RNA–Protein interactions for RNA: ENST00000536483.1

PRKDC-207, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 834 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-207ENST00000536483 A8MTW9 85 aa9.02□□□□□ -0.97
PRKDC-207ENST00000536483 DEFB4AO15263 64 aa9.02□□□□□ -0.97
PRKDC-207ENST00000536483 NMBP08949 121 aa9.02□□□□□ -0.97
PRKDC-207ENST00000536483 PVALBP20472 110 aaPredicted RBP9.02□□□□□ -0.97
PRKDC-207ENST00000536483 GATA2P23769 480 aaPredicted RBP9.02□□□□□ -0.97
PRKDC-207ENST00000536483 GALR1P47211 349 aa9.02□□□□□ -0.97
PRKDC-207ENST00000536483 NUTF2P61970 127 aaKnown RBP9.02□□□□□ -0.97
PRKDC-207ENST00000536483 VWC2Q2TAL6 325 aa9.02□□□□□ -0.97
PRKDC-207ENST00000536483 FOXI2Q6ZQN5 318 aa9.02□□□□□ -0.97
PRKDC-207ENST00000536483 S100A7AQ86SG5 101 aa9.02□□□□□ -0.97
PRKDC-207ENST00000536483 Q8NAQ8 132 aa9.02□□□□□ -0.97
PRKDC-207ENST00000536483 OR1B1Q8NGR6 318 aa9.02□□□□□ -0.97
PRKDC-207ENST00000536483 SHANK2-AS3Q9BTD1 123 aa9.02□□□□□ -0.97
PRKDC-207ENST00000536483 TMEM147Q9BVK8 224 aa9.02□□□□□ -0.97
PRKDC-207ENST00000536483 C1QTNF4Q9BXJ3 329 aa9.02□□□□□ -0.97
PRKDC-207ENST00000536483 RNF24Q9Y225 148 aa9.02□□□□□ -0.97
PRKDC-207ENST00000536483 H3BRN7 92 aa9.01□□□□□ -0.97
PRKDC-207ENST00000536483 HYPMO75409 117 aa9.01□□□□□ -0.97
PRKDC-207ENST00000536483 SCGB1D2O95969 90 aa9.01□□□□□ -0.97
PRKDC-207ENST00000536483 MIFP14174 115 aa9.01□□□□□ -0.97
PRKDC-207ENST00000536483 ORM2P19652 201 aa9.01□□□□□ -0.97
PRKDC-207ENST00000536483 COMMD7Q86VX2 200 aa9.01□□□□□ -0.97
PRKDC-207ENST00000536483 C2CD4CQ8TF44 421 aa9.01□□□□□ -0.97
PRKDC-207ENST00000536483 RNF141Q8WVD5 230 aa9.01□□□□□ -0.97
PRKDC-207ENST00000536483 SLC25A39Q9BZJ4 359 aaPredicted RBP9.01□□□□□ -0.97
PRKDC-207ENST00000536483 HRH4Q9H3N8 390 aa9.01□□□□□ -0.97
PRKDC-207ENST00000536483 SAV1Q9H4B6 383 aaPredicted RBP9.01□□□□□ -0.97
PRKDC-207ENST00000536483 KRBOX1C9JBD0 128 aa9□□□□□ -0.97
PRKDC-207ENST00000536483 RPL12P30050 165 aaKnown RBP9□□□□□ -0.97
PRKDC-207ENST00000536483 S100A10P60903 97 aa9□□□□□ -0.97
PRKDC-207ENST00000536483 ALKAL2Q6UX46 152 aa9□□□□□ -0.97
PRKDC-207ENST00000536483 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9□□□□□ -0.97
PRKDC-207ENST00000536483 PATE2Q6UY27 113 aa9□□□□□ -0.97
PRKDC-207ENST00000536483 SAT2Q96F10 170 aaPredicted RBP9□□□□□ -0.97
PRKDC-207ENST00000536483 SLC25A31Q9H0C2 315 aa9□□□□□ -0.97
PRKDC-207ENST00000536483 CYTL1Q9NRR1 136 aa9□□□□□ -0.97
PRKDC-207ENST00000536483 LYRM2Q9NU23 88 aaPredicted RBP9□□□□□ -0.97
PRKDC-207ENST00000536483 OR5AC2Q9NZP5 309 aa9□□□□□ -0.97
PRKDC-207ENST00000536483 HIGD1AQ9Y241 93 aa9□□□□□ -0.97
PRKDC-207ENST00000536483 X6R8D5 127 aa9□□□□□ -0.97
PRKDC-207ENST00000536483 AGRNO00468 2067 aa9□□□□□ -0.97
PRKDC-207ENST00000536483 A0A087X0K7 114 aa8.99□□□□□ -0.97
PRKDC-207ENST00000536483 BORCS7-ASMTA0A0B4J1R7 106 aa8.99□□□□□ -0.97
PRKDC-207ENST00000536483 SMCO3A2RU48 225 aa8.99□□□□□ -0.97
PRKDC-207ENST00000536483 AGPAT2O15120 278 aa8.99□□□□□ -0.97
PRKDC-207ENST00000536483 MRPS12O15235 138 aaKnown RBP8.99□□□□□ -0.97
PRKDC-207ENST00000536483 LINC00869P0C866 280 aa8.99□□□□□ -0.97
PRKDC-207ENST00000536483 RPL7P18124 248 aaKnown RBP8.99□□□□□ -0.97
PRKDC-207ENST00000536483 VAMP2P63027 116 aa8.99□□□□□ -0.97
PRKDC-207ENST00000536483 UQCC3Q6UW78 93 aa8.99□□□□□ -0.97
PRKDC-207ENST00000536483 NEU1Q99519 415 aa8.99□□□□□ -0.97
PRKDC-207ENST00000536483 RSG1Q9BU20 258 aa8.99□□□□□ -0.97
PRKDC-207ENST00000536483 DNAH2Q9P225 4427 aa8.98□□□□□ -0.97
PRKDC-207ENST00000536483 ELOA3CA0A087WX78 387 aaPredicted RBP8.98□□□□□ -0.97
PRKDC-207ENST00000536483 A0A0J9YX75 114 aa8.98□□□□□ -0.97
PRKDC-207ENST00000536483 RAB19A4D1S5 217 aa8.98□□□□□ -0.97
PRKDC-207ENST00000536483 IGLL5B9A064 214 aa8.98□□□□□ -0.97
PRKDC-207ENST00000536483 TEX46H3BTG2 121 aa8.98□□□□□ -0.97
PRKDC-207ENST00000536483 SULT1A1P50225 295 aa8.98□□□□□ -0.97
PRKDC-207ENST00000536483 RAB5CP51148 216 aa8.98□□□□□ -0.97
PRKDC-207ENST00000536483 TCTAP57738 103 aa8.98□□□□□ -0.97
PRKDC-207ENST00000536483 BAXQ07812 192 aa8.98□□□□□ -0.97
PRKDC-207ENST00000536483 SLC38A11Q08AI6 406 aa8.98□□□□□ -0.97
PRKDC-207ENST00000536483 GDF5OSQ5U4N7 250 aa8.98□□□□□ -0.97
PRKDC-207ENST00000536483 ZNF705AQ6ZN79 300 aaPredicted RBP8.98□□□□□ -0.97
PRKDC-207ENST00000536483 TMEM252Q8N6L7 170 aa8.98□□□□□ -0.97
PRKDC-207ENST00000536483 ZNF709Q8N972 641 aa8.98□□□□□ -0.97
PRKDC-207ENST00000536483 MGST2Q99735 147 aa8.98□□□□□ -0.97
PRKDC-207ENST00000536483 SCRT1Q9BWW7 348 aa8.98□□□□□ -0.97
PRKDC-207ENST00000536483 ARV1Q9H2C2 271 aa8.98□□□□□ -0.97
PRKDC-207ENST00000536483 SLC25A22Q9H936 323 aa8.98□□□□□ -0.97
PRKDC-207ENST00000536483 RPRMQ9NS64 109 aa8.98□□□□□ -0.97
PRKDC-207ENST00000536483 APLNQ9ULZ1 77 aa8.98□□□□□ -0.97
PRKDC-207ENST00000536483 WDR83OSQ9Y284 106 aa8.98□□□□□ -0.97
PRKDC-207ENST00000536483 LSM5Q9Y4Y9 91 aaKnown RBP8.98□□□□□ -0.97
PRKDC-207ENST00000536483 RYR1P21817 5038 aa8.98□□□□□ -0.97
PRKDC-207ENST00000536483 FAT2Q9NYQ8 4349 aa8.98□□□□□ -0.97
PRKDC-207ENST00000536483 TRAV8-2A0A0B4J237 113 aa8.97□□□□□ -0.97
PRKDC-207ENST00000536483 FAM24AA6NFZ4 105 aa8.97□□□□□ -0.97
PRKDC-207ENST00000536483 ZNF705FA8MVS1 300 aaPredicted RBP8.97□□□□□ -0.97
PRKDC-207ENST00000536483 ZNF705DP0CH99 300 aaPredicted RBP8.97□□□□□ -0.97
PRKDC-207ENST00000536483 ZNF705BP0CI00 300 aaPredicted RBP8.97□□□□□ -0.97
PRKDC-207ENST00000536483 RBMY1A1P0DJD3 496 aaKnown RBP8.97□□□□□ -0.97
PRKDC-207ENST00000536483 RBMY1CP0DJD4 496 aa8.97□□□□□ -0.97
PRKDC-207ENST00000536483 CAV2P51636 162 aa8.97□□□□□ -0.97
PRKDC-207ENST00000536483 BLOC1S1P78537 153 aa8.97□□□□□ -0.97
PRKDC-207ENST00000536483 RBMY1FQ15415 496 aaKnown RBP8.97□□□□□ -0.97
PRKDC-207ENST00000536483 ATP6V1FQ16864 119 aa8.97□□□□□ -0.97
PRKDC-207ENST00000536483 CCDC28AQ8IWP9 274 aa8.97□□□□□ -0.97
PRKDC-207ENST00000536483 C16orf92Q96LL3 132 aa8.97□□□□□ -0.97
PRKDC-207ENST00000536483 C20orf173Q96LM9 149 aa8.97□□□□□ -0.97
PRKDC-207ENST00000536483 LINC00052Q96N35 136 aa8.97□□□□□ -0.97
PRKDC-207ENST00000536483 UQCC1Q9NVA1 299 aa8.97□□□□□ -0.97
PRKDC-207ENST00000536483 IGHV4-28A0A0C4DH34 117 aa8.96□□□□□ -0.98
PRKDC-207ENST00000536483 SMIM9A6NGZ8 99 aa8.96□□□□□ -0.98
PRKDC-207ENST00000536483 CST7O76096 145 aa8.96□□□□□ -0.98
PRKDC-207ENST00000536483 SEC11BP0C7V7 166 aa8.96□□□□□ -0.98
PRKDC-207ENST00000536483 RPL29P47914 159 aaKnown RBP8.96□□□□□ -0.98
PRKDC-207ENST00000536483 RAB31Q13636 194 aa8.96□□□□□ -0.98
PRKDC-207ENST00000536483 ZNF266Q14584 549 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 84.2 ms