RNA–Protein interactions for RNA: ENST00000534885.5

TNFRSF1A-205, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best)

Gene TNFRSF1A, Length 2,069 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-205ENST00000534885 TUBA4BQ9H853 241 aa15.55■□□□□ 0.08
TNFRSF1A-205ENST00000534885 SMAD5-AS1Q9Y6J3 95 aa15.55■□□□□ 0.08
TNFRSF1A-205ENST00000534885 SLC17A3O00476 420 aa15.55■□□□□ 0.08
TNFRSF1A-205ENST00000534885 S100A7P31151 101 aa15.55■□□□□ 0.08
TNFRSF1A-205ENST00000534885 RPEL1Q2QD12 228 aa15.55■□□□□ 0.08
TNFRSF1A-205ENST00000534885 C11orf44Q8N8P7 122 aa15.55■□□□□ 0.08
TNFRSF1A-205ENST00000534885 HIST1H2BAQ96A08 127 aa15.55■□□□□ 0.08
TNFRSF1A-205ENST00000534885 C11orf52Q96A22 123 aa15.55■□□□□ 0.08
TNFRSF1A-205ENST00000534885 Q9H3A6 140 aa15.55■□□□□ 0.08
TNFRSF1A-205ENST00000534885 CDX1P47902 265 aaPredicted RBP15.54■□□□□ 0.08
TNFRSF1A-205ENST00000534885 DEFB136Q30KP8 78 aa15.54■□□□□ 0.08
TNFRSF1A-205ENST00000534885 RNF212Q495C1 297 aa15.54■□□□□ 0.08
TNFRSF1A-205ENST00000534885 RNF24Q9Y225 148 aa15.54■□□□□ 0.08
TNFRSF1A-205ENST00000534885 PGPA6NDG6 321 aa15.53■□□□□ 0.08
TNFRSF1A-205ENST00000534885 M0R036 132 aa15.53■□□□□ 0.08
TNFRSF1A-205ENST00000534885 TM4SF20Q53R12 229 aa15.53■□□□□ 0.08
TNFRSF1A-205ENST00000534885 GPHB5Q86YW7 130 aa15.53■□□□□ 0.08
TNFRSF1A-205ENST00000534885 HAX1O00165 279 aa15.53■□□□□ 0.08
TNFRSF1A-205ENST00000534885 NDUFA7O95182 113 aa15.53■□□□□ 0.08
TNFRSF1A-205ENST00000534885 MT-ND4LP03901 98 aa15.53■□□□□ 0.08
TNFRSF1A-205ENST00000534885 FAM106AQ4KMX7 169 aa15.53■□□□□ 0.08
TNFRSF1A-205ENST00000534885 EXOC3-AS1Q8N2X6 119 aa15.53■□□□□ 0.08
TNFRSF1A-205ENST00000534885 C2CD3Q4AC94 2353 aa15.53■□□□□ 0.08
TNFRSF1A-205ENST00000534885 C1orf196B1AJZ1 125 aa15.52■□□□□ 0.08
TNFRSF1A-205ENST00000534885 GNG5P63218 68 aa15.52■□□□□ 0.08
TNFRSF1A-205ENST00000534885 C12orf57Q99622 126 aa15.52■□□□□ 0.08
TNFRSF1A-205ENST00000534885 DAZ1Q9NQZ3 744 aaKnown RBP15.52■□□□□ 0.08
TNFRSF1A-205ENST00000534885 CD28P10747 220 aa15.52■□□□□ 0.07
TNFRSF1A-205ENST00000534885 EDN2P20800 178 aa15.52■□□□□ 0.07
TNFRSF1A-205ENST00000534885 C1orf194Q5T5A4 169 aa15.52■□□□□ 0.07
TNFRSF1A-205ENST00000534885 SIGLEC15Q6ZMC9 328 aa15.52■□□□□ 0.07
TNFRSF1A-205ENST00000534885 C4orf3Q8WVX3 66 aa15.52■□□□□ 0.07
TNFRSF1A-205ENST00000534885 NIPBLQ6KC79 2804 aaeCLIP15.51■□□□□ 0.07
TNFRSF1A-205ENST00000534885 TRBV20OR9-2A0A075B6H5 130 aa15.51■□□□□ 0.07
TNFRSF1A-205ENST00000534885 SLC25A5P05141 298 aaKnown RBP15.51■□□□□ 0.07
TNFRSF1A-205ENST00000534885 HOXD3P31249 432 aaPredicted RBP15.51■□□□□ 0.07
TNFRSF1A-205ENST00000534885 RHEBQ15382 184 aa15.51■□□□□ 0.07
TNFRSF1A-205ENST00000534885 KLHL30-AS1Q8NEE0 82 aa15.51■□□□□ 0.07
TNFRSF1A-205ENST00000534885 TVP23CQ96ET8 276 aa15.51■□□□□ 0.07
TNFRSF1A-205ENST00000534885 SDF2L1Q9HCN8 221 aa15.5■□□□□ 0.07
TNFRSF1A-205ENST00000534885 RNF114Q9Y508 228 aa15.5■□□□□ 0.07
TNFRSF1A-205ENST00000534885 PDE6HQ13956 83 aa15.5■□□□□ 0.07
TNFRSF1A-205ENST00000534885 C16orf54Q6UWD8 224 aa15.5■□□□□ 0.07
TNFRSF1A-205ENST00000534885 GLMPQ8WWB7 406 aa15.5■□□□□ 0.07
TNFRSF1A-205ENST00000534885 GPR82Q96P67 336 aa15.5■□□□□ 0.07
TNFRSF1A-205ENST00000534885 DUX3Q96PT4 197 aa15.5■□□□□ 0.07
TNFRSF1A-205ENST00000534885 OTORQ9NRC9 128 aa15.5■□□□□ 0.07
TNFRSF1A-205ENST00000534885 BTF3P20290 206 aaKnown RBP15.49■□□□□ 0.07
TNFRSF1A-205ENST00000534885 SYNJ2BPP57105 145 aa15.49■□□□□ 0.07
TNFRSF1A-205ENST00000534885 TMEM241Q24JQ0 296 aa15.49■□□□□ 0.07
TNFRSF1A-205ENST00000534885 LINC00479Q96M42 142 aa15.49■□□□□ 0.07
TNFRSF1A-205ENST00000534885 NAT8Q9UHE5 227 aa15.49■□□□□ 0.07
TNFRSF1A-205ENST00000534885 EPDR1Q9UM22 224 aa15.49■□□□□ 0.07
TNFRSF1A-205ENST00000534885 RPH3ALQ9UNE2 315 aa15.49■□□□□ 0.07
TNFRSF1A-205ENST00000534885 IGHV7-4-1A0A0J9YVY3 117 aa15.48■□□□□ 0.07
TNFRSF1A-205ENST00000534885 PGPEP1LA6NFU8 196 aa15.48■□□□□ 0.07
TNFRSF1A-205ENST00000534885 PEX7O00628 323 aa15.48■□□□□ 0.07
TNFRSF1A-205ENST00000534885 GALR1P47211 349 aa15.48■□□□□ 0.07
TNFRSF1A-205ENST00000534885 C5orf17Q8NAS9 161 aa15.48■□□□□ 0.07
TNFRSF1A-205ENST00000534885 OR11H1Q8NG94 326 aa15.48■□□□□ 0.07
TNFRSF1A-205ENST00000534885 ZNF785A8K8V0 405 aa15.48■□□□□ 0.07
TNFRSF1A-205ENST00000534885 PRB4P10163 310 aaPredicted RBP15.48■□□□□ 0.07
TNFRSF1A-205ENST00000534885 MEOX2P50222 304 aa15.48■□□□□ 0.07
TNFRSF1A-205ENST00000534885 PROK1P58294 105 aa15.48■□□□□ 0.07
TNFRSF1A-205ENST00000534885 SNRPEP62304 92 aaKnown RBP15.48■□□□□ 0.07
TNFRSF1A-205ENST00000534885 C8orf86Q6ZUL3 223 aa15.48■□□□□ 0.07
TNFRSF1A-205ENST00000534885 ISOC2Q96AB3 205 aa15.48■□□□□ 0.07
TNFRSF1A-205ENST00000534885 CITED2Q99967 270 aaPredicted RBP15.48■□□□□ 0.07
TNFRSF1A-205ENST00000534885 A0A1W2PRX2 142 aa15.47■□□□□ 0.07
TNFRSF1A-205ENST00000534885 TMEM213A2RRL7 107 aa15.47■□□□□ 0.07
TNFRSF1A-205ENST00000534885 K7EMT4 169 aa15.47■□□□□ 0.07
TNFRSF1A-205ENST00000534885 SLURP1P55000 103 aa15.47■□□□□ 0.07
TNFRSF1A-205ENST00000534885 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa15.47■□□□□ 0.07
TNFRSF1A-205ENST00000534885 LYPD1Q8N2G4 141 aa15.47■□□□□ 0.07
TNFRSF1A-205ENST00000534885 RHPN1-AS1Q9BWJ2 59 aa15.47■□□□□ 0.07
TNFRSF1A-205ENST00000534885 AURKAIP1Q9NWT8 199 aaPredicted RBP15.47■□□□□ 0.07
TNFRSF1A-205ENST00000534885 UFC1Q9Y3C8 167 aa15.47■□□□□ 0.07
TNFRSF1A-205ENST00000534885 SELENOKQ9Y6D0 94 aa15.47■□□□□ 0.07
TNFRSF1A-205ENST00000534885 A0A087X0K7 114 aa15.47■□□□□ 0.07
TNFRSF1A-205ENST00000534885 HELTA6NFD8 242 aa15.47■□□□□ 0.07
TNFRSF1A-205ENST00000534885 TEP1Q99973 2627 aaKnown RBP15.47■□□□□ 0.07
TNFRSF1A-205ENST00000534885 C5orf52A6NGY3 159 aa15.46■□□□□ 0.07
TNFRSF1A-205ENST00000534885 LINC01619G3V211 115 aa15.46■□□□□ 0.07
TNFRSF1A-205ENST00000534885 M0R3E3 92 aa15.46■□□□□ 0.07
TNFRSF1A-205ENST00000534885 RAB5AP20339 215 aa15.46■□□□□ 0.07
TNFRSF1A-205ENST00000534885 RPL23P62829 140 aaKnown RBP15.46■□□□□ 0.07
TNFRSF1A-205ENST00000534885 PNRC1Q12796 327 aaPredicted RBP15.46■□□□□ 0.07
TNFRSF1A-205ENST00000534885 ADIRFQ15847 76 aa15.46■□□□□ 0.07
TNFRSF1A-205ENST00000534885 IGFL4Q6B9Z1 124 aa15.46■□□□□ 0.07
TNFRSF1A-205ENST00000534885 REC114Q7Z4M0 266 aa15.46■□□□□ 0.07
TNFRSF1A-205ENST00000534885 TCEAL7Q9BRU2 100 aa15.46■□□□□ 0.07
TNFRSF1A-205ENST00000534885 SMPXQ9UHP9 88 aa15.46■□□□□ 0.07
TNFRSF1A-205ENST00000534885 JMJD1CQ15652 2540 aa15.45■□□□□ 0.06
TNFRSF1A-205ENST00000534885 TRAV34A0A0B4J273 112 aa15.45■□□□□ 0.06
TNFRSF1A-205ENST00000534885 A0A1W2PS18 150 aa15.45■□□□□ 0.06
TNFRSF1A-205ENST00000534885 CHEK1O14757 476 aa15.45■□□□□ 0.06
TNFRSF1A-205ENST00000534885 TCRAP04437 139 aa15.45■□□□□ 0.06
TNFRSF1A-205ENST00000534885 ATG101Q9BSB4 218 aa15.45■□□□□ 0.06
TNFRSF1A-205ENST00000534885 ZNF331Q9NQX6 463 aaPredicted RBP15.45■□□□□ 0.06
TNFRSF1A-205ENST00000534885 A8MWP6 167 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 94.6 ms