RNA–Protein interactions for RNA: ENST00000462815.5

PTPN7-204, Transcript of protein tyrosine phosphatase, non-receptor type 7, human

TSL 2

Gene PTPN7, Length 1,147 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN7-204	ENST00000462815	SLC45A2	Q9UMX9	530 aa		7.8	□□□□□ -1.16
PTPN7-204	ENST00000462815	MYCBP2	O75592	4640 aa		7.8	□□□□□ -1.16
PTPN7-204	ENST00000462815	C5orf51	A6NDU8	294 aa		7.79	□□□□□ -1.16
PTPN7-204	ENST00000462815	FAM25E	A8MYX2	175 aa		7.79	□□□□□ -1.16
PTPN7-204	ENST00000462815	MEOX2	P50222	304 aa		7.79	□□□□□ -1.16
PTPN7-204	ENST00000462815	ID3	Q02535	119 aa		7.79	□□□□□ -1.16
PTPN7-204	ENST00000462815	SPINK13	Q1W4C9	94 aa		7.79	□□□□□ -1.16
PTPN7-204	ENST00000462815	IAH1	Q2TAA2	248 aa	Predicted RBP	7.79	□□□□□ -1.16
PTPN7-204	ENST00000462815	SAMD13	Q5VXD3	122 aa		7.79	□□□□□ -1.16
PTPN7-204	ENST00000462815	IGFL4	Q6B9Z1	124 aa		7.79	□□□□□ -1.16
PTPN7-204	ENST00000462815	ST6GAL2	Q96JF0	529 aa		7.79	□□□□□ -1.16
PTPN7-204	ENST00000462815	C16orf92	Q96LL3	132 aa		7.79	□□□□□ -1.16
PTPN7-204	ENST00000462815	NMES1	Q9C002	83 aa		7.79	□□□□□ -1.16
PTPN7-204	ENST00000462815	MAGT1	Q9H0U3	335 aa		7.79	□□□□□ -1.16
PTPN7-204	ENST00000462815	LINC00588	Q9Y4M8	146 aa		7.79	□□□□□ -1.16
PTPN7-204	ENST00000462815	GATA2	P23769	480 aa	Predicted RBP	7.78	□□□□□ -1.16
PTPN7-204	ENST00000462815	BAP18	Q8IXM2	172 aa		7.78	□□□□□ -1.16
PTPN7-204	ENST00000462815		Q8N1X5	172 aa		7.78	□□□□□ -1.16
PTPN7-204	ENST00000462815	RSG1	Q9BU20	258 aa		7.78	□□□□□ -1.16
PTPN7-204	ENST00000462815		G3V3Q6	166 aa		7.77	□□□□□ -1.17
PTPN7-204	ENST00000462815	INS	P01308	110 aa		7.77	□□□□□ -1.17
PTPN7-204	ENST00000462815	MBP	P02686	304 aa	Predicted RBP	7.77	□□□□□ -1.17
PTPN7-204	ENST00000462815	FABP1	P07148	127 aa		7.77	□□□□□ -1.17
PTPN7-204	ENST00000462815	GIP	P09681	153 aa	Predicted RBP	7.77	□□□□□ -1.17
PTPN7-204	ENST00000462815	IAPP	P10997	89 aa		7.77	□□□□□ -1.17
PTPN7-204	ENST00000462815	GALR1	P47211	349 aa		7.77	□□□□□ -1.17
PTPN7-204	ENST00000462815		Q5BKY6	102 aa		7.77	□□□□□ -1.17
PTPN7-204	ENST00000462815	RNF182	Q8N6D2	247 aa		7.77	□□□□□ -1.17
PTPN7-204	ENST00000462815	OR1S1	Q8NH92	325 aa		7.77	□□□□□ -1.17
PTPN7-204	ENST00000462815	RNF141	Q8WVD5	230 aa		7.77	□□□□□ -1.17
PTPN7-204	ENST00000462815	ASB13	Q8WXK3	278 aa		7.77	□□□□□ -1.17
PTPN7-204	ENST00000462815	C11orf1	Q9H5F2	150 aa		7.77	□□□□□ -1.17
PTPN7-204	ENST00000462815	SLC25A22	Q9H936	323 aa		7.77	□□□□□ -1.17
PTPN7-204	ENST00000462815	GSKIP	Q9P0R6	139 aa		7.77	□□□□□ -1.17
PTPN7-204	ENST00000462815	TRAV12-2	A0A075B6T6	113 aa		7.76	□□□□□ -1.17
PTPN7-204	ENST00000462815		H0YIZ8	118 aa		7.76	□□□□□ -1.17
PTPN7-204	ENST00000462815		H3BRN7	92 aa		7.76	□□□□□ -1.17
PTPN7-204	ENST00000462815	DUSP14	O95147	198 aa	Known RBP	7.76	□□□□□ -1.17
PTPN7-204	ENST00000462815	CFD	P00746	253 aa	Predicted RBP	7.76	□□□□□ -1.17
PTPN7-204	ENST00000462815	DEFB130B	P0DP73	79 aa		7.76	□□□□□ -1.17
PTPN7-204	ENST00000462815	DEFB130A	P0DP74	79 aa		7.76	□□□□□ -1.17
PTPN7-204	ENST00000462815	KRTAP10-2	P60368	255 aa		7.76	□□□□□ -1.17
PTPN7-204	ENST00000462815	RAP2B	P61225	183 aa		7.76	□□□□□ -1.17
PTPN7-204	ENST00000462815	CYCS	P99999	105 aa	Known RBP	7.76	□□□□□ -1.17
PTPN7-204	ENST00000462815	CD300C	Q08708	224 aa		7.76	□□□□□ -1.17
PTPN7-204	ENST00000462815	LINC00612	Q8N6U2	182 aa		7.76	□□□□□ -1.17
PTPN7-204	ENST00000462815	OR1B1	Q8NGR6	318 aa		7.76	□□□□□ -1.17
PTPN7-204	ENST00000462815	PPP1R14B	Q96C90	147 aa		7.76	□□□□□ -1.17
PTPN7-204	ENST00000462815	ATG101	Q9BSB4	218 aa		7.76	□□□□□ -1.17
PTPN7-204	ENST00000462815	TMEM208	Q9BTX3	173 aa		7.76	□□□□□ -1.17
PTPN7-204	ENST00000462815	CBY3	A6NI87	242 aa		7.75	□□□□□ -1.17
PTPN7-204	ENST00000462815		F5H768	121 aa		7.75	□□□□□ -1.17
PTPN7-204	ENST00000462815	BOLA2-SMG1P6	H3BVE0	249 aa		7.75	□□□□□ -1.17
PTPN7-204	ENST00000462815		K7EPK0	472 aa		7.75	□□□□□ -1.17
PTPN7-204	ENST00000462815	MRPS12	O15235	138 aa	Known RBP	7.75	□□□□□ -1.17
PTPN7-204	ENST00000462815	CCNK	O75909	580 aa		7.75	□□□□□ -1.17
PTPN7-204	ENST00000462815	MPC2	O95563	127 aa		7.75	□□□□□ -1.17
PTPN7-204	ENST00000462815	B2M	P61769	119 aa		7.75	□□□□□ -1.17
PTPN7-204	ENST00000462815	POLR2G	P62487	172 aa	Known RBP eCLIP	7.75	□□□□□ -1.17
PTPN7-204	ENST00000462815	RAB32	Q13637	225 aa		7.75	□□□□□ -1.17
PTPN7-204	ENST00000462815	RNASE8	Q8TDE3	154 aa	Known RBP	7.75	□□□□□ -1.17
PTPN7-204	ENST00000462815	PPP1R1C	Q8WVI7	109 aa		7.75	□□□□□ -1.17
PTPN7-204	ENST00000462815	GPR82	Q96P67	336 aa		7.75	□□□□□ -1.17
PTPN7-204	ENST00000462815	SLC25A39	Q9BZJ4	359 aa	Predicted RBP	7.75	□□□□□ -1.17
PTPN7-204	ENST00000462815	SCRT2	Q9NQ03	307 aa		7.75	□□□□□ -1.17
PTPN7-204	ENST00000462815	RCL1	Q9Y2P8	373 aa	Known RBP	7.75	□□□□□ -1.17
PTPN7-204	ENST00000462815		A0A087X0K7	114 aa		7.74	□□□□□ -1.17
PTPN7-204	ENST00000462815	PMS2P5	A8MQ11	134 aa		7.74	□□□□□ -1.17
PTPN7-204	ENST00000462815	SMLR1	H3BR10	107 aa		7.74	□□□□□ -1.17
PTPN7-204	ENST00000462815	SYNGR2	O43760	224 aa		7.74	□□□□□ -1.17
PTPN7-204	ENST00000462815	NUDT3	O95989	172 aa		7.74	□□□□□ -1.17
PTPN7-204	ENST00000462815	ATP5G1	P05496	136 aa		7.74	□□□□□ -1.17
PTPN7-204	ENST00000462815	ORM2	P19652	201 aa		7.74	□□□□□ -1.17
PTPN7-204	ENST00000462815	ATP5G3	P48201	142 aa		7.74	□□□□□ -1.17
PTPN7-204	ENST00000462815	PLP1	P60201	277 aa		7.74	□□□□□ -1.17
PTPN7-204	ENST00000462815	RAB11A	P62491	216 aa		7.74	□□□□□ -1.17
PTPN7-204	ENST00000462815	ACOT7L	Q6ZUV0	252 aa		7.74	□□□□□ -1.17
PTPN7-204	ENST00000462815	SPATA12	Q7Z6I5	190 aa		7.74	□□□□□ -1.17
PTPN7-204	ENST00000462815	AKAP14	Q86UN6	197 aa		7.74	□□□□□ -1.17
PTPN7-204	ENST00000462815	TCTE3	Q8IZS6	198 aa		7.74	□□□□□ -1.17
PTPN7-204	ENST00000462815	SHANK2-AS3	Q9BTD1	123 aa		7.74	□□□□□ -1.17
PTPN7-204	ENST00000462815	MED6	O75586	246 aa		7.73	□□□□□ -1.17
PTPN7-204	ENST00000462815	SCGB1D2	O95969	90 aa		7.73	□□□□□ -1.17
PTPN7-204	ENST00000462815	PRB4	P10163	310 aa	Predicted RBP	7.73	□□□□□ -1.17
PTPN7-204	ENST00000462815	CCL18	P55774	89 aa		7.73	□□□□□ -1.17
PTPN7-204	ENST00000462815	TAS2R60	P59551	318 aa		7.73	□□□□□ -1.17
PTPN7-204	ENST00000462815	KIR3DS1	Q14943	382 aa		7.73	□□□□□ -1.17
PTPN7-204	ENST00000462815	SSX7	Q7RTT5	188 aa		7.73	□□□□□ -1.17
PTPN7-204	ENST00000462815	TMEM256	Q8N2U0	113 aa		7.73	□□□□□ -1.17
PTPN7-204	ENST00000462815	BPIFC	Q8NFQ6	507 aa		7.73	□□□□□ -1.17
PTPN7-204	ENST00000462815	OR8A1	Q8NGG7	326 aa		7.73	□□□□□ -1.17
PTPN7-204	ENST00000462815	OR2T35	Q8NGX2	323 aa		7.73	□□□□□ -1.17
PTPN7-204	ENST00000462815	C16orf74	Q96GX8	76 aa		7.73	□□□□□ -1.17
PTPN7-204	ENST00000462815	SMIM8	Q96KF7	97 aa		7.73	□□□□□ -1.17
PTPN7-204	ENST00000462815	UPK3B	Q9BT76	320 aa		7.73	□□□□□ -1.17
PTPN7-204	ENST00000462815		Q9H3A6	140 aa		7.73	□□□□□ -1.17
PTPN7-204	ENST00000462815	OR5AC2	Q9NZP5	309 aa		7.73	□□□□□ -1.17
PTPN7-204	ENST00000462815	LSM5	Q9Y4Y9	91 aa	Known RBP	7.73	□□□□□ -1.17
PTPN7-204	ENST00000462815		H3BP45	60 aa		7.72	□□□□□ -1.17
PTPN7-204	ENST00000462815	WRB	O00258	174 aa		7.72	□□□□□ -1.17

Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms