RNA–Protein interactions for RNA: ENST00000540113.5

C11orf54-214, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 1 (best) BASIC

Gene C11orf54, Length 2,442 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-214ENST00000540113 MIEN1Q9BRT3 115 aa9.04□□□□□ -0.96
C11orf54-214ENST00000540113 UBTD1Q9HAC8 227 aa9.04□□□□□ -0.96
C11orf54-214ENST00000540113 F8W735 103 aaPredicted RBP9.03□□□□□ -0.96
C11orf54-214ENST00000540113 HOXB4P17483 251 aaPredicted RBP9.03□□□□□ -0.96
C11orf54-214ENST00000540113 G0S2P27469 103 aa9.03□□□□□ -0.96
C11orf54-214ENST00000540113 NUTF2P61970 127 aaKnown RBP9.03□□□□□ -0.96
C11orf54-214ENST00000540113 TM4SF20Q53R12 229 aa9.03□□□□□ -0.96
C11orf54-214ENST00000540113 SPATA12Q7Z6I5 190 aa9.03□□□□□ -0.96
C11orf54-214ENST00000540113 SVIPQ8NHG7 77 aa9.03□□□□□ -0.96
C11orf54-214ENST00000540113 ARPC1AQ92747 370 aa9.03□□□□□ -0.96
C11orf54-214ENST00000540113 SRSF8Q9BRL6 282 aaKnown RBP9.03□□□□□ -0.96
C11orf54-214ENST00000540113 TPPP3Q9BW30 176 aa9.03□□□□□ -0.96
C11orf54-214ENST00000540113 ZNF414Q96IQ9 312 aa9.03□□□□□ -0.96
C11orf54-214ENST00000540113 ZNF492Q9P255 531 aa9.03□□□□□ -0.96
C11orf54-214ENST00000540113 IGLV11-55A0A075B6I3 123 aa9.02□□□□□ -0.97
C11orf54-214ENST00000540113 TMSB15BA0A087X1C1 80 aa9.02□□□□□ -0.97
C11orf54-214ENST00000540113 FAM181BA6NEQ2 426 aa9.02□□□□□ -0.97
C11orf54-214ENST00000540113 MRPS12O15235 138 aaKnown RBP9.02□□□□□ -0.97
C11orf54-214ENST00000540113 CRIP1P50238 77 aa9.02□□□□□ -0.97
C11orf54-214ENST00000540113 LINC01559Q495D7 138 aa9.02□□□□□ -0.97
C11orf54-214ENST00000540113 RBPMS2Q6ZRY4 209 aaKnown RBP9.02□□□□□ -0.97
C11orf54-214ENST00000540113 LINC00173Q6ZV60 143 aa9.02□□□□□ -0.97
C11orf54-214ENST00000540113 PSG8Q9UQ74 426 aa9.02□□□□□ -0.97
C11orf54-214ENST00000540113 TIMM8BQ9Y5J9 83 aaPredicted RBP9.02□□□□□ -0.97
C11orf54-214ENST00000540113 MUC21A0A0G2JKD1 596 aa9.02□□□□□ -0.97
C11orf54-214ENST00000540113 MUC21A0A140T8X8 626 aa9.02□□□□□ -0.97
C11orf54-214ENST00000540113 WI2-2373I1.2A0A1W2PRP0 233 aa9.02□□□□□ -0.97
C11orf54-214ENST00000540113 TCAPO15273 167 aa9.02□□□□□ -0.97
C11orf54-214ENST00000540113 GNLYP22749 145 aa9.02□□□□□ -0.97
C11orf54-214ENST00000540113 KLF5Q13887 457 aaPredicted RBP9.02□□□□□ -0.97
C11orf54-214ENST00000540113 LBHQ53QV2 105 aaPredicted RBP9.02□□□□□ -0.97
C11orf54-214ENST00000540113 MUC21Q5SSG8 566 aa9.02□□□□□ -0.97
C11orf54-214ENST00000540113 C1orf122Q6ZSJ8 110 aa9.02□□□□□ -0.97
C11orf54-214ENST00000540113 ATP5L2Q7Z4Y8 100 aa9.02□□□□□ -0.97
C11orf54-214ENST00000540113 Q8N6K4 173 aa9.02□□□□□ -0.97
C11orf54-214ENST00000540113 SMIM12Q96EX1 92 aa9.02□□□□□ -0.97
C11orf54-214ENST00000540113 SIRPDQ9H106 197 aa9.02□□□□□ -0.97
C11orf54-214ENST00000540113 LPAR2Q9HBW0 351 aa9.02□□□□□ -0.97
C11orf54-214ENST00000540113 CSN3P07498 182 aa9.01□□□□□ -0.97
C11orf54-214ENST00000540113 ARMS2P0C7Q2 107 aa9.01□□□□□ -0.97
C11orf54-214ENST00000540113 TMEM11P17152 192 aa9.01□□□□□ -0.97
C11orf54-214ENST00000540113 CTRLP40313 264 aa9.01□□□□□ -0.97
C11orf54-214ENST00000540113 ZNF562Q6V9R5 426 aa9.01□□□□□ -0.97
C11orf54-214ENST00000540113 OVOL3O00110 214 aa9.01□□□□□ -0.97
C11orf54-214ENST00000540113 CHEK1O14757 476 aa9.01□□□□□ -0.97
C11orf54-214ENST00000540113 EGR2P11161 476 aaPredicted RBP9.01□□□□□ -0.97
C11orf54-214ENST00000540113 HLA-DMBP28068 263 aa9.01□□□□□ -0.97
C11orf54-214ENST00000540113 MFAP4P55083 255 aa9.01□□□□□ -0.97
C11orf54-214ENST00000540113 MCRIP2Q9BUT9 160 aaKnown RBP9.01□□□□□ -0.97
C11orf54-214ENST00000540113 C21orf62Q9NYP8 219 aa9.01□□□□□ -0.97
C11orf54-214ENST00000540113 TP73-AS1Q9UF72 201 aa9.01□□□□□ -0.97
C11orf54-214ENST00000540113 IGKV2-40A0A087WW87 121 aaPredicted RBP9□□□□□ -0.97
C11orf54-214ENST00000540113 NPIPB6E9PJ23 425 aa9□□□□□ -0.97
C11orf54-214ENST00000540113 IGKV2D-40P01614 121 aaPredicted RBP9□□□□□ -0.97
C11orf54-214ENST00000540113 PSG3Q16557 428 aa9□□□□□ -0.97
C11orf54-214ENST00000540113 OR4B1Q8NGF8 309 aa9□□□□□ -0.97
C11orf54-214ENST00000540113 IGHV7-81A0A0B4J1V7 117 aa9□□□□□ -0.97
C11orf54-214ENST00000540113 PRSS47A8MTI9 375 aa9□□□□□ -0.97
C11orf54-214ENST00000540113 APOHP02749 345 aaPredicted RBP9□□□□□ -0.97
C11orf54-214ENST00000540113 TFPI2P48307 235 aa9□□□□□ -0.97
C11orf54-214ENST00000540113 EFNA4P52798 201 aa9□□□□□ -0.97
C11orf54-214ENST00000540113 ECSCRQ19T08 205 aa9□□□□□ -0.97
C11orf54-214ENST00000540113 CT83Q5H943 113 aa9□□□□□ -0.97
C11orf54-214ENST00000540113 AJUBAQ96IF1 538 aa9□□□□□ -0.97
C11orf54-214ENST00000540113 PKD1L2Q7Z442 2459 aa8.99□□□□□ -0.97
C11orf54-214ENST00000540113 C2orf70A6NJV1 201 aa8.99□□□□□ -0.97
