RNA–Protein interactions for RNA: ENST00000427478.6

CNEP1R1-202, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNEP1R1, Length 2,117 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-202ENST00000427478 TMEM190Q8WZ59 177 aa16.82■□□□□ 0.28
CNEP1R1-202ENST00000427478 S100A8P05109 93 aa16.82■□□□□ 0.28
CNEP1R1-202ENST00000427478 PLA2G2AP14555 144 aa16.82■□□□□ 0.28
CNEP1R1-202ENST00000427478 RELQ04864 619 aaPredicted RBP16.82■□□□□ 0.28
CNEP1R1-202ENST00000427478 LINC00322Q6ZN03 302 aaPredicted RBP16.82■□□□□ 0.28
CNEP1R1-202ENST00000427478 Q71RC1 249 aaPredicted RBP16.82■□□□□ 0.28
CNEP1R1-202ENST00000427478 MBD6Q96DN6 1003 aa16.82■□□□□ 0.28
CNEP1R1-202ENST00000427478 CLPSL1A2RUU4 121 aa16.81■□□□□ 0.28
CNEP1R1-202ENST00000427478 DIRC3C9JPN6 131 aa16.81■□□□□ 0.28
CNEP1R1-202ENST00000427478 IER3P46695 156 aa16.81■□□□□ 0.28
CNEP1R1-202ENST00000427478 HIST3H2BBQ8N257 126 aa16.81■□□□□ 0.28
CNEP1R1-202ENST00000427478 TMEM75Q8N9X5 138 aa16.81■□□□□ 0.28
CNEP1R1-202ENST00000427478 C12orf57Q99622 126 aa16.81■□□□□ 0.28
CNEP1R1-202ENST00000427478 IGHV3-66A0A0C4DH42 116 aa16.81■□□□□ 0.28
CNEP1R1-202ENST00000427478 XKRY2A2RUG3 117 aa16.81■□□□□ 0.28
CNEP1R1-202ENST00000427478 PSG9Q00887 426 aa16.81■□□□□ 0.28
CNEP1R1-202ENST00000427478 KRTAP1-3Q8IUG1 177 aa16.81■□□□□ 0.28
CNEP1R1-202ENST00000427478 TMEM183AQ8IXX5 376 aa16.81■□□□□ 0.28
CNEP1R1-202ENST00000427478 CIARTQ8N365 385 aaPredicted RBP16.81■□□□□ 0.28
CNEP1R1-202ENST00000427478 GRAMD2BQ96HH9 432 aa16.81■□□□□ 0.28
CNEP1R1-202ENST00000427478 K7EQM0 130 aa16.8■□□□□ 0.28
CNEP1R1-202ENST00000427478 ZNF207O43670 478 aaKnown RBP16.8■□□□□ 0.28
CNEP1R1-202ENST00000427478 PF4V1P10720 104 aa16.8■□□□□ 0.28
CNEP1R1-202ENST00000427478 MEOX2P50222 304 aa16.8■□□□□ 0.28
CNEP1R1-202ENST00000427478 ASCL2Q99929 193 aa16.8■□□□□ 0.28
CNEP1R1-202ENST00000427478 GPR61Q9BZJ8 451 aa16.8■□□□□ 0.28
CNEP1R1-202ENST00000427478 CSPG4Q6UVK1 2322 aa16.8■□□□□ 0.28
CNEP1R1-202ENST00000427478 H3BUA1 57 aa16.79■□□□□ 0.28
CNEP1R1-202ENST00000427478 BUB3O43684 328 aa16.79■□□□□ 0.28
CNEP1R1-202ENST00000427478 ATP6V0BQ99437 205 aa16.79■□□□□ 0.28
CNEP1R1-202ENST00000427478 KLK15Q9H2R5 256 aa16.79■□□□□ 0.28
CNEP1R1-202ENST00000427478 ABCA12Q86UK0 2595 aa16.79■□□□□ 0.28
CNEP1R1-202ENST00000427478 IGHV3OR16-13A0A075B7E8 117 aa16.79■□□□□ 0.28
CNEP1R1-202ENST00000427478 IGHV3-74A0A0B4J1X5 117 aa16.79■□□□□ 0.28
CNEP1R1-202ENST00000427478 FSHBP01225 129 aa16.79■□□□□ 0.28
CNEP1R1-202ENST00000427478 ARL3P36405 182 aa16.79■□□□□ 0.28
CNEP1R1-202ENST00000427478 TMEM95Q3KNT9 176 aa16.79■□□□□ 0.28
CNEP1R1-202ENST00000427478 TRBV6-1A0A0K0K1D8 114 aa16.78■□□□□ 0.28
CNEP1R1-202ENST00000427478 SNURFLB1AK76 121 aa16.78■□□□□ 0.28
CNEP1R1-202ENST00000427478 TRBV12-3P01733 135 aa16.78■□□□□ 0.28
CNEP1R1-202ENST00000427478 APOHP02749 345 aaPredicted RBP16.78■□□□□ 0.28
CNEP1R1-202ENST00000427478 PSG3Q16557 428 aa16.78■□□□□ 0.28
CNEP1R1-202ENST00000427478 MRPL54Q6P161 138 aaKnown RBP16.78■□□□□ 0.28
CNEP1R1-202ENST00000427478 LCNL1Q6ZST4 164 aa16.78■□□□□ 0.28
CNEP1R1-202ENST00000427478 METTL26Q96S19 204 aa16.78■□□□□ 0.28
CNEP1R1-202ENST00000427478 MRPL18Q9H0U6 180 aaKnown RBP16.78■□□□□ 0.28
CNEP1R1-202ENST00000427478 ZNF492Q9P255 531 aa16.78■□□□□ 0.28
CNEP1R1-202ENST00000427478 PSG8Q9UQ74 426 aa16.78■□□□□ 0.28
CNEP1R1-202ENST00000427478 KMT2BQ9UMN6 2715 aaPredicted RBP16.78■□□□□ 0.28
CNEP1R1-202ENST00000427478 IGHV3-49A0A0A0MS15 119 aa16.78■□□□□ 0.28
CNEP1R1-202ENST00000427478 IZUMO1RA6ND01 250 aa16.78■□□□□ 0.28
CNEP1R1-202ENST00000427478 J3QKU1 62 aa16.78■□□□□ 0.28
CNEP1R1-202ENST00000427478 IGHV3-11P01762 117 aa16.78■□□□□ 0.28
CNEP1R1-202ENST00000427478 RAB9AP51151 201 aa16.78■□□□□ 0.28
CNEP1R1-202ENST00000427478 RPL19P84098 196 aaKnown RBP16.78■□□□□ 0.28
CNEP1R1-202ENST00000427478 C19orf71A6NCJ1 209 aa16.77■□□□□ 0.28
CNEP1R1-202ENST00000427478 BRI3O95415 125 aa16.77■□□□□ 0.28
CNEP1R1-202ENST00000427478 CSN1S1P47710 185 aa16.77■□□□□ 0.28
CNEP1R1-202ENST00000427478 IGFL4Q6B9Z1 124 aa16.77■□□□□ 0.28
CNEP1R1-202ENST00000427478 RPP21Q9H633 154 aaKnown RBP16.77■□□□□ 0.28
CNEP1R1-202ENST00000427478 TENM4Q6N022 2769 aa16.77■□□□□ 0.28
CNEP1R1-202ENST00000427478 ZNF785A8K8V0 405 aa16.76■□□□□ 0.27
CNEP1R1-202ENST00000427478 P01737 135 aa16.76■□□□□ 0.27
CNEP1R1-202ENST00000427478 TSKUQ8WUA8 353 aa16.76■□□□□ 0.27
CNEP1R1-202ENST00000427478 USMG5Q96IX5 58 aa16.76■□□□□ 0.27
CNEP1R1-202ENST00000427478 DOPEY2Q9Y3R5 2298 aa16.76■□□□□ 0.27
CNEP1R1-202ENST00000427478 HLA-DMBP28068 263 aa16.76■□□□□ 0.27
CNEP1R1-202ENST00000427478 DAZAP1Q96EP5 407 aaKnown RBP16.76■□□□□ 0.27
CNEP1R1-202ENST00000427478 NEU1Q99519 415 aa16.76■□□□□ 0.27
CNEP1R1-202ENST00000427478 PRRC2AP48634 2157 aaKnown RBP16.75■□□□□ 0.27
CNEP1R1-202ENST00000427478 IGLV1-40P01703 118 aa16.75■□□□□ 0.27
CNEP1R1-202ENST00000427478 S100A2P29034 98 aa16.75■□□□□ 0.27
CNEP1R1-202ENST00000427478 CFHR3Q02985 330 aa16.75■□□□□ 0.27
CNEP1R1-202ENST00000427478 PRSS57Q6UWY2 283 aa16.75■□□□□ 0.27
CNEP1R1-202ENST00000427478 GBGT1Q8N5D6 347 aa16.75■□□□□ 0.27
CNEP1R1-202ENST00000427478 NUP35Q8NFH5 326 aa16.75■□□□□ 0.27
CNEP1R1-202ENST00000427478 ZC2HC1AQ96GY0 325 aa16.75■□□□□ 0.27
CNEP1R1-202ENST00000427478 GNB1LQ9BYB4 327 aa16.75■□□□□ 0.27
CNEP1R1-202ENST00000427478 PRSS22Q9GZN4 317 aa16.75■□□□□ 0.27
CNEP1R1-202ENST00000427478 NAT8BQ9UHF3 227 aa16.75■□□□□ 0.27
CNEP1R1-202ENST00000427478 ZANQ9Y493 2812 aa16.75■□□□□ 0.27
CNEP1R1-202ENST00000427478 NAV2Q8IVL1 2488 aa16.75■□□□□ 0.27
CNEP1R1-202ENST00000427478 ZNF253O75346 499 aa16.75■□□□□ 0.27
CNEP1R1-202ENST00000427478 SMIM6P0DI80 62 aa16.75■□□□□ 0.27
CNEP1R1-202ENST00000427478 OR5R1Q8NH85 324 aa16.75■□□□□ 0.27
CNEP1R1-202ENST00000427478 ZNF331Q9NQX6 463 aaPredicted RBP16.75■□□□□ 0.27
CNEP1R1-202ENST00000427478 ZFP30Q9Y2G7 519 aa16.75■□□□□ 0.27
CNEP1R1-202ENST00000427478 IGKV2-40A0A087WW87 121 aaPredicted RBP16.74■□□□□ 0.27
CNEP1R1-202ENST00000427478 IGKV2D-40P01614 121 aaPredicted RBP16.74■□□□□ 0.27
CNEP1R1-202ENST00000427478 COA6Q5JTJ3 125 aaKnown RBP16.74■□□□□ 0.27
CNEP1R1-202ENST00000427478 APCP25054 2843 aa16.74■□□□□ 0.27
CNEP1R1-202ENST00000427478 A0A087X0K7 114 aa16.73■□□□□ 0.27
CNEP1R1-202ENST00000427478 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP16.73■□□□□ 0.27
CNEP1R1-202ENST00000427478 HIGD1CA8MV81 97 aa16.73■□□□□ 0.27
CNEP1R1-202ENST00000427478 CHEK1O14757 476 aa16.73■□□□□ 0.27
CNEP1R1-202ENST00000427478 FABP4P15090 132 aa16.73■□□□□ 0.27
CNEP1R1-202ENST00000427478 RAB4BP61018 213 aa16.73■□□□□ 0.27
CNEP1R1-202ENST00000427478 CYB5R2Q6BCY4 276 aa16.73■□□□□ 0.27
CNEP1R1-202ENST00000427478 WDR73Q6P4I2 378 aa16.73■□□□□ 0.27
CNEP1R1-202ENST00000427478 TMEM136Q6ZRR5 245 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms