RNA–Protein interactions for RNA: ENST00000491028.1

MCF2L-230, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 4

Gene MCF2L, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-230ENST00000491028 NBEAP1P0C6P0 100 aa14□□□□□ -0.17
MCF2L-230ENST00000491028 FGF8P55075 233 aaPredicted RBP14□□□□□ -0.17
MCF2L-230ENST00000491028 SUN5Q8TC36 379 aa14□□□□□ -0.17
MCF2L-230ENST00000491028 ZNF586Q9NXT0 402 aa14□□□□□ -0.17
MCF2L-230ENST00000491028 IGKV3-7A0A075B6H7 116 aa13.99□□□□□ -0.17
MCF2L-230ENST00000491028 TRBV19A0A075B6N1 114 aa13.99□□□□□ -0.17
MCF2L-230ENST00000491028 IZUMO1RA6ND01 250 aa13.99□□□□□ -0.17
MCF2L-230ENST00000491028 OR4C46A6NHA9 309 aa13.99□□□□□ -0.17
MCF2L-230ENST00000491028 H3BQ15 152 aa13.99□□□□□ -0.17
MCF2L-230ENST00000491028 DNASE2O00115 360 aaPredicted RBP13.99□□□□□ -0.17
MCF2L-230ENST00000491028 PSMB3P49720 205 aa13.99□□□□□ -0.17
MCF2L-230ENST00000491028 IQCF2Q8IXL9 164 aa13.99□□□□□ -0.17
MCF2L-230ENST00000491028 DCANP1Q8TF63 244 aa13.99□□□□□ -0.17
MCF2L-230ENST00000491028 C17orf77Q96MU5 243 aa13.99□□□□□ -0.17
MCF2L-230ENST00000491028 SLC50A1Q9BRV3 221 aa13.99□□□□□ -0.17
MCF2L-230ENST00000491028 K7EQG2 157 aa13.98□□□□□ -0.17
MCF2L-230ENST00000491028 GBGT1Q8N5D6 347 aa13.98□□□□□ -0.17
MCF2L-230ENST00000491028 ZMAT5Q9UDW3 170 aaKnown RBP13.98□□□□□ -0.17
MCF2L-230ENST00000491028 ISLRO14498 428 aa13.97□□□□□ -0.17
MCF2L-230ENST00000491028 SOCS3O14543 225 aa13.97□□□□□ -0.17
MCF2L-230ENST00000491028 PPT1P50897 306 aa13.97□□□□□ -0.17
MCF2L-230ENST00000491028 GUCA2BQ16661 112 aa13.97□□□□□ -0.17
MCF2L-230ENST00000491028 LYPD6BQ8NI32 183 aa13.97□□□□□ -0.17
MCF2L-230ENST00000491028 BLNKQ8WV28 456 aa13.97□□□□□ -0.17
MCF2L-230ENST00000491028 ZNF331Q9NQX6 463 aaPredicted RBP13.97□□□□□ -0.17
MCF2L-230ENST00000491028 CLEC5AQ9NY25 188 aa13.97□□□□□ -0.17
MCF2L-230ENST00000491028 ARL2-SNX15V9GYD0 113 aa13.97□□□□□ -0.17
MCF2L-230ENST00000491028 RGS13O14921 159 aa13.96□□□□□ -0.17
MCF2L-230ENST00000491028 ID1P41134 155 aa13.96□□□□□ -0.17
MCF2L-230ENST00000491028 TFPI2P48307 235 aa13.96□□□□□ -0.17
MCF2L-230ENST00000491028 RAB14P61106 215 aa13.96□□□□□ -0.17
MCF2L-230ENST00000491028 PSG9Q00887 426 aa13.96□□□□□ -0.17
MCF2L-230ENST00000491028 OXLD1Q5BKU9 147 aa13.96□□□□□ -0.17
MCF2L-230ENST00000491028 LYPD1Q8N2G4 141 aa13.96□□□□□ -0.17
MCF2L-230ENST00000491028 C16orf92Q96LL3 132 aa13.96□□□□□ -0.17
MCF2L-230ENST00000491028 TMPRSS5Q9H3S3 457 aa13.96□□□□□ -0.17
MCF2L-230ENST00000491028 ZNF256Q9Y2P7 627 aaPredicted RBP13.96□□□□□ -0.17
MCF2L-230ENST00000491028 TRRAPQ9Y4A5 3859 aa13.96□□□□□ -0.18
MCF2L-230ENST00000491028 A0A1B0GV50 99 aa13.95□□□□□ -0.18
MCF2L-230ENST00000491028 H3BTX0 84 aa13.95□□□□□ -0.18
MCF2L-230ENST00000491028 SLC17A3O00476 420 aa13.95□□□□□ -0.18
MCF2L-230ENST00000491028 NDUFB4O95168 129 aa13.95□□□□□ -0.18
MCF2L-230ENST00000491028 NMBP08949 121 aa13.95□□□□□ -0.18
MCF2L-230ENST00000491028 SNRPCP09234 159 aaKnown RBP13.95□□□□□ -0.18
MCF2L-230ENST00000491028 BEAN1Q3B7T3 259 aa13.95□□□□□ -0.18
MCF2L-230ENST00000491028 SAMD5Q5TGI4 173 aa13.95□□□□□ -0.18
MCF2L-230ENST00000491028 WFDC3Q8IUB2 231 aa13.95□□□□□ -0.18
MCF2L-230ENST00000491028 SNRPD3P62318 126 aaKnown RBP13.94□□□□□ -0.18
MCF2L-230ENST00000491028 EGFEM1PQ0D2K5 195 aa13.94□□□□□ -0.18
MCF2L-230ENST00000491028 PMS2P11Q13670 270 aa13.94□□□□□ -0.18
MCF2L-230ENST00000491028 AAMDCQ9H7C9 122 aa13.94□□□□□ -0.18
MCF2L-230ENST00000491028 TRAV8-2A0A0B4J237 113 aa13.93□□□□□ -0.18
MCF2L-230ENST00000491028 A0A1W2PRE2 83 aa13.93□□□□□ -0.18
MCF2L-230ENST00000491028 IFNA1P01562 189 aa13.93□□□□□ -0.18
MCF2L-230ENST00000491028 CMC4P56277 68 aaPredicted RBP13.93□□□□□ -0.18
MCF2L-230ENST00000491028 CLLU1Q5K131 121 aa13.93□□□□□ -0.18
MCF2L-230ENST00000491028 FAM110AQ9BQ89 295 aa13.93□□□□□ -0.18
MCF2L-230ENST00000491028 MANBALQ9NQG1 85 aa13.93□□□□□ -0.18
MCF2L-230ENST00000491028 PRELID1Q9Y255 219 aa13.93□□□□□ -0.18
MCF2L-230ENST00000491028 RANP62826 216 aaKnown RBP13.92□□□□□ -0.18
MCF2L-230ENST00000491028 CCL20P78556 96 aa13.92□□□□□ -0.18
MCF2L-230ENST00000491028 MRPL53Q96EL3 112 aaKnown RBP13.92□□□□□ -0.18
MCF2L-230ENST00000491028 NKX6-2Q9C056 277 aaPredicted RBP13.92□□□□□ -0.18
MCF2L-230ENST00000491028 Q9H3A6 140 aa13.92□□□□□ -0.18
MCF2L-230ENST00000491028 OTORQ9NRC9 128 aa13.92□□□□□ -0.18
MCF2L-230ENST00000491028 FAM74A7A6NL05 159 aa13.91□□□□□ -0.18
MCF2L-230ENST00000491028 G3V4G9 280 aa13.91□□□□□ -0.18
MCF2L-230ENST00000491028 ZNF688P0C7X2 276 aa13.91□□□□□ -0.18
MCF2L-230ENST00000491028 TAGLN2P37802 199 aaKnown RBP13.91□□□□□ -0.18
MCF2L-230ENST00000491028 FAM24BQ8N5W8 94 aa13.91□□□□□ -0.18
MCF2L-230ENST00000491028 PCNPQ8WW12 178 aaKnown RBP13.91□□□□□ -0.18
MCF2L-230ENST00000491028 GNG13Q9P2W3 67 aa13.91□□□□□ -0.18
MCF2L-230ENST00000491028 PKD1L1Q8TDX9 2849 aa13.9□□□□□ -0.18
MCF2L-230ENST00000491028 UBE2G2P60604 165 aa13.9□□□□□ -0.18
MCF2L-230ENST00000491028 ICAM4Q14773 271 aa13.9□□□□□ -0.18
MCF2L-230ENST00000491028 PSG3Q16557 428 aa13.9□□□□□ -0.18
MCF2L-230ENST00000491028 GTSCR1Q86UQ5 136 aa13.9□□□□□ -0.18
MCF2L-230ENST00000491028 MAP6D1Q9H9H5 199 aa13.9□□□□□ -0.18
MCF2L-230ENST00000491028 PGPA6NDG6 321 aa13.89□□□□□ -0.19
MCF2L-230ENST00000491028 PAGE4O60829 102 aa13.89□□□□□ -0.19
MCF2L-230ENST00000491028 ODF3L2Q3SX64 289 aa13.89□□□□□ -0.19
MCF2L-230ENST00000491028 PSMG4Q5JS54 123 aa13.89□□□□□ -0.19
MCF2L-230ENST00000491028 EXOC3-AS1Q8N2X6 119 aa13.89□□□□□ -0.19
MCF2L-230ENST00000491028 RNF182Q8N6D2 247 aa13.89□□□□□ -0.19
MCF2L-230ENST00000491028 ARL6IP6Q8N6S5 226 aa13.89□□□□□ -0.19
MCF2L-230ENST00000491028 LINC00052Q96N35 136 aa13.89□□□□□ -0.19
MCF2L-230ENST00000491028 TXNDC17Q9BRA2 123 aa13.89□□□□□ -0.19
MCF2L-230ENST00000491028 YTHDF2Q9Y5A9 579 aaKnown RBP13.89□□□□□ -0.19
MCF2L-230ENST00000491028 OR11H12B2RN74 326 aa13.88□□□□□ -0.19
MCF2L-230ENST00000491028 GGTLC3B5MD39 225 aa13.88□□□□□ -0.19
MCF2L-230ENST00000491028 BCL2P10415 239 aa13.88□□□□□ -0.19
MCF2L-230ENST00000491028 HLA-DMBP28068 263 aa13.88□□□□□ -0.19
MCF2L-230ENST00000491028 CD81P60033 236 aa13.88□□□□□ -0.19
MCF2L-230ENST00000491028 IGFL4Q6B9Z1 124 aa13.88□□□□□ -0.19
MCF2L-230ENST00000491028 ZNF738Q8NE65 137 aa13.88□□□□□ -0.19
MCF2L-230ENST00000491028 RXFP4Q8TDU9 374 aa13.88□□□□□ -0.19
MCF2L-230ENST00000491028 C20orf173Q96LM9 149 aa13.88□□□□□ -0.19
MCF2L-230ENST00000491028 TCEAL7Q9BRU2 100 aa13.88□□□□□ -0.19
MCF2L-230ENST00000491028 CD7P09564 240 aa13.87□□□□□ -0.19
MCF2L-230ENST00000491028 CSN1S1P47710 185 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 143 ms