C11orf54-214ENST00000540113 LINC01548A6NM66 108 aa8.99□□□□□ -0.97
C11orf54-214ENST00000540113 NPIPB5A8MRT5 1133 aa8.99□□□□□ -0.97
C11orf54-214ENST00000540113 EBI3Q14213 229 aa8.99□□□□□ -0.97
C11orf54-214ENST00000540113 TTC9CQ8N5M4 171 aa8.99□□□□□ -0.97
C11orf54-214ENST00000540113 TMEM75Q8N9X5 138 aa8.99□□□□□ -0.97
C11orf54-214ENST00000540113 C1RLQ9NZP8 487 aa8.99□□□□□ -0.97
C11orf54-214ENST00000540113 IGHV3OR16-10A0A075B7F0 116 aa8.99□□□□□ -0.97
C11orf54-214ENST00000540113 LOC102724200A0A096LPH7 203 aaPredicted RBP8.99□□□□□ -0.97
C11orf54-214ENST00000540113 IGHV3-66A0A0C4DH42 116 aa8.99□□□□□ -0.97
C11orf54-214ENST00000540113 IGHV2-70DA0A0C4DH43 119 aa8.99□□□□□ -0.97
C11orf54-214ENST00000540113 H0Y8G0 127 aa8.99□□□□□ -0.97
C11orf54-214ENST00000540113 MINOS1Q5TGZ0 78 aa8.99□□□□□ -0.97
C11orf54-214ENST00000540113 Q8TAT8 98 aa8.99□□□□□ -0.97
C11orf54-214ENST00000540113 MINOS1-NBL1R4GNA1 71 aa8.99□□□□□ -0.97
C11orf54-214ENST00000540113 MAP1AP78559 2803 aaPredicted RBP8.98□□□□□ -0.97
C11orf54-214ENST00000540113 IGHV3OR16-13A0A075B7E8 117 aa8.98□□□□□ -0.97
C11orf54-214ENST00000540113 IGHV3-74A0A0B4J1X5 117 aa8.98□□□□□ -0.97
C11orf54-214ENST00000540113 IGHV1-24A0A0C4DH33 117 aa8.98□□□□□ -0.97
C11orf54-214ENST00000540113 OOSP1A8MZH6 123 aa8.98□□□□□ -0.97
C11orf54-214ENST00000540113 CTSGP08311 255 aa8.98□□□□□ -0.97
C11orf54-214ENST00000540113 LMO4P61968 165 aa8.98□□□□□ -0.97
C11orf54-214ENST00000540113 CCDC144NLQ6NUI1 221 aa8.98□□□□□ -0.97
C11orf54-214ENST00000540113 Q8N9W7 124 aa8.98□□□□□ -0.97
C11orf54-214ENST00000540113 GFRA4Q9GZZ7 299 aa8.98□□□□□ -0.97
C11orf54-214ENST00000540113 IGLC3P0DOY3 106 aa8.97□□□□□ -0.97
C11orf54-214ENST00000540113 BTF3P20290 206 aaKnown RBP8.97□□□□□ -0.97
C11orf54-214ENST00000540113 C16orf54Q6UWD8 224 aa8.97□□□□□ -0.97
C11orf54-214ENST00000540113 Q6ZN92 141 aa8.97□□□□□ -0.97
C11orf54-214ENST00000540113 TXN2Q99757 166 aa8.97□□□□□ -0.97
C11orf54-214ENST00000540113 BPESC1Q9GZL8 116 aa8.97□□□□□ -0.97
C11orf54-214ENST00000540113 AAMDCQ9H7C9 122 aa8.97□□□□□ -0.97
C11orf54-214ENST00000540113 SMAD5-AS1Q9Y6J3 95 aa8.97□□□□□ -0.97
C11orf54-214ENST00000540113 TRAV30A0A087WSZ9 112 aa8.97□□□□□ -0.97
C11orf54-214ENST00000540113 G3V318 75 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms