RNA–Protein interactions for RNA: ENST00000495619.1

NCKAP1-208, Transcript of NCK associated protein 1, humanhuman

TSL 3

Gene NCKAP1, Length 665 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1-208ENST00000495619 AQP4P55087 323 aa2.1□□□□□ -2.07
NCKAP1-208ENST00000495619 ARPP19P56211 112 aa2.1□□□□□ -2.07
NCKAP1-208ENST00000495619 HIST1H2BDP58876 126 aa2.1□□□□□ -2.07
NCKAP1-208ENST00000495619 HIST1H2BCP62807 126 aa2.1□□□□□ -2.07
NCKAP1-208ENST00000495619 QRFPP83859 136 aa2.1□□□□□ -2.07
NCKAP1-208ENST00000495619 ZNF90Q03938 601 aa2.1□□□□□ -2.07
NCKAP1-208ENST00000495619 HIST2H2BEQ16778 126 aa2.1□□□□□ -2.07
NCKAP1-208ENST00000495619 PYDC2Q56P42 97 aa2.1□□□□□ -2.07
NCKAP1-208ENST00000495619 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.1□□□□□ -2.07
NCKAP1-208ENST00000495619 C9orf153Q5TBE3 101 aa2.1□□□□□ -2.07
NCKAP1-208ENST00000495619 Q6AWC8 147 aa2.1□□□□□ -2.07
NCKAP1-208ENST00000495619 KCNRGQ8N5I3 272 aa2.1□□□□□ -2.07
NCKAP1-208ENST00000495619 LINC00311Q8N616 119 aa2.1□□□□□ -2.07
NCKAP1-208ENST00000495619 WFDC11Q8NEX6 87 aa2.1□□□□□ -2.07
NCKAP1-208ENST00000495619 OR4B1Q8NGF8 309 aa2.1□□□□□ -2.07
NCKAP1-208ENST00000495619 OR5H2Q8NGV7 314 aa2.1□□□□□ -2.07
NCKAP1-208ENST00000495619 STAG3L4Q8TBR4 150 aa2.1□□□□□ -2.07
NCKAP1-208ENST00000495619 HIST1H2BHQ93079 126 aa2.1□□□□□ -2.07
NCKAP1-208ENST00000495619 HYLS1Q96M11 299 aa2.1□□□□□ -2.07
NCKAP1-208ENST00000495619 HIST1H2BNQ99877 126 aa2.1□□□□□ -2.07
NCKAP1-208ENST00000495619 HIST1H2BMQ99879 126 aa2.1□□□□□ -2.07
NCKAP1-208ENST00000495619 NAA60Q9H7X0 242 aa2.1□□□□□ -2.07
NCKAP1-208ENST00000495619 SMCO4Q9NRQ5 59 aa2.1□□□□□ -2.07
NCKAP1-208ENST00000495619 ASF1BQ9NVP2 202 aa2.1□□□□□ -2.07
NCKAP1-208ENST00000495619 TAC3Q9UHF0 121 aa2.1□□□□□ -2.07
NCKAP1-208ENST00000495619 MAPKBP1O60336 1514 aa2.1□□□□□ -2.07
NCKAP1-208ENST00000495619 CITO14578 2027 aa2.1□□□□□ -2.07
NCKAP1-208ENST00000495619 CUL7Q14999 1698 aa2.09□□□□□ -2.07
NCKAP1-208ENST00000495619 ATG2AQ2TAZ0 1938 aa2.09□□□□□ -2.07
NCKAP1-208ENST00000495619 CCDC88BA6NC98 1476 aa2.09□□□□□ -2.07
NCKAP1-208ENST00000495619 FANCAO15360 1455 aa2.09□□□□□ -2.07
NCKAP1-208ENST00000495619 IGHV1-45A0A0A0MS14 117 aa2.09□□□□□ -2.07
