RNA–Protein interactions for RNA: ENST00000511421.5

SH3RF1-205, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 1 (best)

Gene SH3RF1, Length 1,657 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-205ENST00000511421 ZNF705BP0CI00 300 aaPredicted RBP8.37□□□□□ -1.07
SH3RF1-205ENST00000511421 CXCL3P19876 107 aa8.37□□□□□ -1.07
SH3RF1-205ENST00000511421 HLA-DMBP28068 263 aa8.37□□□□□ -1.07
SH3RF1-205ENST00000511421 RPL29P47914 159 aaKnown RBP8.37□□□□□ -1.07
SH3RF1-205ENST00000511421 CYCSP99999 105 aaKnown RBP8.37□□□□□ -1.07
SH3RF1-205ENST00000511421 NHLH2Q02577 135 aa8.37□□□□□ -1.07
SH3RF1-205ENST00000511421 BAXQ07812 192 aa8.37□□□□□ -1.07
SH3RF1-205ENST00000511421 OPCMLQ14982 345 aa8.37□□□□□ -1.07
SH3RF1-205ENST00000511421 LRRC37A5PQ49AS3 106 aa8.37□□□□□ -1.07
SH3RF1-205ENST00000511421 C10orf113Q5VZT2 155 aa8.37□□□□□ -1.07
SH3RF1-205ENST00000511421 NEU1Q99519 415 aa8.37□□□□□ -1.07
SH3RF1-205ENST00000511421 KLK5Q9Y337 293 aaPredicted RBP8.37□□□□□ -1.07
SH3RF1-205ENST00000511421 CNN1P51911 297 aaKnown RBP8.37□□□□□ -1.07
SH3RF1-205ENST00000511421 Q6ZRG5 221 aa8.37□□□□□ -1.07
SH3RF1-205ENST00000511421 PPP1R1CQ8WVI7 109 aa8.37□□□□□ -1.07
SH3RF1-205ENST00000511421 RNF126Q9BV68 326 aa8.37□□□□□ -1.07
SH3RF1-205ENST00000511421 SLC39A9Q9NUM3 307 aa8.37□□□□□ -1.07
SH3RF1-205ENST00000511421 SSNA1O43805 119 aa8.36□□□□□ -1.07
SH3RF1-205ENST00000511421 CXCL2P19875 107 aa8.36□□□□□ -1.07
SH3RF1-205ENST00000511421 FGF7P21781 194 aa8.36□□□□□ -1.07
SH3RF1-205ENST00000511421 B2MP61769 119 aa8.36□□□□□ -1.07
SH3RF1-205ENST00000511421 PSG3Q16557 428 aa8.36□□□□□ -1.07
SH3RF1-205ENST00000511421 BPIFA4PQ86YQ2 179 aa8.36□□□□□ -1.07
SH3RF1-205ENST00000511421 C1orf158Q8N1D5 194 aa8.36□□□□□ -1.07
SH3RF1-205ENST00000511421 ZNF738Q8NE65 137 aa8.36□□□□□ -1.07
SH3RF1-205ENST00000511421 OR5C1Q8NGR4 320 aa8.36□□□□□ -1.07
SH3RF1-205ENST00000511421 OR1L4Q8NGR5 311 aa8.36□□□□□ -1.07
SH3RF1-205ENST00000511421 LINC00476Q8WZB0 136 aa8.36□□□□□ -1.07
SH3RF1-205ENST00000511421 SLC25A31Q9H0C2 315 aa8.36□□□□□ -1.07
SH3RF1-205ENST00000511421 CELA1Q9UNI1 258 aa8.36□□□□□ -1.07
SH3RF1-205ENST00000511421 TRAV5A0A0B4J249 113 aa8.35□□□□□ -1.07
SH3RF1-205ENST00000511421 MPDU1O75352 247 aa8.35□□□□□ -1.07
SH3RF1-205ENST00000511421 DUSP14O95147 198 aaKnown RBP8.35□□□□□ -1.07
SH3RF1-205ENST00000511421 SNRPCP09234 159 aaKnown RBP8.35□□□□□ -1.07
SH3RF1-205ENST00000511421 IGLC2P0DOY2 106 aa8.35□□□□□ -1.07
SH3RF1-205ENST00000511421 LCN15Q6UWW0 184 aa8.35□□□□□ -1.07
SH3RF1-205ENST00000511421 OR11H7Q8NGC8 314 aa8.35□□□□□ -1.07
SH3RF1-205ENST00000511421 LRRC20Q8TCA0 184 aa8.35□□□□□ -1.07
SH3RF1-205ENST00000511421 ZNF331Q9NQX6 463 aaPredicted RBP8.35□□□□□ -1.07
SH3RF1-205ENST00000511421 PXMP4Q9Y6I8 212 aa8.35□□□□□ -1.07
SH3RF1-205ENST00000511421 hCG_2014768A0A024R1R8 64 aa8.34□□□□□ -1.07
SH3RF1-205ENST00000511421 IGHV3OR16-12A0A075B7B8 117 aa8.34□□□□□ -1.07
SH3RF1-205ENST00000511421 SMIM9A6NGZ8 99 aa8.34□□□□□ -1.07
SH3RF1-205ENST00000511421 H3BQ15 152 aa8.34□□□□□ -1.07
SH3RF1-205ENST00000511421 CRXO43186 299 aaPredicted RBP8.34□□□□□ -1.07
SH3RF1-205ENST00000511421 MPC2O95563 127 aa8.34□□□□□ -1.07
SH3RF1-205ENST00000511421 OR8A1Q8NGG7 326 aa8.34□□□□□ -1.07
SH3RF1-205ENST00000511421 SAT2Q96F10 170 aaPredicted RBP8.34□□□□□ -1.07
SH3RF1-205ENST00000511421 PFDN5Q99471 154 aa8.34□□□□□ -1.07
SH3RF1-205ENST00000511421 SLC50A1Q9BRV3 221 aa8.34□□□□□ -1.07
SH3RF1-205ENST00000511421 NPCDR1Q9BY65 106 aa8.34□□□□□ -1.07
SH3RF1-205ENST00000511421 H3BTX0 84 aa8.34□□□□□ -1.08
SH3RF1-205ENST00000511421 SLC17A3O00476 420 aa8.34□□□□□ -1.08
SH3RF1-205ENST00000511421 PRB4P10163 310 aaPredicted RBP8.34□□□□□ -1.08
SH3RF1-205ENST00000511421 CLINT1Q14677 625 aa8.34□□□□□ -1.08
SH3RF1-205ENST00000511421 Q6ZTC4 211 aa8.34□□□□□ -1.08
SH3RF1-205ENST00000511421 THAP6Q8TBB0 222 aa8.34□□□□□ -1.08
SH3RF1-205ENST00000511421 RPUSD4Q96CM3 377 aaKnown RBP8.34□□□□□ -1.08
SH3RF1-205ENST00000511421 IGF2BP2-AS1Q96M15 143 aa8.34□□□□□ -1.08
SH3RF1-205ENST00000511421 TMA7Q9Y2S6 64 aaKnown RBP8.34□□□□□ -1.08
SH3RF1-205ENST00000511421 GOLT1BQ9Y3E0 138 aa8.34□□□□□ -1.08
SH3RF1-205ENST00000511421 C11orf94C9JXX5 98 aa8.33□□□□□ -1.08
SH3RF1-205ENST00000511421 M0R2Z0 102 aa8.33□□□□□ -1.08
SH3RF1-205ENST00000511421 AMBPP02760 352 aa8.33□□□□□ -1.08
SH3RF1-205ENST00000511421 HIST1H1AQ02539 215 aaPredicted RBP8.33□□□□□ -1.08
SH3RF1-205ENST00000511421 SPINK13Q1W4C9 94 aa8.33□□□□□ -1.08
SH3RF1-205ENST00000511421 C12orf74Q32Q52 190 aa8.33□□□□□ -1.08
SH3RF1-205ENST00000511421 GCSAMLQ5JQS6 135 aa8.33□□□□□ -1.08
SH3RF1-205ENST00000511421 C2CD4CQ8TF44 421 aa8.33□□□□□ -1.08
SH3RF1-205ENST00000511421 RFNGQ9Y644 331 aa8.33□□□□□ -1.08
SH3RF1-205ENST00000511421 ALG5Q9Y673 324 aa8.33□□□□□ -1.08
SH3RF1-205ENST00000511421 KMT2AQ03164 3969 aa8.32□□□□□ -1.08
SH3RF1-205ENST00000511421 LY6G6CO95867 125 aa8.32□□□□□ -1.08
SH3RF1-205ENST00000511421 PTTG1O95997 202 aa8.32□□□□□ -1.08
SH3RF1-205ENST00000511421 WDR61Q9GZS3 305 aaKnown RBP8.32□□□□□ -1.08
SH3RF1-205ENST00000511421 ZNF586Q9NXT0 402 aa8.32□□□□□ -1.08
SH3RF1-205ENST00000511421 TMEM189A5PLL7 270 aa8.31□□□□□ -1.08
SH3RF1-205ENST00000511421 PRAC2D3DTV9 90 aa8.31□□□□□ -1.08
SH3RF1-205ENST00000511421 BOLA2-SMG1P6H3BVE0 249 aa8.31□□□□□ -1.08
SH3RF1-205ENST00000511421 HBE1P02100 147 aa8.31□□□□□ -1.08
SH3RF1-205ENST00000511421 PET100P0DJ07 73 aa8.31□□□□□ -1.08
SH3RF1-205ENST00000511421 GUK1Q16774 197 aa8.31□□□□□ -1.08
SH3RF1-205ENST00000511421 ZNF767PQ75MW2 155 aa8.31□□□□□ -1.08
SH3RF1-205ENST00000511421 TMEM14CQ9P0S9 112 aa8.31□□□□□ -1.08
SH3RF1-205ENST00000511421 MBD2Q9UBB5 411 aa8.31□□□□□ -1.08
SH3RF1-205ENST00000511421 HSPB11Q9Y547 144 aa8.31□□□□□ -1.08
SH3RF1-205ENST00000511421 VPS13DQ5THJ4 4388 aa8.31□□□□□ -1.08
SH3RF1-205ENST00000511421 TRAV10A0A0B4J240 114 aa8.3□□□□□ -1.08
SH3RF1-205ENST00000511421 RPL12P30050 165 aaKnown RBP8.3□□□□□ -1.08
SH3RF1-205ENST00000511421 EMP1P54849 157 aa8.3□□□□□ -1.08
SH3RF1-205ENST00000511421 RHOBP62745 196 aa8.3□□□□□ -1.08
SH3RF1-205ENST00000511421 BAP18Q8IXM2 172 aa8.3□□□□□ -1.08
SH3RF1-205ENST00000511421 ATP5SQ99766 215 aa8.3□□□□□ -1.08
SH3RF1-205ENST00000511421 APLNQ9ULZ1 77 aa8.3□□□□□ -1.08
SH3RF1-205ENST00000511421 TRBV19A0A075B6N1 114 aa8.3□□□□□ -1.08
SH3RF1-205ENST00000511421 TRAV12-2A0A075B6T6 113 aa8.3□□□□□ -1.08
SH3RF1-205ENST00000511421 LOC102723971A0A1B0GUV8 181 aa8.3□□□□□ -1.08
SH3RF1-205ENST00000511421 IGLL5B9A064 214 aa8.3□□□□□ -1.08
SH3RF1-205ENST00000511421 ZNF253O75346 499 aa8.3□□□□□ -1.08
SH3RF1-205ENST00000511421 NDUFB4O95168 129 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms