RNA–Protein interactions for RNA: ENST00000477888.1

SPTLC1-205, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 5

Gene SPTLC1, Length 359 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-205ENST00000477888 OR4D5Q8NGN0 318 aa4.79□□□□□ -1.64
SPTLC1-205ENST00000477888 OR5H6Q8NGV6 325 aa4.79□□□□□ -1.64
SPTLC1-205ENST00000477888 HHLA3Q9XRX5 114 aa4.79□□□□□ -1.64
SPTLC1-205ENST00000477888 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.78□□□□□ -1.64
SPTLC1-205ENST00000477888 A0A0A6YYH2 397 aa4.78□□□□□ -1.64
SPTLC1-205ENST00000477888 A6NJ64 397 aa4.78□□□□□ -1.64
SPTLC1-205ENST00000477888 K7EQD1 137 aa4.78□□□□□ -1.64
SPTLC1-205ENST00000477888 PAGE4O60829 102 aa4.78□□□□□ -1.64
SPTLC1-205ENST00000477888 CXCL3P19876 107 aa4.78□□□□□ -1.64
SPTLC1-205ENST00000477888 AKR1C2P52895 323 aa4.78□□□□□ -1.64
SPTLC1-205ENST00000477888 SLAQ13239 276 aa4.78□□□□□ -1.64
SPTLC1-205ENST00000477888 FHL2Q14192 279 aa4.78□□□□□ -1.64
SPTLC1-205ENST00000477888 ZNF674Q2M3X9 581 aa4.78□□□□□ -1.64
SPTLC1-205ENST00000477888 TDRG1Q3Y452 100 aa4.78□□□□□ -1.64
SPTLC1-205ENST00000477888 GFI1BQ5VTD9 330 aa4.78□□□□□ -1.64
SPTLC1-205ENST00000477888 C22orf42Q6IC83 251 aa4.78□□□□□ -1.64
SPTLC1-205ENST00000477888 C10orf67Q8IYJ2 551 aa4.78□□□□□ -1.64
SPTLC1-205ENST00000477888 ARRDC1Q8N5I2 433 aa4.78□□□□□ -1.64
SPTLC1-205ENST00000477888 C11orf72Q8NBR9 251 aa4.78□□□□□ -1.64
SPTLC1-205ENST00000477888 ZNF738Q8NE65 137 aa4.78□□□□□ -1.64
SPTLC1-205ENST00000477888 OR5H2Q8NGV7 314 aa4.78□□□□□ -1.64
SPTLC1-205ENST00000477888 RBPMSQ93062 196 aaKnown RBP4.78□□□□□ -1.64
SPTLC1-205ENST00000477888 PPP1R14BQ96C90 147 aa4.78□□□□□ -1.64
SPTLC1-205ENST00000477888 ST6GAL2Q96JF0 529 aa4.78□□□□□ -1.64
SPTLC1-205ENST00000477888 TP53RKQ96S44 253 aa4.78□□□□□ -1.64
SPTLC1-205ENST00000477888 PAXXQ9BUH6 204 aa4.78□□□□□ -1.64
SPTLC1-205ENST00000477888 DUSP21Q9H596 190 aa4.78□□□□□ -1.64
SPTLC1-205ENST00000477888 SLC25A22Q9H936 323 aa4.78□□□□□ -1.64
SPTLC1-205ENST00000477888 FUT9Q9Y231 359 aa4.78□□□□□ -1.64
SPTLC1-205ENST00000477888 LPAP08519 4548 aa4.77□□□□□ -1.65
SPTLC1-205ENST00000477888 TRGV1A0A0A0MS02 117 aa4.77□□□□□ -1.65
SPTLC1-205ENST00000477888 IGHV3-38A0A0C4DH36 116 aa4.77□□□□□ -1.65
SPTLC1-205ENST00000477888 ZFP92A6NM28 416 aa4.77□□□□□ -1.65
SPTLC1-205ENST00000477888 SPINK4O60575 86 aa4.77□□□□□ -1.65
SPTLC1-205ENST00000477888 ATG12O94817 140 aa4.77□□□□□ -1.65
SPTLC1-205ENST00000477888 RPS19P39019 145 aaKnown RBP4.77□□□□□ -1.65
SPTLC1-205ENST00000477888 TAS2R46P59540 309 aa4.77□□□□□ -1.65
SPTLC1-205ENST00000477888 SUMO2P61956 95 aaKnown RBP4.77□□□□□ -1.65
SPTLC1-205ENST00000477888 OR2F1Q13607 317 aa4.77□□□□□ -1.65
SPTLC1-205ENST00000477888 NMSQ5H8A3 153 aa4.77□□□□□ -1.65
SPTLC1-205ENST00000477888 LINC01556Q5JQF7 62 aa4.77□□□□□ -1.65
SPTLC1-205ENST00000477888 MORN5Q5VZ52 161 aa4.77□□□□□ -1.65
SPTLC1-205ENST00000477888 PACRGLQ8N7B6 248 aa4.77□□□□□ -1.65
SPTLC1-205ENST00000477888 OR1B1Q8NGR6 318 aa4.77□□□□□ -1.65
SPTLC1-205ENST00000477888 C8orf49Q96NF6 230 aa4.77□□□□□ -1.65
SPTLC1-205ENST00000477888 MRPL32Q9BYC8 188 aaKnown RBP4.77□□□□□ -1.65
SPTLC1-205ENST00000477888 PARD6GQ9BYG4 376 aaPredicted RBP4.77□□□□□ -1.65
SPTLC1-205ENST00000477888 Q9HAA7 133 aa4.77□□□□□ -1.65
SPTLC1-205ENST00000477888 IFT46Q9NQC8 304 aa4.77□□□□□ -1.65
SPTLC1-205ENST00000477888 GSN-AS1Q9NRJ2 163 aa4.77□□□□□ -1.65
SPTLC1-205ENST00000477888 CTNNBIP1Q9NSA3 81 aaPredicted RBP4.77□□□□□ -1.65
SPTLC1-205ENST00000477888 NDUFB11Q9NX14 153 aa4.77□□□□□ -1.65
SPTLC1-205ENST00000477888 SCN3BQ9NY72 215 aa4.77□□□□□ -1.65
SPTLC1-205ENST00000477888 MGAT4CQ9UBM8 478 aa4.77□□□□□ -1.65
SPTLC1-205ENST00000477888 HSPB7Q9UBY9 170 aa4.77□□□□□ -1.65
SPTLC1-205ENST00000477888 IGKV1OR2-108A0A075B7D4 117 aa4.76□□□□□ -1.65
SPTLC1-205ENST00000477888 DIRC3C9JPN6 131 aa4.76□□□□□ -1.65
SPTLC1-205ENST00000477888 LECT2O14960 151 aa4.76□□□□□ -1.65
SPTLC1-205ENST00000477888 B3GALNT1O75752 331 aa4.76□□□□□ -1.65
SPTLC1-205ENST00000477888 IGHV3-53P01767 116 aa4.76□□□□□ -1.65
SPTLC1-205ENST00000477888 SRIP30626 198 aa4.76□□□□□ -1.65
SPTLC1-205ENST00000477888 HRH1P35367 487 aa4.76□□□□□ -1.65
SPTLC1-205ENST00000477888 RND3P61587 244 aa4.76□□□□□ -1.65
SPTLC1-205ENST00000477888 FGL1Q08830 312 aa4.76□□□□□ -1.65
SPTLC1-205ENST00000477888 NOXA1Q86UR1 476 aa4.76□□□□□ -1.65
SPTLC1-205ENST00000477888 FAM219AQ8IW50 185 aa4.76□□□□□ -1.65
SPTLC1-205ENST00000477888 GPR82Q96P67 336 aa4.76□□□□□ -1.65
SPTLC1-205ENST00000477888 PYGO2Q9BRQ0 406 aa4.76□□□□□ -1.65
SPTLC1-205ENST00000477888 C8orf4Q9NR00 106 aa4.76□□□□□ -1.65
SPTLC1-205ENST00000477888 TRAV34A0A0B4J273 112 aa4.75□□□□□ -1.65
SPTLC1-205ENST00000477888 C3orf85A0A1B0GTC6 90 aa4.75□□□□□ -1.65
SPTLC1-205ENST00000477888 E5RGE8 158 aa4.75□□□□□ -1.65
SPTLC1-205ENST00000477888 CCNKO75909 580 aa4.75□□□□□ -1.65
SPTLC1-205ENST00000477888 FABP1P07148 127 aa4.75□□□□□ -1.65
SPTLC1-205ENST00000477888 PI3P19957 117 aa4.75□□□□□ -1.65
SPTLC1-205ENST00000477888 GATA2P23769 480 aaPredicted RBP4.75□□□□□ -1.65
SPTLC1-205ENST00000477888 HLA-DMAP28067 261 aa4.75□□□□□ -1.65
SPTLC1-205ENST00000477888 GPX4P36969 197 aaPredicted RBP4.75□□□□□ -1.65
SPTLC1-205ENST00000477888 TSPAN5P62079 268 aa4.75□□□□□ -1.65
SPTLC1-205ENST00000477888 TRIM16LQ309B1 348 aa4.75□□□□□ -1.65
SPTLC1-205ENST00000477888 SP6Q3SY56 376 aa4.75□□□□□ -1.65
SPTLC1-205ENST00000477888 ARL6IP6Q8N6S5 226 aa4.75□□□□□ -1.65
SPTLC1-205ENST00000477888 ZNF431Q8TF32 576 aaPredicted RBP4.75□□□□□ -1.65
SPTLC1-205ENST00000477888 BLNKQ8WV28 456 aa4.75□□□□□ -1.65
SPTLC1-205ENST00000477888 RPUSD4Q96CM3 377 aaKnown RBP4.75□□□□□ -1.65
SPTLC1-205ENST00000477888 TRGV9Q99603 122 aa4.75□□□□□ -1.65
SPTLC1-205ENST00000477888 VGLL1Q99990 258 aa4.75□□□□□ -1.65
SPTLC1-205ENST00000477888 TM2D2Q9BX73 214 aa4.75□□□□□ -1.65
SPTLC1-205ENST00000477888 KLF12Q9Y4X4 402 aa4.75□□□□□ -1.65
SPTLC1-205ENST00000477888 U3KQ87 197 aa4.75□□□□□ -1.65
SPTLC1-205ENST00000477888 TRGV11A0A075B6L2 103 aa4.74□□□□□ -1.65
SPTLC1-205ENST00000477888 TRAV12-3A0A0B4J271 114 aa4.74□□□□□ -1.65
SPTLC1-205ENST00000477888 RBFOX3A6NFN3 312 aa4.74□□□□□ -1.65
SPTLC1-205ENST00000477888 CEBPZOSA8MTT3 80 aa4.74□□□□□ -1.65
SPTLC1-205ENST00000477888 CFDP00746 253 aaPredicted RBP4.74□□□□□ -1.65
SPTLC1-205ENST00000477888 TNFSF8P32971 234 aa4.74□□□□□ -1.65
SPTLC1-205ENST00000477888 CAMPP49913 170 aa4.74□□□□□ -1.65
SPTLC1-205ENST00000477888 PIGPP57054 158 aa4.74□□□□□ -1.65
SPTLC1-205ENST00000477888 CST9LP1Q5W188 147 aa4.74□□□□□ -1.65
SPTLC1-205ENST00000477888 TMEM182Q6ZP80 229 aaPredicted RBP4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms