RNA–Protein interactions for RNA: ENST00000455546.6

GTF3C3-208, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 4

Gene GTF3C3, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-208ENST00000455546 FOXI2Q6ZQN5 318 aa3.32□□□□□ -1.88
GTF3C3-208ENST00000455546 UBE2DNLQ8IWF7 75 aa3.32□□□□□ -1.88
GTF3C3-208ENST00000455546 TOMM5Q8N4H5 51 aa3.32□□□□□ -1.88
GTF3C3-208ENST00000455546 RNF182Q8N6D2 247 aa3.32□□□□□ -1.88
GTF3C3-208ENST00000455546 OR1B1Q8NGR6 318 aa3.32□□□□□ -1.88
GTF3C3-208ENST00000455546 MCFD2Q8NI22 146 aa3.32□□□□□ -1.88
GTF3C3-208ENST00000455546 RAB2BQ8WUD1 216 aa3.32□□□□□ -1.88
GTF3C3-208ENST00000455546 TRGV9Q99603 122 aa3.32□□□□□ -1.88
GTF3C3-208ENST00000455546 NIPSNAP3BQ9BS92 247 aa3.32□□□□□ -1.88
GTF3C3-208ENST00000455546 CCDC59Q9P031 241 aaKnown RBP3.32□□□□□ -1.88
GTF3C3-208ENST00000455546 DOK5Q9P104 306 aa3.32□□□□□ -1.88
GTF3C3-208ENST00000455546 CACFD1Q9UGQ2 172 aa3.32□□□□□ -1.88
GTF3C3-208ENST00000455546 RSL24D1Q9UHA3 163 aaKnown RBP3.32□□□□□ -1.88
GTF3C3-208ENST00000455546 YTHDF2Q9Y5A9 579 aaKnown RBP3.32□□□□□ -1.88
GTF3C3-208ENST00000455546 RFNGQ9Y644 331 aa3.32□□□□□ -1.88
GTF3C3-208ENST00000455546 DNAH10Q8IVF4 4471 aa3.32□□□□□ -1.88
GTF3C3-208ENST00000455546 TRAV12-2A0A075B6T6 113 aa3.31□□□□□ -1.88
GTF3C3-208ENST00000455546 TRAV8-2A0A0B4J237 113 aa3.31□□□□□ -1.88
GTF3C3-208ENST00000455546 LINC00854A0A1B0GVQ3 168 aa3.31□□□□□ -1.88
GTF3C3-208ENST00000455546 PRSS46E5RG02 174 aa3.31□□□□□ -1.88
GTF3C3-208ENST00000455546 H3BP45 60 aa3.31□□□□□ -1.88
GTF3C3-208ENST00000455546 M0R2Z0 102 aa3.31□□□□□ -1.88
GTF3C3-208ENST00000455546 ISLRO14498 428 aa3.31□□□□□ -1.88
GTF3C3-208ENST00000455546 SYNGR2O43760 224 aa3.31□□□□□ -1.88
GTF3C3-208ENST00000455546 ADAP1O75689 374 aa3.31□□□□□ -1.88
GTF3C3-208ENST00000455546 SCGB1D1O95968 90 aa3.31□□□□□ -1.88
GTF3C3-208ENST00000455546 HBE1P02100 147 aa3.31□□□□□ -1.88
GTF3C3-208ENST00000455546 AMBPP02760 352 aa3.31□□□□□ -1.88
GTF3C3-208ENST00000455546 HTN1P15515 57 aa3.31□□□□□ -1.88
GTF3C3-208ENST00000455546 AZU1P20160 251 aa3.31□□□□□ -1.88
GTF3C3-208ENST00000455546 CNN1P51911 297 aaKnown RBP3.31□□□□□ -1.88
GTF3C3-208ENST00000455546 PAX9P55771 341 aa3.31□□□□□ -1.88
GTF3C3-208ENST00000455546 POLR2GP62487 172 aaKnown RBP eCLIP3.31□□□□□ -1.88
GTF3C3-208ENST00000455546 SPINK13Q1W4C9 94 aa3.31□□□□□ -1.88
GTF3C3-208ENST00000455546 RRN3P1Q2M238 152 aa3.31□□□□□ -1.88
GTF3C3-208ENST00000455546 C1orf194Q5T5A4 169 aa3.31□□□□□ -1.88
GTF3C3-208ENST00000455546 C10orf25Q5T742 122 aa3.31□□□□□ -1.88
GTF3C3-208ENST00000455546 GGNBP1Q5YKI7 109 aa3.31□□□□□ -1.88
GTF3C3-208ENST00000455546 OR8G2PQ6IF36 304 aa3.31□□□□□ -1.88
GTF3C3-208ENST00000455546 AMTNQ6UX39 209 aa3.31□□□□□ -1.88
GTF3C3-208ENST00000455546 LINC00336Q6ZUF6 198 aa3.31□□□□□ -1.88
GTF3C3-208ENST00000455546 THAP8Q8NA92 274 aa3.31□□□□□ -1.88
GTF3C3-208ENST00000455546 OR11H7Q8NGC8 314 aa3.31□□□□□ -1.88
GTF3C3-208ENST00000455546 TMEM208Q9BTX3 173 aa3.31□□□□□ -1.88
GTF3C3-208ENST00000455546 SLC25A39Q9BZJ4 359 aaPredicted RBP3.31□□□□□ -1.88
GTF3C3-208ENST00000455546 RPRMQ9NS64 109 aa3.31□□□□□ -1.88
GTF3C3-208ENST00000455546 RABL2AQ9UBK7 228 aaPredicted RBP3.31□□□□□ -1.88
GTF3C3-208ENST00000455546 RABL2BQ9UNT1 228 aa3.31□□□□□ -1.88
GTF3C3-208ENST00000455546 FLVCR2Q9UPI3 526 aa3.31□□□□□ -1.88
GTF3C3-208ENST00000455546 GOLT1BQ9Y3E0 138 aa3.31□□□□□ -1.88
GTF3C3-208ENST00000455546 V9GYH0 126 aa3.31□□□□□ -1.88
GTF3C3-208ENST00000455546 C9orf170A2RU37 121 aa3.3□□□□□ -1.88
GTF3C3-208ENST00000455546 SMCO3A2RU48 225 aa3.3□□□□□ -1.88
GTF3C3-208ENST00000455546 TMEM189A5PLL7 270 aa3.3□□□□□ -1.88
GTF3C3-208ENST00000455546 CCDC160A6NGH7 325 aa3.3□□□□□ -1.88
GTF3C3-208ENST00000455546 PMS2P5A8MQ11 134 aa3.3□□□□□ -1.88
GTF3C3-208ENST00000455546 CRXO43186 299 aaPredicted RBP3.3□□□□□ -1.88
GTF3C3-208ENST00000455546 MED6O75586 246 aa3.3□□□□□ -1.88
GTF3C3-208ENST00000455546 IL5P05113 134 aa3.3□□□□□ -1.88
GTF3C3-208ENST00000455546 FABP1P07148 127 aa3.3□□□□□ -1.88
GTF3C3-208ENST00000455546 OR5G3P0C626 314 aa3.3□□□□□ -1.88
GTF3C3-208ENST00000455546 DEFB130BP0DP73 79 aa3.3□□□□□ -1.88
GTF3C3-208ENST00000455546 DEFB130AP0DP74 79 aa3.3□□□□□ -1.88
GTF3C3-208ENST00000455546 SLC25A6P12236 298 aa3.3□□□□□ -1.88
GTF3C3-208ENST00000455546 FAUP35544 74 aaKnown RBP3.3□□□□□ -1.88
GTF3C3-208ENST00000455546 GALR1P47211 349 aa3.3□□□□□ -1.88
GTF3C3-208ENST00000455546 ATP5IP56385 69 aaPredicted RBP3.3□□□□□ -1.88
GTF3C3-208ENST00000455546 DAD1P61803 113 aa3.3□□□□□ -1.88
GTF3C3-208ENST00000455546 RRAS2P62070 204 aaPredicted RBP3.3□□□□□ -1.88
GTF3C3-208ENST00000455546 SRPXP78539 464 aa3.3□□□□□ -1.88
GTF3C3-208ENST00000455546 AKR1C1Q04828 323 aa3.3□□□□□ -1.88
GTF3C3-208ENST00000455546 LGALS9BQ3B8N2 356 aa3.3□□□□□ -1.88
GTF3C3-208ENST00000455546 PATE2Q6UY27 113 aa3.3□□□□□ -1.88
GTF3C3-208ENST00000455546 Q6ZR54 194 aa3.3□□□□□ -1.88
GTF3C3-208ENST00000455546 ZNF575Q86XF7 245 aa3.3□□□□□ -1.88
GTF3C3-208ENST00000455546 BAP18Q8IXM2 172 aa3.3□□□□□ -1.88
GTF3C3-208ENST00000455546 LRTM2Q8N967 370 aa3.3□□□□□ -1.88
GTF3C3-208ENST00000455546 TMEM18Q96B42 140 aa3.3□□□□□ -1.88
GTF3C3-208ENST00000455546 UHRF2Q96PU4 802 aa3.3□□□□□ -1.88
GTF3C3-208ENST00000455546 LINC01587Q99440 93 aa3.3□□□□□ -1.88
GTF3C3-208ENST00000455546 TMEM147Q9BVK8 224 aa3.3□□□□□ -1.88
GTF3C3-208ENST00000455546 KRTAP4-5Q9BYR2 181 aa3.3□□□□□ -1.88
GTF3C3-208ENST00000455546 PSENENQ9NZ42 101 aa3.3□□□□□ -1.88
GTF3C3-208ENST00000455546 STRAPQ9Y3F4 350 aaKnown RBP3.3□□□□□ -1.88
GTF3C3-208ENST00000455546 TMED3Q9Y3Q3 217 aa3.3□□□□□ -1.88
GTF3C3-208ENST00000455546 DNAH6Q9C0G6 4158 aa3.3□□□□□ -1.88
GTF3C3-208ENST00000455546 DUXBA0A1W2PPF3 345 aa3.29□□□□□ -1.88
GTF3C3-208ENST00000455546 PLAC8L1A1L4L8 177 aa3.29□□□□□ -1.88
GTF3C3-208ENST00000455546 F5H768 121 aa3.29□□□□□ -1.88
GTF3C3-208ENST00000455546 H3BRN7 92 aa3.29□□□□□ -1.88
GTF3C3-208ENST00000455546 H3BTX0 84 aa3.29□□□□□ -1.88
GTF3C3-208ENST00000455546 SSSCA1O60232 199 aa3.29□□□□□ -1.88
GTF3C3-208ENST00000455546 PAGE4O60829 102 aa3.29□□□□□ -1.88
GTF3C3-208ENST00000455546 NOL3O60936 208 aaKnown RBP3.29□□□□□ -1.88
GTF3C3-208ENST00000455546 METTL15P1P0C7V9 234 aa3.29□□□□□ -1.88
GTF3C3-208ENST00000455546 ANXA7P20073 488 aaKnown RBP3.29□□□□□ -1.88
GTF3C3-208ENST00000455546 S100A5P33763 92 aa3.29□□□□□ -1.88
GTF3C3-208ENST00000455546 NUP62P37198 522 aaPredicted RBP3.29□□□□□ -1.88
GTF3C3-208ENST00000455546 AP3S2P59780 193 aa3.29□□□□□ -1.88
GTF3C3-208ENST00000455546 UBE2MP61081 183 aaKnown RBP3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 85.3 ms