RNA–Protein interactions for RNA: ENST00000473778.5

C9orf3-214, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 2,396 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-214ENST00000473778 IGHV1-24A0A0C4DH33 117 aa8.64□□□□□ -1.03
C9orf3-214ENST00000473778 A8MWL6 223 aa8.64□□□□□ -1.03
C9orf3-214ENST00000473778 KLF17Q5JT82 389 aaPredicted RBP8.64□□□□□ -1.03
C9orf3-214ENST00000473778 PRNTQ86SH4 94 aa8.64□□□□□ -1.03
C9orf3-214ENST00000473778 CHRDL1Q9BU40 450 aa8.64□□□□□ -1.03
C9orf3-214ENST00000473778 PPIAL4CA0A0B4J2A2 164 aa8.64□□□□□ -1.03
C9orf3-214ENST00000473778 OR2T8A6NH00 312 aa8.64□□□□□ -1.03
C9orf3-214ENST00000473778 TIMM23O14925 209 aa8.64□□□□□ -1.03
C9orf3-214ENST00000473778 PPIAL4GP0DN37 164 aa8.64□□□□□ -1.03
C9orf3-214ENST00000473778 RBPJQ06330 500 aa8.64□□□□□ -1.03
C9orf3-214ENST00000473778 CT83Q5H943 113 aa8.64□□□□□ -1.03
C9orf3-214ENST00000473778 RPEQ96AT9 228 aa8.64□□□□□ -1.03
C9orf3-214ENST00000473778 ZC2HC1AQ96GY0 325 aa8.64□□□□□ -1.03
C9orf3-214ENST00000473778 MCRIP2Q9BUT9 160 aaKnown RBP8.64□□□□□ -1.03
C9orf3-214ENST00000473778 VPS13CQ709C8 3753 aa8.64□□□□□ -1.03
C9orf3-214ENST00000473778 COL8A1P27658 744 aa8.63□□□□□ -1.03
C9orf3-214ENST00000473778 CDSNQ15517 529 aa8.63□□□□□ -1.03
C9orf3-214ENST00000473778 RBPMS2Q6ZRY4 209 aaKnown RBP8.63□□□□□ -1.03
C9orf3-214ENST00000473778 S100A7AQ86SG5 101 aa8.63□□□□□ -1.03
C9orf3-214ENST00000473778 RASL11BQ9BPW5 248 aa8.63□□□□□ -1.03
C9orf3-214ENST00000473778 OTORQ9NRC9 128 aa8.63□□□□□ -1.03
C9orf3-214ENST00000473778 ATRXP46100 2492 aa8.63□□□□□ -1.03
C9orf3-214ENST00000473778 TRAV9-2A0A087WT02 112 aa8.63□□□□□ -1.03
C9orf3-214ENST00000473778 B9A039 149 aa8.63□□□□□ -1.03
C9orf3-214ENST00000473778 SAP30O75446 220 aa8.63□□□□□ -1.03
C9orf3-214ENST00000473778 CRIP1P50238 77 aa8.63□□□□□ -1.03
C9orf3-214ENST00000473778 Q5PR19 223 aa8.63□□□□□ -1.03
C9orf3-214ENST00000473778 TMEM14CQ9P0S9 112 aa8.63□□□□□ -1.03
C9orf3-214ENST00000473778 WNK2Q9Y3S1 2297 aa8.63□□□□□ -1.03
C9orf3-214ENST00000473778 TRBV19A0A075B6N1 114 aa8.62□□□□□ -1.03
C9orf3-214ENST00000473778 M0R3E3 92 aa8.62□□□□□ -1.03
C9orf3-214ENST00000473778 SIGLEC15Q6ZMC9 328 aa8.62□□□□□ -1.03
C9orf3-214ENST00000473778 GFRA4Q9GZZ7 299 aa8.62□□□□□ -1.03
C9orf3-214ENST00000473778 VSTM5A8MXK1 200 aa8.62□□□□□ -1.03
C9orf3-214ENST00000473778 MRPS12O15235 138 aaKnown RBP8.62□□□□□ -1.03
C9orf3-214ENST00000473778 CRXO43186 299 aaPredicted RBP8.62□□□□□ -1.03
C9orf3-214ENST00000473778 ARMS2P0C7Q2 107 aa8.62□□□□□ -1.03
C9orf3-214ENST00000473778 KLRD1Q13241 179 aa8.62□□□□□ -1.03
C9orf3-214ENST00000473778 PLGLAQ15195 96 aa8.62□□□□□ -1.03
C9orf3-214ENST00000473778 MPV17L2Q567V2 206 aa8.62□□□□□ -1.03
C9orf3-214ENST00000473778 ZNF491Q8N8L2 437 aa8.62□□□□□ -1.03
C9orf3-214ENST00000473778 NGBQ9NPG2 151 aa8.62□□□□□ -1.03
C9orf3-214ENST00000473778 HILPDAQ9Y5L2 63 aa8.62□□□□□ -1.03
C9orf3-214ENST00000473778 CD3EP07766 207 aa8.61□□□□□ -1.03
C9orf3-214ENST00000473778 ZNF672Q499Z4 452 aaPredicted RBP8.61□□□□□ -1.03
C9orf3-214ENST00000473778 PRSS57Q6UWY2 283 aa8.61□□□□□ -1.03
C9orf3-214ENST00000473778 DAZAP1Q96EP5 407 aaKnown RBP8.61□□□□□ -1.03
C9orf3-214ENST00000473778 SHANK2-AS3Q9BTD1 123 aa8.61□□□□□ -1.03
C9orf3-214ENST00000473778 TMEM70Q9BUB7 260 aa8.61□□□□□ -1.03
C9orf3-214ENST00000473778 ONECUT1Q9UBC0 465 aa8.61□□□□□ -1.03
C9orf3-214ENST00000473778 CACNA1BQ00975 2339 aa8.61□□□□□ -1.03
C9orf3-214ENST00000473778 hDV102S1A0JD36 115 aa8.61□□□□□ -1.03
C9orf3-214ENST00000473778 H3BRN7 92 aa8.61□□□□□ -1.03
C9orf3-214ENST00000473778 DEFB125Q8N687 156 aa8.61□□□□□ -1.03
C9orf3-214ENST00000473778 CFHR4Q92496 578 aa8.61□□□□□ -1.03
C9orf3-214ENST00000473778 IGF2RP11717 2491 aa8.6□□□□□ -1.03
C9orf3-214ENST00000473778 A0A1W2PRD5 423 aa8.6□□□□□ -1.03
C9orf3-214ENST00000473778 A0A1W2PRF3 423 aa8.6□□□□□ -1.03
C9orf3-214ENST00000473778 A0A1W2PRM7 423 aa8.6□□□□□ -1.03
C9orf3-214ENST00000473778 OR4C46A6NHA9 309 aa8.6□□□□□ -1.03
C9orf3-214ENST00000473778 G3V4G9 280 aa8.6□□□□□ -1.03
C9orf3-214ENST00000473778 SYS1-DBNDD2H3BUS1 97 aa8.6□□□□□ -1.03
C9orf3-214ENST00000473778 CNIH1O95406 144 aa8.6□□□□□ -1.03
C9orf3-214ENST00000473778 IL4P05112 153 aa8.6□□□□□ -1.03
C9orf3-214ENST00000473778 PSG9Q00887 426 aa8.6□□□□□ -1.03
C9orf3-214ENST00000473778 SAMD13Q5VXD3 122 aa8.6□□□□□ -1.03
C9orf3-214ENST00000473778 C8orf49Q96NF6 230 aa8.6□□□□□ -1.03
C9orf3-214ENST00000473778 NDFIP1Q9BT67 221 aa8.6□□□□□ -1.03
C9orf3-214ENST00000473778 SOX21Q9Y651 276 aaPredicted RBP8.6□□□□□ -1.03
C9orf3-214ENST00000473778 FAM90A27PA6NNH2 459 aa8.59□□□□□ -1.03
C9orf3-214ENST00000473778 F8W735 103 aaPredicted RBP8.59□□□□□ -1.03
C9orf3-214ENST00000473778 CSN3P07498 182 aa8.59□□□□□ -1.03
C9orf3-214ENST00000473778 NDPQ00604 133 aa8.59□□□□□ -1.03
C9orf3-214ENST00000473778 FER1L6-AS1Q8NA97 138 aa8.59□□□□□ -1.03
C9orf3-214ENST00000473778 RNF125Q96EQ8 232 aa8.59□□□□□ -1.03
C9orf3-214ENST00000473778 FAM231BA6NCW3 169 aa8.59□□□□□ -1.03
C9orf3-214ENST00000473778 CHEK1O14757 476 aa8.59□□□□□ -1.03
C9orf3-214ENST00000473778 LEPROTL1O95214 131 aa8.59□□□□□ -1.03
C9orf3-214ENST00000473778 HLA-DRB1P01911 266 aa8.59□□□□□ -1.03
C9orf3-214ENST00000473778 BVES-AS1Q5T3Y7 98 aa8.59□□□□□ -1.03
C9orf3-214ENST00000473778 LY6G5BQ8NDX9 201 aa8.59□□□□□ -1.03
C9orf3-214ENST00000473778 ZNF414Q96IQ9 312 aa8.59□□□□□ -1.03
C9orf3-214ENST00000473778 FANCD2OSQ96PS1 177 aa8.59□□□□□ -1.03
C9orf3-214ENST00000473778 TMUB1Q9BVT8 246 aa8.59□□□□□ -1.03
C9orf3-214ENST00000473778 NUDT3O95989 172 aa8.58□□□□□ -1.04
C9orf3-214ENST00000473778 FAM106CPP0CH98 169 aa8.58□□□□□ -1.04
C9orf3-214ENST00000473778 FCGR2BP31994 310 aaPredicted RBP8.58□□□□□ -1.04
C9orf3-214ENST00000473778 FOXE3Q13461 319 aa8.58□□□□□ -1.04
C9orf3-214ENST00000473778 FAM106AQ4KMX7 169 aa8.58□□□□□ -1.04
C9orf3-214ENST00000473778 BPIFA4PQ86YQ2 179 aa8.58□□□□□ -1.04
C9orf3-214ENST00000473778 DYNAPQ8N1N2 210 aa8.58□□□□□ -1.04
C9orf3-214ENST00000473778 NEU4Q8WWR8 484 aaPredicted RBP8.58□□□□□ -1.04
C9orf3-214ENST00000473778 CHCHD1Q96BP2 118 aaKnown RBP8.58□□□□□ -1.04
C9orf3-214ENST00000473778 VKORC1Q9BQB6 163 aa8.58□□□□□ -1.04
C9orf3-214ENST00000473778 PMCHL2Q9BQD1 86 aa8.58□□□□□ -1.04
C9orf3-214ENST00000473778 PSG8Q9UQ74 426 aa8.58□□□□□ -1.04
C9orf3-214ENST00000473778 MUC21A0A0G2JKD1 596 aa8.58□□□□□ -1.04
C9orf3-214ENST00000473778 MUC21A0A140T8X8 626 aa8.58□□□□□ -1.04
C9orf3-214ENST00000473778 NBR2O15453 112 aa8.58□□□□□ -1.04
C9orf3-214ENST00000473778 GOSR1O95249 250 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 106 ms