RNA–Protein interactions for RNA: ENST00000478896.2

VCL-205, Transcript of vinculin, humanhuman

TSL 5

Gene VCL, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-205ENST00000478896 MGAT4CQ9UBM8 478 aa9.29□□□□□ -0.92
VCL-205ENST00000478896 RNF24Q9Y225 148 aa9.29□□□□□ -0.92
VCL-205ENST00000478896 V9GYH0 126 aa9.29□□□□□ -0.92
VCL-205ENST00000478896 RYR1P21817 5038 aa9.29□□□□□ -0.92
VCL-205ENST00000478896 SCGB1D2O95969 90 aa9.28□□□□□ -0.92
VCL-205ENST00000478896 INPP1P49441 399 aa9.28□□□□□ -0.92
VCL-205ENST00000478896 PLP1P60201 277 aa9.28□□□□□ -0.92
VCL-205ENST00000478896 UBE2MP61081 183 aaKnown RBP9.28□□□□□ -0.92
VCL-205ENST00000478896 ID3Q02535 119 aa9.28□□□□□ -0.92
VCL-205ENST00000478896 TMEM263Q8WUH6 116 aaKnown RBP9.28□□□□□ -0.92
VCL-205ENST00000478896 RNF141Q8WVD5 230 aa9.28□□□□□ -0.92
VCL-205ENST00000478896 KRTAP4-5Q9BYR2 181 aa9.28□□□□□ -0.92
VCL-205ENST00000478896 ARV1Q9H2C2 271 aa9.28□□□□□ -0.92
VCL-205ENST00000478896 NOP10Q9NPE3 64 aaKnown RBP9.28□□□□□ -0.92
VCL-205ENST00000478896 LINC00588Q9Y4M8 146 aa9.28□□□□□ -0.92
VCL-205ENST00000478896 C9orf170A2RU37 121 aa9.27□□□□□ -0.93
VCL-205ENST00000478896 CCNKO75909 580 aa9.27□□□□□ -0.93
VCL-205ENST00000478896 METTL15P1P0C7V9 234 aa9.27□□□□□ -0.93
VCL-205ENST00000478896 DLK1P80370 383 aa9.27□□□□□ -0.93
VCL-205ENST00000478896 SLC38A11Q08AI6 406 aa9.27□□□□□ -0.93
VCL-205ENST00000478896 TEPPQ6URK8 271 aa9.27□□□□□ -0.93
VCL-205ENST00000478896 SSX7Q7RTT5 188 aa9.27□□□□□ -0.93
VCL-205ENST00000478896 OR10P1Q8NGE3 313 aa9.27□□□□□ -0.93
VCL-205ENST00000478896 OR10J6PQ8NGY7 276 aa9.27□□□□□ -0.93
VCL-205ENST00000478896 RPUSD4Q96CM3 377 aaKnown RBP9.27□□□□□ -0.93
VCL-205ENST00000478896 NPVFQ9HCQ7 196 aa9.27□□□□□ -0.93
VCL-205ENST00000478896 CCDC160A6NGH7 325 aa9.26□□□□□ -0.93
VCL-205ENST00000478896 PMS2P5A8MQ11 134 aa9.26□□□□□ -0.93
VCL-205ENST00000478896 CDK2AP2O75956 126 aa9.26□□□□□ -0.93
VCL-205ENST00000478896 SNRPCP09234 159 aaKnown RBP9.26□□□□□ -0.93
VCL-205ENST00000478896 CXCL2P19875 107 aa9.26□□□□□ -0.93
VCL-205ENST00000478896 OR5I1Q13606 314 aa9.26□□□□□ -0.93
VCL-205ENST00000478896 LCN15Q6UWW0 184 aa9.26□□□□□ -0.93
VCL-205ENST00000478896 ZNF493Q6ZR52 646 aa9.26□□□□□ -0.93
VCL-205ENST00000478896 CCDC190Q86UF4 302 aa9.26□□□□□ -0.93
VCL-205ENST00000478896 MAPKAPK5-AS1Q8N8E1 139 aa9.26□□□□□ -0.93
VCL-205ENST00000478896 RNASE8Q8TDE3 154 aaKnown RBP9.26□□□□□ -0.93
VCL-205ENST00000478896 GNPNAT1Q96EK6 184 aaPredicted RBP9.26□□□□□ -0.93
VCL-205ENST00000478896 SLC50A1Q9BRV3 221 aa9.26□□□□□ -0.93
VCL-205ENST00000478896 PKD1P98161 4303 aa9.26□□□□□ -0.93
VCL-205ENST00000478896 ABCA13Q86UQ4 5058 aa9.26□□□□□ -0.93
VCL-205ENST00000478896 H7BYZ3 331 aa9.25□□□□□ -0.93
VCL-205ENST00000478896 GOSR2O14653 212 aa9.25□□□□□ -0.93
VCL-205ENST00000478896 TTC32Q5I0X7 151 aa9.25□□□□□ -0.93
VCL-205ENST00000478896 LINC00305Q7Z4B0 112 aa9.25□□□□□ -0.93
VCL-205ENST00000478896 ZNF546Q86UE3 836 aa9.25□□□□□ -0.93
VCL-205ENST00000478896 CCDC28AQ8IWP9 274 aa9.25□□□□□ -0.93
VCL-205ENST00000478896 SMIM8Q96KF7 97 aa9.25□□□□□ -0.93
VCL-205ENST00000478896 C20orf144Q9BQM9 153 aa9.25□□□□□ -0.93
VCL-205ENST00000478896 Q9H8V8 135 aa9.25□□□□□ -0.93
VCL-205ENST00000478896 TRAV26-1A0A087WT03 109 aa9.24□□□□□ -0.93
VCL-205ENST00000478896 SNURFLB1AK76 121 aa9.24□□□□□ -0.93
VCL-205ENST00000478896 FNDC10F2Z333 226 aa9.24□□□□□ -0.93
VCL-205ENST00000478896 RLN2P04090 185 aa9.24□□□□□ -0.93
VCL-205ENST00000478896 C4orf46Q504U0 113 aa9.24□□□□□ -0.93
VCL-205ENST00000478896 PXDC1Q5TGL8 231 aa9.24□□□□□ -0.93
VCL-205ENST00000478896 TRIQKQ629K1 86 aa9.24□□□□□ -0.93
VCL-205ENST00000478896 TMEM14EPQ6UXP3 125 aa9.24□□□□□ -0.93
VCL-205ENST00000478896 BPIFA4PQ86YQ2 179 aa9.24□□□□□ -0.93
VCL-205ENST00000478896 PARD6GQ9BYG4 376 aaPredicted RBP9.24□□□□□ -0.93
VCL-205ENST00000478896 ZNF331Q9NQX6 463 aaPredicted RBP9.24□□□□□ -0.93
VCL-205ENST00000478896 A0A0J9YY99 117 aa9.23□□□□□ -0.93
VCL-205ENST00000478896 GAGE12BA1L429 117 aa9.23□□□□□ -0.93
VCL-205ENST00000478896 NAP1L6A6NFF2 107 aa9.23□□□□□ -0.93
VCL-205ENST00000478896 J3KRW8 73 aa9.23□□□□□ -0.93
VCL-205ENST00000478896 K7EPK0 472 aa9.23□□□□□ -0.93
VCL-205ENST00000478896 MRPS12O15235 138 aaKnown RBP9.23□□□□□ -0.93
VCL-205ENST00000478896 COX7A2P2O60397 106 aa9.23□□□□□ -0.93
VCL-205ENST00000478896 TSC22D2O75157 780 aa9.23□□□□□ -0.93
VCL-205ENST00000478896 GAGE7O76087 117 aa9.23□□□□□ -0.93
VCL-205ENST00000478896 NDUFB6O95139 128 aa9.23□□□□□ -0.93
VCL-205ENST00000478896 OR4E1P0C645 316 aa9.23□□□□□ -0.93
VCL-205ENST00000478896 GAGE12FP0CL80 117 aa9.23□□□□□ -0.93
VCL-205ENST00000478896 GAGE12GP0CL81 117 aa9.23□□□□□ -0.93
VCL-205ENST00000478896 GAGE12IP0CL82 117 aa9.23□□□□□ -0.93
VCL-205ENST00000478896 M6PRP20645 277 aa9.23□□□□□ -0.93
VCL-205ENST00000478896 IAH1Q2TAA2 248 aaPredicted RBP9.23□□□□□ -0.93
VCL-205ENST00000478896 SPANXN2Q5MJ10 180 aa9.23□□□□□ -0.93
VCL-205ENST00000478896 PATE2Q6UY27 113 aa9.23□□□□□ -0.93
VCL-205ENST00000478896 SPATA12Q7Z6I5 190 aa9.23□□□□□ -0.93
VCL-205ENST00000478896 GSKIPQ9P0R6 139 aa9.23□□□□□ -0.93
VCL-205ENST00000478896 FLVCR2Q9UPI3 526 aa9.23□□□□□ -0.93
VCL-205ENST00000478896 H3BTX0 84 aa9.22□□□□□ -0.93
VCL-205ENST00000478896 AGPAT2O15120 278 aa9.22□□□□□ -0.93
VCL-205ENST00000478896 KIR3DS1Q14943 382 aa9.22□□□□□ -0.93
VCL-205ENST00000478896 GFI1BQ5VTD9 330 aa9.22□□□□□ -0.93
VCL-205ENST00000478896 RXFP4Q8TDU9 374 aa9.22□□□□□ -0.93
VCL-205ENST00000478896 SRRQ9GZT4 340 aa9.22□□□□□ -0.93
VCL-205ENST00000478896 LINC00854A0A1B0GVQ3 168 aa9.21□□□□□ -0.94
VCL-205ENST00000478896 ZNF701M0R085 212 aaPredicted RBP9.21□□□□□ -0.94
VCL-205ENST00000478896 SLC17A3O00476 420 aa9.21□□□□□ -0.94
VCL-205ENST00000478896 TAS2R30P59541 319 aa9.21□□□□□ -0.94
VCL-205ENST00000478896 C10orf113Q5VZT2 155 aa9.21□□□□□ -0.94
VCL-205ENST00000478896 RCL1Q9Y2P8 373 aaKnown RBP9.21□□□□□ -0.94
VCL-205ENST00000478896 PXMP4Q9Y6I8 212 aa9.21□□□□□ -0.94
VCL-205ENST00000478896 PRAC2D3DTV9 90 aa9.2□□□□□ -0.94
VCL-205ENST00000478896 L7N2F9 121 aa9.2□□□□□ -0.94
VCL-205ENST00000478896 LEPP41159 167 aa9.2□□□□□ -0.94
VCL-205ENST00000478896 VAMP2P63027 116 aa9.2□□□□□ -0.94
VCL-205ENST00000478896 OPCMLQ14982 345 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms