RNA–Protein interactions for RNA: ENST00000483117.1

LAPTM4A-202, Transcript of lysosomal protein transmembrane 4 alpha, humanhuman

TSL 2

Gene LAPTM4A, Length 487 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4A-202ENST00000483117 TMEM136Q6ZRR5 245 aa1.56□□□□□ -2.16
LAPTM4A-202ENST00000483117 TEN1Q86WV5 123 aa1.56□□□□□ -2.16
LAPTM4A-202ENST00000483117 LINC00471Q8N535 108 aa1.56□□□□□ -2.16
LAPTM4A-202ENST00000483117 C3orf56Q8N813 242 aa1.56□□□□□ -2.16
LAPTM4A-202ENST00000483117 WFDC11Q8NEX6 87 aa1.56□□□□□ -2.16
LAPTM4A-202ENST00000483117 OR5D14Q8NGL3 314 aa1.56□□□□□ -2.16
LAPTM4A-202ENST00000483117 COPS9Q8WXC6 57 aa1.56□□□□□ -2.16
LAPTM4A-202ENST00000483117 AQP3Q92482 292 aa1.56□□□□□ -2.16
LAPTM4A-202ENST00000483117 KRTAP4-1Q9BYQ7 146 aa1.56□□□□□ -2.16
LAPTM4A-202ENST00000483117 BCL2L10Q9HD36 194 aa1.56□□□□□ -2.16
LAPTM4A-202ENST00000483117 C14orf132Q9NPU4 83 aa1.56□□□□□ -2.16
LAPTM4A-202ENST00000483117 SAR1AQ9NR31 198 aa1.56□□□□□ -2.16
LAPTM4A-202ENST00000483117 NDUFB11Q9NX14 153 aa1.56□□□□□ -2.16
LAPTM4A-202ENST00000483117 TNFSF18Q9UNG2 199 aa1.56□□□□□ -2.16
LAPTM4A-202ENST00000483117 MAST2Q6P0Q8 1798 aa1.56□□□□□ -2.16
LAPTM4A-202ENST00000483117 NUP210Q8TEM1 1887 aaPredicted RBP1.56□□□□□ -2.16
LAPTM4A-202ENST00000483117 ARHGAP31Q2M1Z3 1444 aa1.56□□□□□ -2.16
LAPTM4A-202ENST00000483117 DLC1Q96QB1 1528 aa1.56□□□□□ -2.16
LAPTM4A-202ENST00000483117 ANKRD12Q6UB98 2062 aa1.55□□□□□ -2.16
LAPTM4A-202ENST00000483117 DOCK8Q8NF50 2099 aa1.55□□□□□ -2.16
LAPTM4A-202ENST00000483117 CACNA1SQ13698 1873 aa1.55□□□□□ -2.16
LAPTM4A-202ENST00000483117 IGLV2-18A0A075B6J9 118 aa1.55□□□□□ -2.16
LAPTM4A-202ENST00000483117 A0A0J9YX75 114 aa1.55□□□□□ -2.16
LAPTM4A-202ENST00000483117 LOC107986453A0A1B0GWG9 222 aa1.55□□□□□ -2.16
LAPTM4A-202ENST00000483117 COLCA2A8K830 154 aa1.55□□□□□ -2.16
LAPTM4A-202ENST00000483117 CORTO00230 105 aa1.55□□□□□ -2.16
LAPTM4A-202ENST00000483117 HBDP02042 147 aa1.55□□□□□ -2.16
LAPTM4A-202ENST00000483117 RBP4P02753 201 aa1.55□□□□□ -2.16
LAPTM4A-202ENST00000483117 TCRAP04437 139 aa1.55□□□□□ -2.16
LAPTM4A-202ENST00000483117 TRGC1P0CF51 173 aa1.55□□□□□ -2.16
LAPTM4A-202ENST00000483117 FABP4P15090 132 aa1.55□□□□□ -2.16
LAPTM4A-202ENST00000483117 RBP2P50120 134 aa1.55□□□□□ -2.16
LAPTM4A-202ENST00000483117 IGFBP7Q16270 282 aa1.55□□□□□ -2.16
LAPTM4A-202ENST00000483117 ESRGQ1W209 222 aa1.55□□□□□ -2.16
LAPTM4A-202ENST00000483117 ZNF181Q2M3W8 571 aa1.55□□□□□ -2.16
LAPTM4A-202ENST00000483117 KRTAP25-1Q3LHN0 102 aa1.55□□□□□ -2.16
LAPTM4A-202ENST00000483117 FAM27BQ5VT28 67 aa1.55□□□□□ -2.16
LAPTM4A-202ENST00000483117 LINC01545Q5VT33 79 aa1.55□□□□□ -2.16
LAPTM4A-202ENST00000483117 LCN15Q6UWW0 184 aa1.55□□□□□ -2.16
LAPTM4A-202ENST00000483117 IZUMO2Q6UXV1 221 aa1.55□□□□□ -2.16
LAPTM4A-202ENST00000483117 TMEM91Q6ZNR0 172 aa1.55□□□□□ -2.16
LAPTM4A-202ENST00000483117 HMGN2P46Q86SG4 172 aa1.55□□□□□ -2.16
LAPTM4A-202ENST00000483117 RPS19BP1Q86WX3 136 aaKnown RBP1.55□□□□□ -2.16
LAPTM4A-202ENST00000483117 KRTAP13-1Q8IUC0 172 aa1.55□□□□□ -2.16
LAPTM4A-202ENST00000483117 RNF182Q8N6D2 247 aa1.55□□□□□ -2.16
LAPTM4A-202ENST00000483117 TEX29Q8N6K0 151 aa1.55□□□□□ -2.16
LAPTM4A-202ENST00000483117 CHCHD1Q96BP2 118 aaKnown RBP1.55□□□□□ -2.16
LAPTM4A-202ENST00000483117 MPC1Q9Y5U8 109 aa1.55□□□□□ -2.16
LAPTM4A-202ENST00000483117 MINOS1-NBL1R4GNA1 71 aa1.55□□□□□ -2.16
LAPTM4A-202ENST00000483117 HSPE1-MOB4S4R3N1 261 aa1.55□□□□□ -2.16
LAPTM4A-202ENST00000483117 FAM135BQ49AJ0 1406 aa1.55□□□□□ -2.16
LAPTM4A-202ENST00000483117 CNTLNQ9NXG0 1405 aa1.55□□□□□ -2.16
LAPTM4A-202ENST00000483117 ARHGEF28Q8N1W1 1705 aaKnown RBP1.54□□□□□ -2.16
LAPTM4A-202ENST00000483117 TRPM3Q9HCF6 1732 aaPredicted RBP1.54□□□□□ -2.16
LAPTM4A-202ENST00000483117 MYH10P35580 1976 aa1.54□□□□□ -2.16
LAPTM4A-202ENST00000483117 DSCAMO60469 2012 aa1.54□□□□□ -2.16
LAPTM4A-202ENST00000483117 ATG2BQ96BY7 2078 aa1.54□□□□□ -2.16
LAPTM4A-202ENST00000483117 IGLV3-9A0A075B6K5 115 aa1.54□□□□□ -2.16
LAPTM4A-202ENST00000483117 G3V3Q6 166 aa1.54□□□□□ -2.16
LAPTM4A-202ENST00000483117 K7ERJ3 54 aa1.54□□□□□ -2.16
LAPTM4A-202ENST00000483117 OR1I1O60431 355 aa1.54□□□□□ -2.16
LAPTM4A-202ENST00000483117 CLPSP04118 112 aa1.54□□□□□ -2.16
LAPTM4A-202ENST00000483117 SLC25A5P05141 298 aaKnown RBP1.54□□□□□ -2.16
LAPTM4A-202ENST00000483117 CCL4P13236 92 aa1.54□□□□□ -2.16
LAPTM4A-202ENST00000483117 HIST1H1DP16402 221 aaKnown RBP1.54□□□□□ -2.16
LAPTM4A-202ENST00000483117 ETV6P41212 452 aa1.54□□□□□ -2.16
LAPTM4A-202ENST00000483117 GNG4P50150 75 aa1.54□□□□□ -2.16
LAPTM4A-202ENST00000483117 FOXA3P55318 350 aaPredicted RBP1.54□□□□□ -2.16
LAPTM4A-202ENST00000483117 TMEM258P61165 79 aa1.54□□□□□ -2.16
LAPTM4A-202ENST00000483117 PPP3R1P63098 170 aa1.54□□□□□ -2.16
LAPTM4A-202ENST00000483117 CDK5R1Q15078 307 aa1.54□□□□□ -2.16
LAPTM4A-202ENST00000483117 GLIPR1L1Q6UWM5 242 aa1.54□□□□□ -2.16
LAPTM4A-202ENST00000483117 ZNF826PQ6ZT77 177 aa1.54□□□□□ -2.16
LAPTM4A-202ENST00000483117 C10orf111Q8N326 155 aa1.54□□□□□ -2.16
LAPTM4A-202ENST00000483117 ZNF436-AS1Q8NC38 126 aaPredicted RBP1.54□□□□□ -2.16
LAPTM4A-202ENST00000483117 CCL4L1Q8NHW4 92 aa1.54□□□□□ -2.16
LAPTM4A-202ENST00000483117 DEDD2Q8WXF8 326 aa1.54□□□□□ -2.16
LAPTM4A-202ENST00000483117 PP6455Q8WZ26 134 aa1.54□□□□□ -2.16
LAPTM4A-202ENST00000483117 C14orf144Q96I85 54 aa1.54□□□□□ -2.16
LAPTM4A-202ENST00000483117 Q9BRP9 147 aa1.54□□□□□ -2.16
LAPTM4A-202ENST00000483117 SNRNP25Q9BV90 132 aaKnown RBP1.54□□□□□ -2.16
LAPTM4A-202ENST00000483117 METTL1Q9UBP6 276 aaKnown RBP1.54□□□□□ -2.16
LAPTM4A-202ENST00000483117 TPRKBQ9Y3C4 175 aa1.54□□□□□ -2.16
LAPTM4A-202ENST00000483117 R4GN34 69 aa1.54□□□□□ -2.16
LAPTM4A-202ENST00000483117 SCAF11Q99590 1463 aaKnown RBP1.54□□□□□ -2.16
LAPTM4A-202ENST00000483117 PLXND1Q9Y4D7 1925 aa1.54□□□□□ -2.16
LAPTM4A-202ENST00000483117 TRBV20-1A0A075B6N2 111 aa1.53□□□□□ -2.16
LAPTM4A-202ENST00000483117 IFITM5A6NNB3 132 aa1.53□□□□□ -2.16
LAPTM4A-202ENST00000483117 HMSDA8MTL9 139 aa1.53□□□□□ -2.16
LAPTM4A-202ENST00000483117 OBSL1O75147 1896 aa1.53□□□□□ -2.16
LAPTM4A-202ENST00000483117 PMP2P02689 132 aa1.53□□□□□ -2.16
LAPTM4A-202ENST00000483117 CTSDP07339 412 aaPredicted RBP1.53□□□□□ -2.16
LAPTM4A-202ENST00000483117 PYYP10082 97 aa1.53□□□□□ -2.16
LAPTM4A-202ENST00000483117 FBN1P35555 2871 aaKnown RBP1.53□□□□□ -2.16
LAPTM4A-202ENST00000483117 ERHP84090 104 aaKnown RBP1.53□□□□□ -2.16
LAPTM4A-202ENST00000483117 RELAQ04206 551 aa1.53□□□□□ -2.16
LAPTM4A-202ENST00000483117 DIAPH2-AS1Q14236 149 aa1.53□□□□□ -2.16
LAPTM4A-202ENST00000483117 NNATQ16517 81 aa1.53□□□□□ -2.16
LAPTM4A-202ENST00000483117 Q6ZQT0 140 aa1.53□□□□□ -2.16
LAPTM4A-202ENST00000483117 C3orf62Q6ZUJ4 267 aa1.53□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms