RNA–Protein interactions for RNA: ENST00000457924.2

UPF3AP2-201, Transcript of UPF3A pseudogene 2, humanhuman

BASIC

Gene UPF3AP2, Length 1,132 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP2-201ENST00000457924 SRPXP78539 464 aa9.93□□□□□ -0.82
UPF3AP2-201ENST00000457924 CLVS1Q8IUQ0 354 aaPredicted RBP9.93□□□□□ -0.82
UPF3AP2-201ENST00000457924 TMEM263Q8WUH6 116 aaKnown RBP9.93□□□□□ -0.82
UPF3AP2-201ENST00000457924 PTTG2Q9NZH5 202 aa9.93□□□□□ -0.82
UPF3AP2-201ENST00000457924 DMBT1Q9UGM3 2413 aaPredicted RBP9.92□□□□□ -0.82
UPF3AP2-201ENST00000457924 PIGBOS1A0A0B4J2F0 54 aa9.92□□□□□ -0.82
UPF3AP2-201ENST00000457924 A0A0J9YY99 117 aa9.92□□□□□ -0.82
UPF3AP2-201ENST00000457924 GATA2P23769 480 aaPredicted RBP9.92□□□□□ -0.82
UPF3AP2-201ENST00000457924 RPP30P78346 268 aaKnown RBP9.92□□□□□ -0.82
UPF3AP2-201ENST00000457924 ESRGQ1W209 222 aa9.92□□□□□ -0.82
UPF3AP2-201ENST00000457924 OR8A1Q8NGG7 326 aa9.92□□□□□ -0.82
UPF3AP2-201ENST00000457924 RNASE8Q8TDE3 154 aaKnown RBP9.92□□□□□ -0.82
UPF3AP2-201ENST00000457924 SMIM4Q8WVI0 70 aa9.92□□□□□ -0.82
UPF3AP2-201ENST00000457924 ZNF586Q9NXT0 402 aa9.92□□□□□ -0.82
UPF3AP2-201ENST00000457924 SCP2D1Q9UJQ7 156 aa9.92□□□□□ -0.82
UPF3AP2-201ENST00000457924 MRPS16Q9Y3D3 137 aaKnown RBP9.92□□□□□ -0.82
UPF3AP2-201ENST00000457924 ZNF701M0R085 212 aaPredicted RBP9.91□□□□□ -0.82
UPF3AP2-201ENST00000457924 RGS5O15539 181 aa9.91□□□□□ -0.82
UPF3AP2-201ENST00000457924 MED6O75586 246 aa9.91□□□□□ -0.82
UPF3AP2-201ENST00000457924 RPL7P18124 248 aaKnown RBP9.91□□□□□ -0.82
UPF3AP2-201ENST00000457924 CDKN1BP46527 198 aa9.91□□□□□ -0.82
UPF3AP2-201ENST00000457924 AKR1C1Q04828 323 aa9.91□□□□□ -0.82
UPF3AP2-201ENST00000457924 TMEM182Q6ZP80 229 aaPredicted RBP9.91□□□□□ -0.82
UPF3AP2-201ENST00000457924 H3BNG1 76 aa9.9□□□□□ -0.82
UPF3AP2-201ENST00000457924 H3BRN7 92 aa9.9□□□□□ -0.82
UPF3AP2-201ENST00000457924 H7BYZ3 331 aa9.9□□□□□ -0.82
UPF3AP2-201ENST00000457924 PITX3O75364 302 aa9.9□□□□□ -0.82
UPF3AP2-201ENST00000457924 CXCL3P19876 107 aa9.9□□□□□ -0.82
UPF3AP2-201ENST00000457924 RAP2BP61225 183 aa9.9□□□□□ -0.82
UPF3AP2-201ENST00000457924 PSG3Q16557 428 aa9.9□□□□□ -0.82
UPF3AP2-201ENST00000457924 CCDC28AQ8IWP9 274 aa9.9□□□□□ -0.82
