RNA–Protein interactions for RNA: ENST00000493648.1

TOP3A-207, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 503 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-207ENST00000493648 CLEC5AQ9NY25 188 aa5.08□□□□□ -1.6
TOP3A-207ENST00000493648 XCL2Q9UBD3 114 aa5.08□□□□□ -1.6
TOP3A-207ENST00000493648 ALG5Q9Y673 324 aa5.08□□□□□ -1.6
TOP3A-207ENST00000493648 PXMP4Q9Y6I8 212 aa5.08□□□□□ -1.6
TOP3A-207ENST00000493648 TRAV8-2A0A0B4J237 113 aa5.07□□□□□ -1.6
TOP3A-207ENST00000493648 NUPR2A6NF83 97 aa5.07□□□□□ -1.6
TOP3A-207ENST00000493648 ZNF705EA8MWA4 302 aaPredicted RBP5.07□□□□□ -1.6
TOP3A-207ENST00000493648 F6UB75 175 aa5.07□□□□□ -1.6
TOP3A-207ENST00000493648 MRPS12O15235 138 aaKnown RBP5.07□□□□□ -1.6
TOP3A-207ENST00000493648 IFNA5P01569 189 aa5.07□□□□□ -1.6
TOP3A-207ENST00000493648 AMBPP02760 352 aa5.07□□□□□ -1.6
TOP3A-207ENST00000493648 CXCL3P19876 107 aa5.07□□□□□ -1.6
TOP3A-207ENST00000493648 RPL12P30050 165 aaKnown RBP5.07□□□□□ -1.6
TOP3A-207ENST00000493648 FXYD7P58549 80 aa5.07□□□□□ -1.6
TOP3A-207ENST00000493648 PMS2P11Q13670 270 aa5.07□□□□□ -1.6
TOP3A-207ENST00000493648 CLINT1Q14677 625 aa5.07□□□□□ -1.6
TOP3A-207ENST00000493648 OXA1LQ15070 435 aa5.07□□□□□ -1.6
TOP3A-207ENST00000493648 GUK1Q16774 197 aa5.07□□□□□ -1.6
TOP3A-207ENST00000493648 IGFL4Q6B9Z1 124 aa5.07□□□□□ -1.6
TOP3A-207ENST00000493648 LCN15Q6UWW0 184 aa5.07□□□□□ -1.6
TOP3A-207ENST00000493648 RNF182Q8N6D2 247 aa5.07□□□□□ -1.6
TOP3A-207ENST00000493648 SCGB1C1Q8TD33 95 aa5.07□□□□□ -1.6
TOP3A-207ENST00000493648 ATP5SQ99766 215 aa5.07□□□□□ -1.6
TOP3A-207ENST00000493648 SLC50A1Q9BRV3 221 aa5.07□□□□□ -1.6
TOP3A-207ENST00000493648 NPCDR1Q9BY65 106 aa5.07□□□□□ -1.6
TOP3A-207ENST00000493648 WDR61Q9GZS3 305 aaKnown RBP5.07□□□□□ -1.6
TOP3A-207ENST00000493648 HRH4Q9H3N8 390 aa5.07□□□□□ -1.6
TOP3A-207ENST00000493648 KCNIP2Q9NS61 270 aa5.07□□□□□ -1.6
TOP3A-207ENST00000493648 PPP1R14DQ9NXH3 145 aa5.07□□□□□ -1.6
TOP3A-207ENST00000493648 KLK5Q9Y337 293 aaPredicted RBP5.07□□□□□ -1.6
TOP3A-207ENST00000493648 GOLT1BQ9Y3E0 138 aa5.07□□□□□ -1.6
TOP3A-207ENST00000493648 TRAV5A0A0B4J249 113 aa5.06□□□□□ -1.6
TOP3A-207ENST00000493648 IGHV4-28A0A0C4DH34 117 aa5.06□□□□□ -1.6
TOP3A-207ENST00000493648 SMIM9A6NGZ8 99 aa5.06□□□□□ -1.6
TOP3A-207ENST00000493648 DEFB4AO15263 64 aa5.06□□□□□ -1.6
TOP3A-207ENST00000493648 JTBO76095 146 aa5.06□□□□□ -1.6
TOP3A-207ENST00000493648 CNN1P51911 297 aaKnown RBP5.06□□□□□ -1.6
TOP3A-207ENST00000493648 RHOBP62745 196 aa5.06□□□□□ -1.6
TOP3A-207ENST00000493648 MORN5Q5VZ52 161 aa5.06□□□□□ -1.6
TOP3A-207ENST00000493648 CEMP1Q6PRD7 247 aaPredicted RBP5.06□□□□□ -1.6
TOP3A-207ENST00000493648 Q8NAQ8 132 aa5.06□□□□□ -1.6
TOP3A-207ENST00000493648 PHLDA1Q8WV24 401 aaPredicted RBP5.06□□□□□ -1.6
TOP3A-207ENST00000493648 RPUSD4Q96CM3 377 aaKnown RBP5.06□□□□□ -1.6
TOP3A-207ENST00000493648 NEU1Q99519 415 aa5.06□□□□□ -1.6
TOP3A-207ENST00000493648 SLC35B3Q9H1N7 401 aa5.06□□□□□ -1.6
TOP3A-207ENST00000493648 ZNF331Q9NQX6 463 aaPredicted RBP5.06□□□□□ -1.6
TOP3A-207ENST00000493648 TMEM14CQ9P0S9 112 aa5.06□□□□□ -1.6
TOP3A-207ENST00000493648 MBD2Q9UBB5 411 aa5.06□□□□□ -1.6
TOP3A-207ENST00000493648 HSPB11Q9Y547 144 aa5.06□□□□□ -1.6
TOP3A-207ENST00000493648 X6R8D5 127 aa5.06□□□□□ -1.6
TOP3A-207ENST00000493648 IGHV3OR16-12A0A075B7B8 117 aa5.05□□□□□ -1.6
TOP3A-207ENST00000493648 LCE6AA0A183 80 aa5.05□□□□□ -1.6
TOP3A-207ENST00000493648 TMEM189A5PLL7 270 aa5.05□□□□□ -1.6
TOP3A-207ENST00000493648 A8MTW9 85 aa5.05□□□□□ -1.6
TOP3A-207ENST00000493648 H3BQ15 152 aa5.05□□□□□ -1.6
TOP3A-207ENST00000493648 HBE1P02100 147 aa5.05□□□□□ -1.6
TOP3A-207ENST00000493648 SNRPCP09234 159 aaKnown RBP5.05□□□□□ -1.6
TOP3A-207ENST00000493648 ZNF705DP0CH99 300 aaPredicted RBP5.05□□□□□ -1.6
TOP3A-207ENST00000493648 ZNF705BP0CI00 300 aaPredicted RBP5.05□□□□□ -1.6
TOP3A-207ENST00000493648 RBMY1A1P0DJD3 496 aaKnown RBP5.05□□□□□ -1.6
TOP3A-207ENST00000493648 RBMY1CP0DJD4 496 aa5.05□□□□□ -1.6
TOP3A-207ENST00000493648 IGLC2P0DOY2 106 aa5.05□□□□□ -1.6
TOP3A-207ENST00000493648 HLA-DMBP28068 263 aa5.05□□□□□ -1.6
TOP3A-207ENST00000493648 NANOS2P60321 138 aaKnown RBP5.05□□□□□ -1.6
TOP3A-207ENST00000493648 HIST1H1AQ02539 215 aaPredicted RBP5.05□□□□□ -1.6
TOP3A-207ENST00000493648 RBMY1FQ15415 496 aaKnown RBP5.05□□□□□ -1.6
TOP3A-207ENST00000493648 FCN2Q15485 313 aa5.05□□□□□ -1.6
TOP3A-207ENST00000493648 ZNF705AQ6ZN79 300 aaPredicted RBP5.05□□□□□ -1.6
TOP3A-207ENST00000493648 OR8A1Q8NGG7 326 aa5.05□□□□□ -1.6
TOP3A-207ENST00000493648 ASB13Q8WXK3 278 aa5.05□□□□□ -1.6
TOP3A-207ENST00000493648 IGF2BP2-AS1Q96M15 143 aa5.05□□□□□ -1.6
TOP3A-207ENST00000493648 TMEM208Q9BTX3 173 aa5.05□□□□□ -1.6
TOP3A-207ENST00000493648 SMIM3Q9BZL3 60 aa5.05□□□□□ -1.6
TOP3A-207ENST00000493648 TIMM9Q9Y5J7 89 aa5.05□□□□□ -1.6
TOP3A-207ENST00000493648 TRBV19A0A075B6N1 114 aa5.04□□□□□ -1.6
TOP3A-207ENST00000493648 ZNF705FA8MVS1 300 aaPredicted RBP5.04□□□□□ -1.6
TOP3A-207ENST00000493648 C11orf94C9JXX5 98 aa5.04□□□□□ -1.6
TOP3A-207ENST00000493648 H3BTX0 84 aa5.04□□□□□ -1.6
TOP3A-207ENST00000493648 ZNF253O75346 499 aa5.04□□□□□ -1.6
TOP3A-207ENST00000493648 INSP01308 110 aa5.04□□□□□ -1.6
TOP3A-207ENST00000493648 SPART-AS1P0CW21 52 aa5.04□□□□□ -1.6
TOP3A-207ENST00000493648 HIST1H1EP10412 219 aaKnown RBP5.04□□□□□ -1.6
TOP3A-207ENST00000493648 SPINK13Q1W4C9 94 aa5.04□□□□□ -1.6
TOP3A-207ENST00000493648 GCSAMLQ5JQS6 135 aa5.04□□□□□ -1.6
TOP3A-207ENST00000493648 AMTNQ6UX39 209 aa5.04□□□□□ -1.6
TOP3A-207ENST00000493648 Q6ZNX1 250 aa5.04□□□□□ -1.6
TOP3A-207ENST00000493648 OR11H7Q8NGC8 314 aa5.04□□□□□ -1.6
TOP3A-207ENST00000493648 OR10J6PQ8NGY7 276 aa5.04□□□□□ -1.6
TOP3A-207ENST00000493648 SAT2Q96F10 170 aaPredicted RBP5.04□□□□□ -1.6
TOP3A-207ENST00000493648 MRPL32Q9BYC8 188 aaKnown RBP5.04□□□□□ -1.6
TOP3A-207ENST00000493648 PARD6GQ9BYG4 376 aaPredicted RBP5.04□□□□□ -1.6
TOP3A-207ENST00000493648 ZNF586Q9NXT0 402 aa5.04□□□□□ -1.6
TOP3A-207ENST00000493648 PRELID1Q9Y255 219 aa5.04□□□□□ -1.6
TOP3A-207ENST00000493648 RFNGQ9Y644 331 aa5.04□□□□□ -1.6
TOP3A-207ENST00000493648 DNAH7Q8WXX0 4024 aa5.04□□□□□ -1.6
TOP3A-207ENST00000493648 BOLA2-SMG1P6H3BVE0 249 aa5.03□□□□□ -1.6
TOP3A-207ENST00000493648 M0R2Z0 102 aa5.03□□□□□ -1.6
TOP3A-207ENST00000493648 SLC17A3O00476 420 aa5.03□□□□□ -1.6
TOP3A-207ENST00000493648 GIPP09681 153 aaPredicted RBP5.03□□□□□ -1.6
TOP3A-207ENST00000493648 NBEAP1P0C6P0 100 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms