RNA–Protein interactions for RNA: ENST00000540109.5

PTPRD-214, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 6,210 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-214ENST00000540109 ATP5EP56381 51 aaPredicted RBP4.96□□□□□ -1.62
PTPRD-214ENST00000540109 DEFB127Q9H1M4 99 aa4.96□□□□□ -1.62
PTPRD-214ENST00000540109 IGKV1D-8A0A087WSZ0 117 aa4.95□□□□□ -1.62
PTPRD-214ENST00000540109 IGHV3-48P01763 117 aa4.95□□□□□ -1.62
PTPRD-214ENST00000540109 VWC2Q2TAL6 325 aa4.95□□□□□ -1.62
PTPRD-214ENST00000540109 MDP1Q86V88 176 aa4.95□□□□□ -1.62
PTPRD-214ENST00000540109 DEFB124Q8NES8 71 aa4.95□□□□□ -1.62
PTPRD-214ENST00000540109 IGKV1-12A0A0C4DH73 117 aa4.95□□□□□ -1.62
PTPRD-214ENST00000540109 FAM90A27PA6NNH2 459 aa4.95□□□□□ -1.62
PTPRD-214ENST00000540109 IGKV1D-12P01611 117 aa4.95□□□□□ -1.62
PTPRD-214ENST00000540109 HLA-DMBP28068 263 aa4.95□□□□□ -1.62
PTPRD-214ENST00000540109 RPL27AP46776 148 aaKnown RBP4.95□□□□□ -1.62
PTPRD-214ENST00000540109 Q6Q795 121 aa4.95□□□□□ -1.62
PTPRD-214ENST00000540109 PRR7Q8TB68 274 aa4.95□□□□□ -1.62
PTPRD-214ENST00000540109 SPRR3Q9UBC9 169 aa4.95□□□□□ -1.62
PTPRD-214ENST00000540109 K7EN84 100 aa4.95□□□□□ -1.62
PTPRD-214ENST00000540109 CD3EP07766 207 aa4.95□□□□□ -1.62
PTPRD-214ENST00000540109 RSPO4Q2I0M5 234 aaPredicted RBP4.95□□□□□ -1.62
PTPRD-214ENST00000540109 FGFBP3Q8TAT2 258 aa4.95□□□□□ -1.62
PTPRD-214ENST00000540109 MRPL20Q9BYC9 149 aaKnown RBP4.95□□□□□ -1.62
PTPRD-214ENST00000540109 DLX6P56179 175 aa4.95□□□□□ -1.62
PTPRD-214ENST00000540109 PRB3Q04118 309 aaPredicted RBP4.95□□□□□ -1.62
PTPRD-214ENST00000540109 HEATR1Q9H583 2144 aaKnown RBP4.95□□□□□ -1.62
PTPRD-214ENST00000540109 TRAV21A0A0B4J279 112 aa4.95□□□□□ -1.62
PTPRD-214ENST00000540109 C5orf63A6NC05 138 aa4.95□□□□□ -1.62
PTPRD-214ENST00000540109 TEN1Q86WV5 123 aa4.95□□□□□ -1.62
PTPRD-214ENST00000540109 MBD3L4A6NDZ8 208 aaPredicted RBP4.94□□□□□ -1.62
PTPRD-214ENST00000540109 MBD3L3A6NE82 208 aaPredicted RBP4.94□□□□□ -1.62
PTPRD-214ENST00000540109 MBD3L5A6NJ08 208 aaPredicted RBP4.94□□□□□ -1.62
PTPRD-214ENST00000540109 MBD3L2Q8NHZ7 208 aaPredicted RBP4.94□□□□□ -1.62
PTPRD-214ENST00000540109 PHF3Q92576 2039 aaKnown RBP4.94□□□□□ -1.62
PTPRD-214ENST00000540109 H3BMM0 161 aa4.94□□□□□ -1.62
PTPRD-214ENST00000540109 SLC25A16P16260 332 aa4.94□□□□□ -1.62
PTPRD-214ENST00000540109 NBL1P41271 181 aa4.94□□□□□ -1.62
PTPRD-214ENST00000540109 UBE2WQ96B02 151 aa4.94□□□□□ -1.62
PTPRD-214ENST00000540109 RNF5Q99942 180 aa4.94□□□□□ -1.62
PTPRD-214ENST00000540109 SLC25A15Q9Y619 301 aa4.94□□□□□ -1.62
PTPRD-214ENST00000540109 MT-ATP8P03928 68 aa4.94□□□□□ -1.62
PTPRD-214ENST00000540109 CCL11P51671 97 aa4.94□□□□□ -1.62
PTPRD-214ENST00000540109 RPL15P61313 204 aaKnown RBP4.94□□□□□ -1.62
PTPRD-214ENST00000540109 RNF182Q8N6D2 247 aa4.94□□□□□ -1.62
PTPRD-214ENST00000540109 IGKV3-15P01624 115 aa4.94□□□□□ -1.62
PTPRD-214ENST00000540109 FAM53AQ6NSI3 398 aaPredicted RBP4.94□□□□□ -1.62
PTPRD-214ENST00000540109 LRRC75A-AS1Q8N1F1 130 aa4.94□□□□□ -1.62
PTPRD-214ENST00000540109 FABP5P3A8MUU1 101 aa4.94□□□□□ -1.62
PTPRD-214ENST00000540109 H3BT86 120 aa4.94□□□□□ -1.62
PTPRD-214ENST00000540109 NPYP01303 97 aa4.94□□□□□ -1.62
PTPRD-214ENST00000540109 WFDC11Q8NEX6 87 aa4.94□□□□□ -1.62
PTPRD-214ENST00000540109 DLL3Q9NYJ7 618 aa4.94□□□□□ -1.62
PTPRD-214ENST00000540109 WNT9BO14905 357 aa4.93□□□□□ -1.62
PTPRD-214ENST00000540109 ZC2HC1BQ5TFG8 222 aa4.93□□□□□ -1.62
PTPRD-214ENST00000540109 PCSK4Q6UW60 755 aa4.93□□□□□ -1.62
PTPRD-214ENST00000540109 ACP7Q6ZNF0 438 aa4.93□□□□□ -1.62
PTPRD-214ENST00000540109 MRPL55Q7Z7F7 128 aaKnown RBP4.93□□□□□ -1.62
PTPRD-214ENST00000540109 AMN1Q8IY45 258 aa4.93□□□□□ -1.62
PTPRD-214ENST00000540109 CGB1A6NKQ9 187 aa4.93□□□□□ -1.62
PTPRD-214ENST00000540109 PRB2P02812 416 aaPredicted RBP4.93□□□□□ -1.62
PTPRD-214ENST00000540109 SEC61GP60059 68 aa4.93□□□□□ -1.62
PTPRD-214ENST00000540109 RNF144BQ7Z419 303 aa4.93□□□□□ -1.62
PTPRD-214ENST00000540109 ANKRD29Q8N6D5 301 aa4.93□□□□□ -1.62
PTPRD-214ENST00000540109 TNFRSF18Q9Y5U5 241 aa4.93□□□□□ -1.62
PTPRD-214ENST00000540109 PCSK5Q92824 1860 aa4.93□□□□□ -1.62
PTPRD-214ENST00000540109 TRAV8-3A0A0A6YYJ7 113 aa4.93□□□□□ -1.62
PTPRD-214ENST00000540109 TMEM213A2RRL7 107 aa4.93□□□□□ -1.62
PTPRD-214ENST00000540109 IGLV1-44P01699 117 aa4.93□□□□□ -1.62
PTPRD-214ENST00000540109 LMO1P25800 156 aa4.93□□□□□ -1.62
PTPRD-214ENST00000540109 NPC2P61916 151 aa4.93□□□□□ -1.62
PTPRD-214ENST00000540109 TEX45Q8NA69 505 aa4.93□□□□□ -1.62
PTPRD-214ENST00000540109 TMEM141Q96I45 108 aa4.93□□□□□ -1.62
PTPRD-214ENST00000540109 IGHV1-2P23083 117 aa4.93□□□□□ -1.62
PTPRD-214ENST00000540109 RRN3P1Q2M238 152 aa4.93□□□□□ -1.62
PTPRD-214ENST00000540109 PTH2Q96A98 100 aa4.93□□□□□ -1.62
PTPRD-214ENST00000540109 SPATA25Q9BR10 227 aa4.93□□□□□ -1.62
PTPRD-214ENST00000540109 C20orf78Q9BR46 151 aa4.93□□□□□ -1.62
PTPRD-214ENST00000540109 RNF7Q9UBF6 113 aa4.93□□□□□ -1.62
PTPRD-214ENST00000540109 TRAV13-1A0A0B4J241 112 aa4.92□□□□□ -1.62
PTPRD-214ENST00000540109 CELA3BP08861 270 aa4.92□□□□□ -1.62
PTPRD-214ENST00000540109 C19orf54Q5BKX5 351 aa4.92□□□□□ -1.62
PTPRD-214ENST00000540109 ZNF497Q6ZNH5 498 aa4.92□□□□□ -1.62
PTPRD-214ENST00000540109 FDCSPQ8NFU4 85 aa4.92□□□□□ -1.62
PTPRD-214ENST00000540109 IGHV3-64A0A075B6Q5 118 aa4.92□□□□□ -1.62
PTPRD-214ENST00000540109 NCR2O95944 276 aa4.92□□□□□ -1.62
PTPRD-214ENST00000540109 MPV17P39210 176 aa4.92□□□□□ -1.62
PTPRD-214ENST00000540109 LAGE3Q14657 143 aa4.92□□□□□ -1.62
PTPRD-214ENST00000540109 D6R8Y8 96 aa4.92□□□□□ -1.62
PTPRD-214ENST00000540109 DEFB109BQ30KR1 87 aa4.92□□□□□ -1.62
PTPRD-214ENST00000540109 SIGLEC15Q6ZMC9 328 aa4.92□□□□□ -1.62
PTPRD-214ENST00000540109 TP73-AS1Q9UF72 201 aa4.92□□□□□ -1.62
PTPRD-214ENST00000540109 DOCK11Q5JSL3 2073 aa4.92□□□□□ -1.62
PTPRD-214ENST00000540109 IGKV1D-13A0A0B4J2D9 117 aa4.92□□□□□ -1.62
PTPRD-214ENST00000540109 SMIM27A0A1W2PRY6 76 aa4.92□□□□□ -1.62
PTPRD-214ENST00000540109 FAM106CPP0CH98 169 aa4.92□□□□□ -1.62
PTPRD-214ENST00000540109 IGKV1-13P0DP09 117 aa4.92□□□□□ -1.62
PTPRD-214ENST00000540109 TCF15Q12870 199 aa4.92□□□□□ -1.62
PTPRD-214ENST00000540109 FAM106AQ4KMX7 169 aa4.92□□□□□ -1.62
PTPRD-214ENST00000540109 ASPHD1Q5U4P2 390 aa4.92□□□□□ -1.62
PTPRD-214ENST00000540109 FOXI2Q6ZQN5 318 aa4.92□□□□□ -1.62
PTPRD-214ENST00000540109 LINC00305Q7Z4B0 112 aa4.92□□□□□ -1.62
PTPRD-214ENST00000540109 LYZL6O75951 148 aa4.92□□□□□ -1.62
PTPRD-214ENST00000540109 CD69Q07108 199 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 239.3 ms