UPF3AP2-201ENST00000457924 LYPD1Q8N2G4 141 aa9.9□□□□□ -0.82
UPF3AP2-201ENST00000457924 LRRC20Q8TCA0 184 aa9.9□□□□□ -0.82
UPF3AP2-201ENST00000457924 CIB3Q96Q77 187 aaPredicted RBP9.9□□□□□ -0.82
UPF3AP2-201ENST00000457924 MIXL1Q9H2W2 232 aa9.9□□□□□ -0.82
UPF3AP2-201ENST00000457924 DUXBA0A1W2PPF3 345 aa9.89□□□□□ -0.83
UPF3AP2-201ENST00000457924 PRSS46E5RG02 174 aa9.89□□□□□ -0.83
UPF3AP2-201ENST00000457924 CTDSPLO15194 276 aa9.89□□□□□ -0.83
UPF3AP2-201ENST00000457924 RLN2P04090 185 aa9.89□□□□□ -0.83
UPF3AP2-201ENST00000457924 HOXA5P20719 270 aa9.89□□□□□ -0.83
UPF3AP2-201ENST00000457924 LINC00315P59091 139 aa9.89□□□□□ -0.83
UPF3AP2-201ENST00000457924 IL18Q14116 193 aa9.89□□□□□ -0.83
UPF3AP2-201ENST00000457924 CTF1Q16619 201 aa9.89□□□□□ -0.83
UPF3AP2-201ENST00000457924 LINC00612Q8N6U2 182 aa9.89□□□□□ -0.83
UPF3AP2-201ENST00000457924 C20orf144Q9BQM9 153 aa9.89□□□□□ -0.83
UPF3AP2-201ENST00000457924 SHANK2-AS3Q9BTD1 123 aa9.89□□□□□ -0.83
UPF3AP2-201ENST00000457924 NAA50Q9GZZ1 169 aaKnown RBP9.89□□□□□ -0.83
UPF3AP2-201ENST00000457924 MCUBQ9NWR8 336 aa9.89□□□□□ -0.83
UPF3AP2-201ENST00000457924 HIGD1AQ9Y241 93 aa9.89□□□□□ -0.83
UPF3AP2-201ENST00000457924 GAGE12BA1L429 117 aa9.88□□□□□ -0.83
UPF3AP2-201ENST00000457924 GAGE7O76087 117 aa9.88□□□□□ -0.83
UPF3AP2-201ENST00000457924 IL5P05113 134 aa9.88□□□□□ -0.83
UPF3AP2-201ENST00000457924 GAGE12FP0CL80 117 aa9.88□□□□□ -0.83
UPF3AP2-201ENST00000457924 GAGE12GP0CL81 117 aa9.88□□□□□ -0.83
UPF3AP2-201ENST00000457924 GAGE12IP0CL82 117 aa9.88□□□□□ -0.83
UPF3AP2-201ENST00000457924 FRZBQ92765 325 aa9.88□□□□□ -0.83
UPF3AP2-201ENST00000457924 RABL2AQ9UBK7 228 aaPredicted RBP9.88□□□□□ -0.83
UPF3AP2-201ENST00000457924 RABL2BQ9UNT1 228 aa9.88□□□□□ -0.83
UPF3AP2-201ENST00000457924 A0A087X0K7 114 aa9.87□□□□□ -0.83
UPF3AP2-201ENST00000457924 ANKRD20A5PA0PJZ0 165 aa9.87□□□□□ -0.83
UPF3AP2-201ENST00000457924 SNURFLB1AK76 121 aa9.87□□□□□ -0.83
UPF3AP2-201ENST00000457924 WRBO00258 174 aa9.87□□□□□ -0.83
UPF3AP2-201ENST00000457924 CTDSP2O14595 271 aa9.87□□□□□ -0.83
UPF3AP2-201ENST00000457924 SYNGR2O43760 224 aa9.87□□□□□ -0.83
UPF3AP2-201ENST00000457924 HYPMO75409 117 aa9.87□□□□□ -0.83
UPF3AP2-201ENST00000457924 OR5G3P0C626 314 aa9.87□□□□□ -0.83
UPF3AP2-201ENST00000457924 SLC25A6P12236 298 aa9.87□□□□□ -0.83
UPF3AP2-201ENST00000457924 ERVFC1-1P60608 527 aa9.87□□□□□ -0.83
UPF3AP2-201ENST00000457924 SPANXN5Q5MJ07 72 aa9.87□□□□□ -0.83
UPF3AP2-201ENST00000457924 Q5VSD8 79 aa9.87□□□□□ -0.83
UPF3AP2-201ENST00000457924 CYP2G1PQ6ZSU1 146 aa9.87□□□□□ -0.83
UPF3AP2-201ENST00000457924 S100A7AQ86SG5 101 aa9.87□□□□□ -0.83
UPF3AP2-201ENST00000457924 RPUSD4Q96CM3 377 aaKnown RBP9.87□□□□□ -0.83
UPF3AP2-201ENST00000457924 SMCO3A2RU48 225 aa9.86□□□□□ -0.83
UPF3AP2-201ENST00000457924 PRB4P10163 310 aaPredicted RBP9.86□□□□□ -0.83
UPF3AP2-201ENST00000457924 XGP55808 180 aa9.86□□□□□ -0.83
UPF3AP2-201ENST00000457924 Q6ZRN7 208 aaPredicted RBP9.86□□□□□ -0.83
UPF3AP2-201ENST00000457924 ACOT7LQ6ZUV0 252 aa9.86□□□□□ -0.83
UPF3AP2-201ENST00000457924 DIRAS2Q96HU8 199 aa9.86□□□□□ -0.83
UPF3AP2-201ENST00000457924 SIVA1O15304 175 aa9.85□□□□□ -0.83
UPF3AP2-201ENST00000457924 LINC00869P0C866 280 aa9.85□□□□□ -0.83
UPF3AP2-201ENST00000457924 ANXA7P20073 488 aaKnown RBP9.85□□□□□ -0.83
UPF3AP2-201ENST00000457924 FUSP35637 526 aaKnown RBP eCLIP9.85□□□□□ -0.83
UPF3AP2-201ENST00000457924 PLP1P60201 277 aa9.85□□□□□ -0.83
UPF3AP2-201ENST00000457924 TMED4Q7Z7H5 227 aa9.85□□□□□ -0.83
UPF3AP2-201ENST00000457924 RNF24Q9Y225 148 aa9.85□□□□□ -0.83
UPF3AP2-201ENST00000457924 STRAPQ9Y3F4 350 aaKnown RBP9.85□□□□□ -0.83
UPF3AP2-201ENST00000457924 H3BP45 60 aa9.84□□□□□ -0.83
UPF3AP2-201ENST00000457924 IFNA5P01569 189 aa9.84□□□□□ -0.83
UPF3AP2-201ENST00000457924 SELENOTP62341 195 aa9.84□□□□□ -0.83
UPF3AP2-201ENST00000457924 TMEM128Q5BJH2 165 aa9.84□□□□□ -0.83
UPF3AP2-201ENST00000457924 CCDC190Q86UF4 302 aa9.84□□□□□ -0.83
UPF3AP2-201ENST00000457924 LRTM2Q8N967 370 aa9.84□□□□□ -0.83
UPF3AP2-201ENST00000457924 TMPRSS5Q9H3S3 457 aa9.84□□□□□ -0.83
UPF3AP2-201ENST00000457924 A0A096LPF7 62 aa9.83□□□□□ -0.84
UPF3AP2-201ENST00000457924 CXCL2P19875 107 aa9.83□□□□□ -0.84
UPF3AP2-201ENST00000457924 LCE3BQ5TA77 95 aa9.83□□□□□ -0.84
UPF3AP2-201ENST00000457924 GFI1BQ5VTD9 330 aa9.83□□□□□ -0.84
UPF3AP2-201ENST00000457924 LCN15Q6UWW0 184 aa9.83□□□□□ -0.84
UPF3AP2-201ENST00000457924 VSIG2Q96IQ7 327 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 98.6 ms