USP28-210ENST00000542033 VKORC1L1Q8N0U8 176 aa2.26□□□□□ -2.05
USP28-210ENST00000542033 DEFB106AQ8N104 65 aa2.26□□□□□ -2.05
USP28-210ENST00000542033 NPWQ8N729 165 aa2.26□□□□□ -2.05
USP28-210ENST00000542033 C14orf178Q8N769 122 aaPredicted RBP2.26□□□□□ -2.05
USP28-210ENST00000542033 C15orf53Q8NAA6 179 aa2.26□□□□□ -2.05
USP28-210ENST00000542033 LINC01006Q8NI28 216 aa2.26□□□□□ -2.05
USP28-210ENST00000542033 CT55Q8WUE5 264 aa2.26□□□□□ -2.05
USP28-210ENST00000542033 LINC01600Q96MT4 127 aa2.26□□□□□ -2.05
USP28-210ENST00000542033 AMELYQ99218 206 aa2.26□□□□□ -2.05
USP28-210ENST00000542033 GPR21Q99679 349 aa2.26□□□□□ -2.05
USP28-210ENST00000542033 NAA38Q9BRA0 125 aaKnown RBP2.26□□□□□ -2.05
USP28-210ENST00000542033 RTL8AQ9BWD3 113 aa2.26□□□□□ -2.05
USP28-210ENST00000542033 DEFB127Q9H1M4 99 aa2.26□□□□□ -2.05
USP28-210ENST00000542033 PRO0461Q9UI25 63 aa2.26□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms