RNA–Protein interactions for RNA: ENST00000456948.5

CBX3-204, Transcript of chromobox 3, humanhuman

TSL 5

Gene CBX3, Length 1,068 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-204ENST00000456948 RNF126Q9BV68 326 aa16.85■□□□□ 0.29
CBX3-204ENST00000456948 PPP1R14DQ9NXH3 145 aa16.85■□□□□ 0.29
CBX3-204ENST00000456948 TRAV8-2A0A0B4J237 113 aa16.84■□□□□ 0.29
CBX3-204ENST00000456948 F6UB75 175 aa16.84■□□□□ 0.29
CBX3-204ENST00000456948 IFNA5P01569 189 aa16.84■□□□□ 0.29
CBX3-204ENST00000456948 AMBPP02760 352 aa16.84■□□□□ 0.29
CBX3-204ENST00000456948 RPL12P30050 165 aaKnown RBP16.84■□□□□ 0.29
CBX3-204ENST00000456948 DEFB1P60022 68 aa16.84■□□□□ 0.29
CBX3-204ENST00000456948 PSG3Q16557 428 aa16.84■□□□□ 0.29
CBX3-204ENST00000456948 SCGB1C1Q8TD33 95 aa16.84■□□□□ 0.29
CBX3-204ENST00000456948 HRH4Q9H3N8 390 aa16.84■□□□□ 0.29
CBX3-204ENST00000456948 GOLT1BQ9Y3E0 138 aa16.84■□□□□ 0.29
CBX3-204ENST00000456948 CXCL3P19876 107 aa16.83■□□□□ 0.28
CBX3-204ENST00000456948 RGS21Q2M5E4 152 aa16.83■□□□□ 0.28
CBX3-204ENST00000456948 IGFL4Q6B9Z1 124 aa16.83■□□□□ 0.28
CBX3-204ENST00000456948 RNF182Q8N6D2 247 aa16.83■□□□□ 0.28
CBX3-204ENST00000456948 ATP5SQ99766 215 aa16.83■□□□□ 0.28
CBX3-204ENST00000456948 WDR61Q9GZS3 305 aaKnown RBP16.83■□□□□ 0.28
CBX3-204ENST00000456948 HSPB11Q9Y547 144 aa16.83■□□□□ 0.28
CBX3-204ENST00000456948 IGHV4-28A0A0C4DH34 117 aa16.82■□□□□ 0.28
CBX3-204ENST00000456948 SMIM9A6NGZ8 99 aa16.82■□□□□ 0.28
CBX3-204ENST00000456948 MRPS12O15235 138 aaKnown RBP16.82■□□□□ 0.28
CBX3-204ENST00000456948 FXYD7P58549 80 aa16.82■□□□□ 0.28
CBX3-204ENST00000456948 Q8NAQ8 132 aa16.82■□□□□ 0.28
CBX3-204ENST00000456948 MBD2Q9UBB5 411 aa16.82■□□□□ 0.28
CBX3-204ENST00000456948 TENM2Q9NT68 2774 aa16.81■□□□□ 0.28
CBX3-204ENST00000456948 DEFB4AO15263 64 aa16.81■□□□□ 0.28
CBX3-204ENST00000456948 CNN1P51911 297 aaKnown RBP16.81■□□□□ 0.28
CBX3-204ENST00000456948 CEMP1Q6PRD7 247 aaPredicted RBP16.81■□□□□ 0.28
CBX3-204ENST00000456948 ASB13Q8WXK3 278 aa16.81■□□□□ 0.28
CBX3-204ENST00000456948 ZNF331Q9NQX6 463 aaPredicted RBP16.81■□□□□ 0.28
CBX3-204ENST00000456948 X6R8D5 127 aa16.81■□□□□ 0.28
CBX3-204ENST00000456948 RHOBP62745 196 aa16.8■□□□□ 0.28
CBX3-204ENST00000456948 RPUSD4Q96CM3 377 aaKnown RBP16.8■□□□□ 0.28
CBX3-204ENST00000456948 NEU1Q99519 415 aa16.8■□□□□ 0.28
CBX3-204ENST00000456948 SLC35B3Q9H1N7 401 aa16.8■□□□□ 0.28
CBX3-204ENST00000456948 CSMD3Q7Z407 3707 aa16.8■□□□□ 0.28
CBX3-204ENST00000456948 IGHV3OR16-12A0A075B7B8 117 aa16.79■□□□□ 0.28
CBX3-204ENST00000456948 LCE6AA0A183 80 aa16.79■□□□□ 0.28
CBX3-204ENST00000456948 TMEM189A5PLL7 270 aa16.79■□□□□ 0.28
CBX3-204ENST00000456948 IGLC2P0DOY2 106 aa16.79■□□□□ 0.28
CBX3-204ENST00000456948 HIST1H1AQ02539 215 aaPredicted RBP16.79■□□□□ 0.28
CBX3-204ENST00000456948 MORN5Q5VZ52 161 aa16.79■□□□□ 0.28
CBX3-204ENST00000456948 OR8A1Q8NGG7 326 aa16.79■□□□□ 0.28
CBX3-204ENST00000456948 PHLDA1Q8WV24 401 aaPredicted RBP16.79■□□□□ 0.28
CBX3-204ENST00000456948 TMEM208Q9BTX3 173 aa16.79■□□□□ 0.28
CBX3-204ENST00000456948 TMEM14CQ9P0S9 112 aa16.79■□□□□ 0.28
CBX3-204ENST00000456948 TRAV5A0A0B4J249 113 aa16.78■□□□□ 0.28
CBX3-204ENST00000456948 A8MTW9 85 aa16.78■□□□□ 0.28
CBX3-204ENST00000456948 ZNF705AQ6ZN79 300 aaPredicted RBP16.78■□□□□ 0.28
CBX3-204ENST00000456948 DYNC2H1Q8NCM8 4307 aaKnown RBP16.77■□□□□ 0.28
CBX3-204ENST00000456948 ZNF253O75346 499 aa16.77■□□□□ 0.28
CBX3-204ENST00000456948 RBMY1A1P0DJD3 496 aaKnown RBP16.77■□□□□ 0.28
CBX3-204ENST00000456948 RBMY1CP0DJD4 496 aa16.77■□□□□ 0.28
CBX3-204ENST00000456948 NANOS2P60321 138 aaKnown RBP16.77■□□□□ 0.28
CBX3-204ENST00000456948 RBMY1FQ15415 496 aaKnown RBP16.77■□□□□ 0.28
CBX3-204ENST00000456948 FCN2Q15485 313 aa16.77■□□□□ 0.28
CBX3-204ENST00000456948 OR10J6PQ8NGY7 276 aa16.77■□□□□ 0.28
CBX3-204ENST00000456948 IGF2BP2-AS1Q96M15 143 aa16.77■□□□□ 0.28
CBX3-204ENST00000456948 MRPL32Q9BYC8 188 aaKnown RBP16.77■□□□□ 0.28
CBX3-204ENST00000456948 SMIM3Q9BZL3 60 aa16.77■□□□□ 0.28
CBX3-204ENST00000456948 TIMM9Q9Y5J7 89 aa16.77■□□□□ 0.28
CBX3-204ENST00000456948 RFNGQ9Y644 331 aa16.77■□□□□ 0.28
CBX3-204ENST00000456948 STARD9Q9P2P6 4700 aa16.77■□□□□ 0.27
CBX3-204ENST00000456948 C11orf94C9JXX5 98 aa16.76■□□□□ 0.27
CBX3-204ENST00000456948 HBE1P02100 147 aa16.76■□□□□ 0.27
CBX3-204ENST00000456948 SNRPCP09234 159 aaKnown RBP16.76■□□□□ 0.27
CBX3-204ENST00000456948 HIST1H1EP10412 219 aaKnown RBP16.76■□□□□ 0.27
CBX3-204ENST00000456948 OR11H7Q8NGC8 314 aa16.76■□□□□ 0.27
CBX3-204ENST00000456948 ZNF705FA8MVS1 300 aaPredicted RBP16.75■□□□□ 0.27
CBX3-204ENST00000456948 H3BQ15 152 aa16.75■□□□□ 0.27
CBX3-204ENST00000456948 INSP01308 110 aa16.75■□□□□ 0.27
CBX3-204ENST00000456948 ZNF705DP0CH99 300 aaPredicted RBP16.75■□□□□ 0.27
CBX3-204ENST00000456948 ZNF705BP0CI00 300 aaPredicted RBP16.75■□□□□ 0.27
CBX3-204ENST00000456948 HLA-DMBP28068 263 aa16.75■□□□□ 0.27
CBX3-204ENST00000456948 PDE6HQ13956 83 aa16.75■□□□□ 0.27
CBX3-204ENST00000456948 H3BTX0 84 aa16.74■□□□□ 0.27
CBX3-204ENST00000456948 BOLA2-SMG1P6H3BVE0 249 aa16.74■□□□□ 0.27
CBX3-204ENST00000456948 GIPP09681 153 aaPredicted RBP16.74■□□□□ 0.27
CBX3-204ENST00000456948 SPINK13Q1W4C9 94 aa16.74■□□□□ 0.27
CBX3-204ENST00000456948 AMTNQ6UX39 209 aa16.74■□□□□ 0.27
CBX3-204ENST00000456948 SAT2Q96F10 170 aaPredicted RBP16.74■□□□□ 0.27
CBX3-204ENST00000456948 PARD6GQ9BYG4 376 aaPredicted RBP16.74■□□□□ 0.27
CBX3-204ENST00000456948 AAMDCQ9H7C9 122 aa16.74■□□□□ 0.27
CBX3-204ENST00000456948 PRELID1Q9Y255 219 aa16.74■□□□□ 0.27
CBX3-204ENST00000456948 TEX48A0A1B0GUV7 120 aa16.73■□□□□ 0.27
CBX3-204ENST00000456948 TSPOP30536 169 aa16.73■□□□□ 0.27
CBX3-204ENST00000456948 ZNF266Q14584 549 aa16.73■□□□□ 0.27
CBX3-204ENST00000456948 RRN3P1Q2M238 152 aa16.73■□□□□ 0.27
CBX3-204ENST00000456948 GCSAMLQ5JQS6 135 aa16.73■□□□□ 0.27
CBX3-204ENST00000456948 ZNF586Q9NXT0 402 aa16.73■□□□□ 0.27
CBX3-204ENST00000456948 TRBV19A0A075B6N1 114 aa16.72■□□□□ 0.27
CBX3-204ENST00000456948 FFAR4Q5NUL3 377 aa16.72■□□□□ 0.27
CBX3-204ENST00000456948 INO80EQ8NBZ0 244 aaPredicted RBP16.72■□□□□ 0.27
CBX3-204ENST00000456948 C2CD4CQ8TF44 421 aa16.72■□□□□ 0.27
CBX3-204ENST00000456948 MRPL53Q96EL3 112 aaKnown RBP16.72■□□□□ 0.27
CBX3-204ENST00000456948 OR51M1Q9H341 326 aa16.72■□□□□ 0.27
CBX3-204ENST00000456948 FUT9Q9Y231 359 aa16.72■□□□□ 0.27
CBX3-204ENST00000456948 LYSTQ99698 3801 aa16.71■□□□□ 0.27
CBX3-204ENST00000456948 M0R2Z0 102 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms