RNA–Protein interactions for RNA: ENST00000417285.6

VEGFA-208, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,081 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-208ENST00000417285 ZNF738Q8NE65 137 aa18.09■□□□□ 0.49
VEGFA-208ENST00000417285 NIPSNAP3BQ9BS92 247 aa18.09■□□□□ 0.49
VEGFA-208ENST00000417285 FAM222AQ5U5X8 452 aa18.08■□□□□ 0.48
VEGFA-208ENST00000417285 LINC00305Q7Z4B0 112 aa18.08■□□□□ 0.48
VEGFA-208ENST00000417285 MGST2Q99735 147 aa18.08■□□□□ 0.48
VEGFA-208ENST00000417285 TMEM208Q9BTX3 173 aa18.08■□□□□ 0.48
VEGFA-208ENST00000417285 LOC102723971A0A1B0GUV8 181 aa18.07■□□□□ 0.48
VEGFA-208ENST00000417285 COX7A2P2O60397 106 aa18.07■□□□□ 0.48
VEGFA-208ENST00000417285 S100A10P60903 97 aa18.07■□□□□ 0.48
VEGFA-208ENST00000417285 B2MP61769 119 aa18.07■□□□□ 0.48
VEGFA-208ENST00000417285 C11orf1Q9H5F2 150 aa18.07■□□□□ 0.48
VEGFA-208ENST00000417285 FAM24AA6NFZ4 105 aa18.06■□□□□ 0.48
VEGFA-208ENST00000417285 CST7O76096 145 aa18.06■□□□□ 0.48
VEGFA-208ENST00000417285 CXCL3P19876 107 aa18.06■□□□□ 0.48
VEGFA-208ENST00000417285 CAMLGP49069 296 aa18.06■□□□□ 0.48
VEGFA-208ENST00000417285 OR11H7Q8NGC8 314 aa18.06■□□□□ 0.48
VEGFA-208ENST00000417285 UQCC1Q9NVA1 299 aa18.06■□□□□ 0.48
VEGFA-208ENST00000417285 CXCL2P19875 107 aa18.05■□□□□ 0.48
VEGFA-208ENST00000417285 ENKURQ8TC29 256 aa18.05■□□□□ 0.48
VEGFA-208ENST00000417285 LYRM2Q9NU23 88 aaPredicted RBP18.05■□□□□ 0.48
VEGFA-208ENST00000417285 YTHDF2Q9Y5A9 579 aaKnown RBP18.05■□□□□ 0.48
VEGFA-208ENST00000417285 MRPS12O15235 138 aaKnown RBP18.04■□□□□ 0.48
VEGFA-208ENST00000417285 INSP01308 110 aa18.04■□□□□ 0.48
VEGFA-208ENST00000417285 RAB32Q13637 225 aa18.04■□□□□ 0.48
VEGFA-208ENST00000417285 PSG3Q16557 428 aa18.04■□□□□ 0.48
VEGFA-208ENST00000417285 SPINK13Q1W4C9 94 aa18.04■□□□□ 0.48
VEGFA-208ENST00000417285 C10orf113Q5VZT2 155 aa18.04■□□□□ 0.48
VEGFA-208ENST00000417285 LCN15Q6UWW0 184 aa18.04■□□□□ 0.48
VEGFA-208ENST00000417285 Q6ZRG5 221 aa18.04■□□□□ 0.48
VEGFA-208ENST00000417285 NRARPQ7Z6K4 114 aa18.04■□□□□ 0.48
VEGFA-208ENST00000417285 STX12Q86Y82 276 aa18.04■□□□□ 0.48
VEGFA-208ENST00000417285 BPIFA4PQ86YQ2 179 aa18.04■□□□□ 0.48
VEGFA-208ENST00000417285 DNAH6Q9C0G6 4158 aa18.04■□□□□ 0.48
VEGFA-208ENST00000417285 S100A11P31949 105 aa18.03■□□□□ 0.48
VEGFA-208ENST00000417285 SULT1A1P50225 295 aa18.03■□□□□ 0.48
VEGFA-208ENST00000417285 IL15RAQ13261 267 aa18.03■□□□□ 0.48
VEGFA-208ENST00000417285 LINC00336Q6ZUF6 198 aa18.03■□□□□ 0.48
VEGFA-208ENST00000417285 OR8A1Q8NGG7 326 aa18.03■□□□□ 0.48
VEGFA-208ENST00000417285 GPN1Q9HCN4 374 aaPredicted RBP18.03■□□□□ 0.48
VEGFA-208ENST00000417285 M0R2Z0 102 aa18.02■□□□□ 0.48
VEGFA-208ENST00000417285 UPK1BO75841 260 aa18.02■□□□□ 0.48
VEGFA-208ENST00000417285 HBG1P69891 147 aa18.02■□□□□ 0.48
VEGFA-208ENST00000417285 HBG2P69892 147 aa18.02■□□□□ 0.48
VEGFA-208ENST00000417285 HIST1H1AQ02539 215 aaPredicted RBP18.02■□□□□ 0.48
VEGFA-208ENST00000417285 TMEM37Q8WXS4 190 aa18.02■□□□□ 0.48
VEGFA-208ENST00000417285 SLC50A1Q9BRV3 221 aa18.02■□□□□ 0.48
VEGFA-208ENST00000417285 PPP1R14DQ9NXH3 145 aa18.02■□□□□ 0.48
VEGFA-208ENST00000417285 WDR83OSQ9Y284 106 aa18.02■□□□□ 0.48
VEGFA-208ENST00000417285 A6NHS1 94 aa18.01■□□□□ 0.47
VEGFA-208ENST00000417285 BOLA2-SMG1P6H3BVE0 249 aa18.01■□□□□ 0.47
VEGFA-208ENST00000417285 RHOBP62745 196 aa18.01■□□□□ 0.47
VEGFA-208ENST00000417285 VWC2Q2TAL6 325 aa18.01■□□□□ 0.47
VEGFA-208ENST00000417285 TMEM252Q8N6L7 170 aa18.01■□□□□ 0.47
VEGFA-208ENST00000417285 OR1L4Q8NGR5 311 aa18.01■□□□□ 0.47
VEGFA-208ENST00000417285 DNAJC4Q9NNZ3 241 aa18.01■□□□□ 0.47
VEGFA-208ENST00000417285 PLA2G2EQ9NZK7 142 aa18.01■□□□□ 0.47
VEGFA-208ENST00000417285 IGSF23A1L1A6 192 aa18■□□□□ 0.47
VEGFA-208ENST00000417285 CRXO43186 299 aaPredicted RBP18■□□□□ 0.47
VEGFA-208ENST00000417285 DAD1P61803 113 aa18■□□□□ 0.47
VEGFA-208ENST00000417285 MIC13Q5XKP0 118 aa18■□□□□ 0.47
VEGFA-208ENST00000417285 RPUSD4Q96CM3 377 aaKnown RBP18■□□□□ 0.47
VEGFA-208ENST00000417285 ZNF331Q9NQX6 463 aaPredicted RBP18■□□□□ 0.47
VEGFA-208ENST00000417285 PTTG2Q9NZH5 202 aa18■□□□□ 0.47
VEGFA-208ENST00000417285 UBE2L5PA0A1B0GUS4 154 aa17.99■□□□□ 0.47
VEGFA-208ENST00000417285 TSPOP30536 169 aa17.99■□□□□ 0.47
VEGFA-208ENST00000417285 BAXQ07812 192 aa17.99■□□□□ 0.47
VEGFA-208ENST00000417285 OPCMLQ14982 345 aa17.99■□□□□ 0.47
VEGFA-208ENST00000417285 PFDN5Q99471 154 aa17.99■□□□□ 0.47
VEGFA-208ENST00000417285 LYRM9A8MSI8 78 aa17.98■□□□□ 0.47
VEGFA-208ENST00000417285 RPL29P47914 159 aaKnown RBP17.98■□□□□ 0.47
VEGFA-208ENST00000417285 ATP6V1FQ16864 119 aa17.98■□□□□ 0.47
VEGFA-208ENST00000417285 BAP18Q8IXM2 172 aa17.98■□□□□ 0.47
VEGFA-208ENST00000417285 TMEM256Q8N2U0 113 aa17.98■□□□□ 0.47
VEGFA-208ENST00000417285 ZNF705GA8MUZ8 300 aaPredicted RBP17.97■□□□□ 0.47
VEGFA-208ENST00000417285 SNRPCP09234 159 aaKnown RBP17.97■□□□□ 0.47
VEGFA-208ENST00000417285 HTN3P15516 51 aa17.97■□□□□ 0.47
VEGFA-208ENST00000417285 MORN5Q5VZ52 161 aa17.97■□□□□ 0.47
VEGFA-208ENST00000417285 PXMP4Q9Y6I8 212 aa17.97■□□□□ 0.47
VEGFA-208ENST00000417285 HECTD4Q9Y4D8 3996 aa17.96■□□□□ 0.47
VEGFA-208ENST00000417285 TRAV12-2A0A075B6T6 113 aa17.96■□□□□ 0.47
VEGFA-208ENST00000417285 PRAF2O60831 178 aa17.96■□□□□ 0.47
VEGFA-208ENST00000417285 RLN2P04090 185 aa17.96■□□□□ 0.47
VEGFA-208ENST00000417285 IGLC2P0DOY2 106 aa17.96■□□□□ 0.47
VEGFA-208ENST00000417285 LGALS9BQ3B8N2 356 aa17.96■□□□□ 0.47
VEGFA-208ENST00000417285 RNF212Q495C1 297 aa17.96■□□□□ 0.47
VEGFA-208ENST00000417285 CHAC2Q8WUX2 184 aa17.96■□□□□ 0.47
VEGFA-208ENST00000417285 SLC39A9Q9NUM3 307 aa17.96■□□□□ 0.47
VEGFA-208ENST00000417285 FGF7P21781 194 aa17.95■□□□□ 0.46
VEGFA-208ENST00000417285 GUK1Q16774 197 aa17.95■□□□□ 0.46
VEGFA-208ENST00000417285 UBE2DNLQ8IWF7 75 aa17.95■□□□□ 0.46
VEGFA-208ENST00000417285 LINC01587Q99440 93 aa17.95■□□□□ 0.46
VEGFA-208ENST00000417285 MPDU1O75352 247 aa17.94■□□□□ 0.46
VEGFA-208ENST00000417285 IFITM3Q01628 133 aa17.94■□□□□ 0.46
VEGFA-208ENST00000417285 NMES1Q9C002 83 aa17.94■□□□□ 0.46
VEGFA-208ENST00000417285 INMT-MINDY4F8WBC2 141 aa17.93■□□□□ 0.46
VEGFA-208ENST00000417285 H3BTX0 84 aa17.93■□□□□ 0.46
VEGFA-208ENST00000417285 SLC17A3O00476 420 aa17.93■□□□□ 0.46
VEGFA-208ENST00000417285 SIX6O95475 246 aa17.93■□□□□ 0.46
VEGFA-208ENST00000417285 CDKN1BP46527 198 aa17.93■□□□□ 0.46
VEGFA-208ENST00000417285 OR10J6PQ8NGY7 276 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 87.1 ms