NCKAP1-208ENST00000495619 OR51F1A6NGY5 319 aa2.09□□□□□ -2.07
NCKAP1-208ENST00000495619 G3V3Q6 166 aa2.09□□□□□ -2.07
NCKAP1-208ENST00000495619 TMEM256-PLSCR3K7ERE1 68 aa2.09□□□□□ -2.07
NCKAP1-208ENST00000495619 UQCRQO14949 82 aa2.09□□□□□ -2.07
NCKAP1-208ENST00000495619 LTAP01374 205 aa2.09□□□□□ -2.07
NCKAP1-208ENST00000495619 CXCL1P09341 107 aa2.09□□□□□ -2.07
NCKAP1-208ENST00000495619 SEC11BP0C7V7 166 aa2.09□□□□□ -2.07
NCKAP1-208ENST00000495619 HLA-DRB4P13762 266 aa2.09□□□□□ -2.07
NCKAP1-208ENST00000495619 S100A4P26447 101 aaKnown RBP2.09□□□□□ -2.07
NCKAP1-208ENST00000495619 SRP14P37108 136 aaKnown RBP2.09□□□□□ -2.07
NCKAP1-208ENST00000495619 HBBP68871 147 aa2.09□□□□□ -2.07
NCKAP1-208ENST00000495619 AKR1C1Q04828 323 aa2.09□□□□□ -2.07
NCKAP1-208ENST00000495619 LAIR2Q6ISS4 152 aa2.09□□□□□ -2.07
NCKAP1-208ENST00000495619 ALKAL2Q6UX46 152 aa2.09□□□□□ -2.07
NCKAP1-208ENST00000495619 Q6ZUT4 128 aa2.09□□□□□ -2.07
NCKAP1-208ENST00000495619 SCXQ7RTU7 201 aa2.09□□□□□ -2.07
NCKAP1-208ENST00000495619 AAED1Q7RTV5 226 aa2.09□□□□□ -2.07
NCKAP1-208ENST00000495619 GPHB5Q86YW7 130 aa2.09□□□□□ -2.07
NCKAP1-208ENST00000495619 ZNF555Q8NEP9 628 aa2.09□□□□□ -2.07
NCKAP1-208ENST00000495619 BPIFB6Q8NFQ5 453 aa2.09□□□□□ -2.07
NCKAP1-208ENST00000495619 OR4X2Q8NGF9 303 aa2.09□□□□□ -2.07
NCKAP1-208ENST00000495619 OR5D16Q8NGK9 328 aa2.09□□□□□ -2.07
NCKAP1-208ENST00000495619 OR5AK2Q8NH90 309 aa2.09□□□□□ -2.07
NCKAP1-208ENST00000495619 C2orf15Q8WU43 125 aaKnown RBP2.09□□□□□ -2.07
NCKAP1-208ENST00000495619 COPS9Q8WXC6 57 aa2.09□□□□□ -2.07
NCKAP1-208ENST00000495619 SEC11CQ9BY50 192 aa2.09□□□□□ -2.07
NCKAP1-208ENST00000495619 MRPS16Q9Y3D3 137 aaKnown RBP2.09□□□□□ -2.07
NCKAP1-208ENST00000495619 CHCHD2Q9Y6H1 151 aaPredicted RBP2.09□□□□□ -2.07
NCKAP1-208ENST00000495619 HLA-DRB4X5D2U9 266 aa2.09□□□□□ -2.07
NCKAP1-208ENST00000495619 ADGBQ8N7X0 1667 aa2.09□□□□□ -2.08
NCKAP1-208ENST00000495619 KDM6AO15550 1401 aaPredicted RBP2.08□□□□□ -2.08
NCKAP1-208ENST00000495619 ADAMTS12P58397 1594 aa2.08□□□□□ -2.08
NCKAP1-208ENST00000495619 NRKQ7Z2Y5 1582 aa2.08□□□□□ -2.08
NCKAP1-208ENST00000495619 TRAV12-2A0A075B6T6 113 aa2.08□□□□□ -2.08
NCKAP1-208ENST00000495619 TRBV27A0A0K0K1C4 114 aa2.08□□□□□ -2.08
NCKAP1-208ENST00000495619 C3orf85A0A1B0GTC6 90 aa2.08□□□□□ -2.08
NCKAP1-208ENST00000495619 TMEM262E9PQX1 116 aa2.08□□□□□ -2.08
NCKAP1-208ENST00000495619 H3BQ15 152 aa2.08□□□□□ -2.08
NCKAP1-208ENST00000495619 IGKV1-5P01602 117 aa2.08□□□□□ -2.08
NCKAP1-208ENST00000495619 TRACP01848 142 aa2.08□□□□□ -2.08
NCKAP1-208ENST00000495619 SLC25A5P05141 298 aaKnown RBP2.08□□□□□ -2.08
NCKAP1-208ENST00000495619 UBE2BP63146 152 aa2.08□□□□□ -2.08
NCKAP1-208ENST00000495619 CCL20P78556 96 aa2.08□□□□□ -2.08
NCKAP1-208ENST00000495619 Q56UQ5 140 aa2.08□□□□□ -2.08
NCKAP1-208ENST00000495619 KHDC3LQ587J8 217 aa2.08□□□□□ -2.08
NCKAP1-208ENST00000495619 AADACL3Q5VUY0 350 aa2.08□□□□□ -2.08
NCKAP1-208ENST00000495619 ATOH7Q8N100 152 aa2.08□□□□□ -2.08
NCKAP1-208ENST00000495619 HIST3H2BBQ8N257 126 aa2.08□□□□□ -2.08
NCKAP1-208ENST00000495619 OR10P1Q8NGE3 313 aa2.08□□□□□ -2.08
NCKAP1-208ENST00000495619 RAB37Q96AX2 223 aa2.08□□□□□ -2.08
NCKAP1-208ENST00000495619 LINC00526Q96FQ7 95 aa2.08□□□□□ -2.08
NCKAP1-208ENST00000495619 AQP10Q96PS8 301 aa2.08□□□□□ -2.08
NCKAP1-208ENST00000495619 AGPAT4-IT1Q9H0P7 198 aa2.08□□□□□ -2.08
NCKAP1-208ENST00000495619 TMEM106BQ9NUM4 274 aa2.08□□□□□ -2.08
NCKAP1-208ENST00000495619 CACNA1GO43497 2377 aa2.08□□□□□ -2.08
NCKAP1-208ENST00000495619 CASZ1Q86V15 1759 aa2.08□□□□□ -2.08
NCKAP1-208ENST00000495619 FER1L6Q2WGJ9 1857 aa2.07□□□□□ -2.08
NCKAP1-208ENST00000495619 IGKV1OR2-108A0A075B7D4 117 aa2.07□□□□□ -2.08
NCKAP1-208ENST00000495619 C9JCJ5 164 aa2.07□□□□□ -2.08
NCKAP1-208ENST00000495619 H3BQ85 93 aa2.07□□□□□ -2.08
NCKAP1-208ENST00000495619 BUB1B-PAK6H3BSN5 160 aa2.07□□□□□ -2.08
NCKAP1-208ENST00000495619 APOC4-APOC2K7ER74 178 aa2.07□□□□□ -2.08
NCKAP1-208ENST00000495619 NDUFB2O95178 105 aa2.07□□□□□ -2.08
NCKAP1-208ENST00000495619 APOC2P02655 101 aa2.07□□□□□ -2.08
NCKAP1-208ENST00000495619 PRM2P04554 102 aa2.07□□□□□ -2.08
NCKAP1-208ENST00000495619 CD7P09564 240 aa2.07□□□□□ -2.08
NCKAP1-208ENST00000495619 DYNLT3P51808 116 aa2.07□□□□□ -2.08
NCKAP1-208ENST00000495619 SNRPD3P62318 126 aaKnown RBP2.07□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms