RNA–Protein interactions for RNA: ENST00000535375.1

PRKDC-205, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 464 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-205ENST00000535375 POP5Q969H6 163 aaKnown RBP1.13□□□□□ -2.23
PRKDC-205ENST00000535375 OBSCN-AS1Q96MR7 158 aa1.13□□□□□ -2.23
PRKDC-205ENST00000535375 ODF3Q96PU9 254 aa1.13□□□□□ -2.23
PRKDC-205ENST00000535375 TP53RKQ96S44 253 aa1.13□□□□□ -2.23
PRKDC-205ENST00000535375 CACYBPQ9HB71 228 aaKnown RBP1.13□□□□□ -2.23
PRKDC-205ENST00000535375 LAMTOR3Q9UHA4 124 aa1.13□□□□□ -2.23
PRKDC-205ENST00000535375 ZFP30Q9Y2G7 519 aa1.13□□□□□ -2.23
PRKDC-205ENST00000535375 V9GYQ6 96 aa1.13□□□□□ -2.23
PRKDC-205ENST00000535375 FRMPD1Q5SYB0 1578 aa1.13□□□□□ -2.23
PRKDC-205ENST00000535375 ZCCHC11Q5TAX3 1644 aaKnown RBP1.12□□□□□ -2.23
PRKDC-205ENST00000535375 TRAV10A0A0B4J240 114 aa1.12□□□□□ -2.23
PRKDC-205ENST00000535375 ODAMA1E959 279 aa1.12□□□□□ -2.23
PRKDC-205ENST00000535375 MAP1LC3B2A6NCE7 125 aa1.12□□□□□ -2.23
PRKDC-205ENST00000535375 PGRMC1O00264 195 aaKnown RBP1.12□□□□□ -2.23
PRKDC-205ENST00000535375 MPV17LQ2QL34 196 aa1.12□□□□□ -2.23
PRKDC-205ENST00000535375 ST6GALNAC3Q8NDV1 305 aa1.12□□□□□ -2.23
PRKDC-205ENST00000535375 OR5D14Q8NGL3 314 aa1.12□□□□□ -2.23
PRKDC-205ENST00000535375 OR2H1Q9GZK4 316 aa1.12□□□□□ -2.23
PRKDC-205ENST00000535375 MAP1LC3BQ9GZQ8 125 aa1.12□□□□□ -2.23
PRKDC-205ENST00000535375 OTORQ9NRC9 128 aa1.12□□□□□ -2.23
PRKDC-205ENST00000535375 CDC42SE1Q9NRR8 79 aa1.12□□□□□ -2.23
PRKDC-205ENST00000535375 ATPIF1Q9UII2 106 aa1.12□□□□□ -2.23
PRKDC-205ENST00000535375 NUBP2Q9Y5Y2 271 aa1.12□□□□□ -2.23
PRKDC-205ENST00000535375 EPG5Q9HCE0 2579 aa1.12□□□□□ -2.23
PRKDC-205ENST00000535375 KDM6AO15550 1401 aaPredicted RBP1.12□□□□□ -2.23
PRKDC-205ENST00000535375 CELSR3Q9NYQ7 3312 aa1.12□□□□□ -2.23
PRKDC-205ENST00000535375 TECTAO75443 2155 aa1.11□□□□□ -2.23
PRKDC-205ENST00000535375 MYH2Q9UKX2 1941 aa1.11□□□□□ -2.23
PRKDC-205ENST00000535375 WDFY4Q6ZS81 3184 aa1.11□□□□□ -2.23
PRKDC-205ENST00000535375 FLNBO75369 2602 aaKnown RBP1.11□□□□□ -2.23
PRKDC-205ENST00000535375 MUC16Q8WXI7 14507 aa1.11□□□□□ -2.23
PRKDC-205ENST00000535375 ANKRD11Q6UB99 2663 aaPredicted RBP1.11□□□□□ -2.23
PRKDC-205ENST00000535375 TRBV6-7A0A0A0MS04 114 aa1.11□□□□□ -2.23
PRKDC-205ENST00000535375 TRBV6-4A0A1B0GX49 114 aa1.11□□□□□ -2.23
PRKDC-205ENST00000535375 A0A1W2PRE2 83 aa1.11□□□□□ -2.23
PRKDC-205ENST00000535375 K7ERJ3 54 aa1.11□□□□□ -2.23
PRKDC-205ENST00000535375 HIST1H2BKO60814 126 aa1.11□□□□□ -2.23
PRKDC-205ENST00000535375 HIST1H2BJP06899 126 aa1.11□□□□□ -2.23
PRKDC-205ENST00000535375 RAB5CP51148 216 aa1.11□□□□□ -2.23
PRKDC-205ENST00000535375 HBBP68871 147 aa1.11□□□□□ -2.23
PRKDC-205ENST00000535375 CDK6Q00534 326 aa1.11□□□□□ -2.23
PRKDC-205ENST00000535375 C2orf82Q6UX34 121 aa1.11□□□□□ -2.23
PRKDC-205ENST00000535375 Q8TAT8 98 aa1.11□□□□□ -2.23
PRKDC-205ENST00000535375 CHCHD1Q96BP2 118 aaKnown RBP1.11□□□□□ -2.23
PRKDC-205ENST00000535375 HYLS1Q96M11 299 aa1.11□□□□□ -2.23
PRKDC-205ENST00000535375 LINC00052Q96N35 136 aa1.11□□□□□ -2.23
PRKDC-205ENST00000535375 CEP192Q8TEP8 1941 aa1.11□□□□□ -2.23
PRKDC-205ENST00000535375 JMJD1CQ15652 2540 aa1.11□□□□□ -2.23
PRKDC-205ENST00000535375 PIEZO1Q92508 2521 aa1.11□□□□□ -2.23
PRKDC-205ENST00000535375 EML6Q6ZMW3 1958 aa1.1□□□□□ -2.23
PRKDC-205ENST00000535375 ADGBQ8N7X0 1667 aa1.1□□□□□ -2.23
PRKDC-205ENST00000535375 TECPR2O15040 1411 aa1.1□□□□□ -2.23
PRKDC-205ENST00000535375 H7BYZ3 331 aa1.1□□□□□ -2.23
PRKDC-205ENST00000535375 NUPR1O60356 82 aa1.1□□□□□ -2.23
PRKDC-205ENST00000535375 IFNA4P05014 189 aa1.1□□□□□ -2.23
PRKDC-205ENST00000535375 TFAMQ00059 246 aaKnown RBP1.1□□□□□ -2.23
PRKDC-205ENST00000535375 KLRD1Q13241 179 aa1.1□□□□□ -2.23
PRKDC-205ENST00000535375 GDF5OSQ5U4N7 250 aa1.1□□□□□ -2.23
PRKDC-205ENST00000535375 OR4K15Q8NH41 348 aa1.1□□□□□ -2.23
PRKDC-205ENST00000535375 RAB37Q96AX2 223 aa1.1□□□□□ -2.23
PRKDC-205ENST00000535375 MUCL1Q96DR8 90 aa1.1□□□□□ -2.23
PRKDC-205ENST00000535375 ZNF714Q96N38 554 aa1.1□□□□□ -2.23
PRKDC-205ENST00000535375 MRPL57Q9BQC6 102 aaKnown RBP1.1□□□□□ -2.23
PRKDC-205ENST00000535375 DDA1Q9BW61 102 aa1.1□□□□□ -2.23
PRKDC-205ENST00000535375 LRTM1Q9HBL6 345 aa1.1□□□□□ -2.23
PRKDC-205ENST00000535375 NOTCH1P46531 2555 aa1.1□□□□□ -2.23
PRKDC-205ENST00000535375 LAMB4A4D0S4 1761 aa1.1□□□□□ -2.23
PRKDC-205ENST00000535375 POLEQ07864 2286 aa1.1□□□□□ -2.23
PRKDC-205ENST00000535375 ZFHX4Q86UP3 3567 aa1.1□□□□□ -2.23
PRKDC-205ENST00000535375 RTL9Q8NET4 1388 aa1.09□□□□□ -2.23
PRKDC-205ENST00000535375 MYH3P11055 1940 aa1.09□□□□□ -2.23
PRKDC-205ENST00000535375 DOPEY1Q5JWR5 2465 aa1.09□□□□□ -2.23
PRKDC-205ENST00000535375 TRAV27A0A087WT01 109 aa1.09□□□□□ -2.23
PRKDC-205ENST00000535375 IGHV1-58A0A0C4DH39 117 aa1.09□□□□□ -2.23
PRKDC-205ENST00000535375 A0A1B0GV72 72 aa1.09□□□□□ -2.23
PRKDC-205ENST00000535375 TRDV1A0A1B0GX56 115 aa1.09□□□□□ -2.23
PRKDC-205ENST00000535375 M0R233 179 aa1.09□□□□□ -2.23
PRKDC-205ENST00000535375 RER1O15258 196 aa1.09□□□□□ -2.23
PRKDC-205ENST00000535375 CCL25O15444 150 aa1.09□□□□□ -2.23
PRKDC-205ENST00000535375 ERC2-IT1O76042 136 aa1.09□□□□□ -2.23
PRKDC-205ENST00000535375 IFT20Q8IY31 132 aa1.09□□□□□ -2.23
PRKDC-205ENST00000535375 DYDC1Q8WWB3 177 aa1.09□□□□□ -2.23
PRKDC-205ENST00000535375 ZC2HC1AQ96GY0 325 aa1.09□□□□□ -2.23
PRKDC-205ENST00000535375 TAS2R7Q9NYW3 318 aa1.09□□□□□ -2.23
PRKDC-205ENST00000535375 MED11Q9P086 117 aa1.09□□□□□ -2.23
PRKDC-205ENST00000535375 ORMDL1Q9P0S3 153 aa1.09□□□□□ -2.23
PRKDC-205ENST00000535375 C22orf24Q9Y442 160 aa1.09□□□□□ -2.23
PRKDC-205ENST00000535375 PBRM1Q86U86 1689 aa1.09□□□□□ -2.24
PRKDC-205ENST00000535375 DLG5Q8TDM6 1919 aa1.09□□□□□ -2.24
PRKDC-205ENST00000535375 TRAPPC8Q9Y2L5 1435 aa1.08□□□□□ -2.24
PRKDC-205ENST00000535375 NUP210LQ5VU65 1888 aa1.08□□□□□ -2.24
PRKDC-205ENST00000535375 H3BQV1 296 aa1.08□□□□□ -2.24
PRKDC-205ENST00000535375 CST7O76096 145 aa1.08□□□□□ -2.24
PRKDC-205ENST00000535375 CXCL8P10145 99 aa1.08□□□□□ -2.24
PRKDC-205ENST00000535375 ZNF25P17030 456 aaPredicted RBP1.08□□□□□ -2.24
PRKDC-205ENST00000535375 RPL35P42766 123 aaKnown RBP1.08□□□□□ -2.24
PRKDC-205ENST00000535375 TMEM14EPQ6UXP3 125 aa1.08□□□□□ -2.24
PRKDC-205ENST00000535375 ARPINQ7Z6K5 226 aa1.08□□□□□ -2.24
PRKDC-205ENST00000535375 SREK1IP1Q8N9Q2 155 aaPredicted RBP1.08□□□□□ -2.24
PRKDC-205ENST00000535375 ISOC1Q96CN7 298 aa1.08□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 101.5 ms