RNA–Protein interactions for RNA: ENST00000414879.5

PTPRF-205, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 2

Gene PTPRF, Length 4,836 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-205ENST00000414879 C10orf105Q8TEF2 133 aa9.57□□□□□ -0.88
PTPRF-205ENST00000414879 GLMPQ8WWB7 406 aa9.57□□□□□ -0.88
PTPRF-205ENST00000414879 RCHY1Q96PM5 261 aa9.57□□□□□ -0.88
PTPRF-205ENST00000414879 TRBV19A0A075B6N1 114 aa9.57□□□□□ -0.88
PTPRF-205ENST00000414879 RPL36AP83881 106 aaKnown RBP9.57□□□□□ -0.88
PTPRF-205ENST00000414879 DNLZQ5SXM8 178 aa9.57□□□□□ -0.88
PTPRF-205ENST00000414879 RPL36ALQ969Q0 106 aaKnown RBP9.57□□□□□ -0.88
PTPRF-205ENST00000414879 H3BRN7 92 aa9.57□□□□□ -0.88
PTPRF-205ENST00000414879 LINC00205P59089 165 aa9.57□□□□□ -0.88
PTPRF-205ENST00000414879 CIDEAO60543 219 aa9.56□□□□□ -0.88
PTPRF-205ENST00000414879 SH2D1AO60880 128 aa9.56□□□□□ -0.88
PTPRF-205ENST00000414879 ADMP35318 185 aa9.56□□□□□ -0.88
PTPRF-205ENST00000414879 WT1-ASQ06250 92 aa9.56□□□□□ -0.88
PTPRF-205ENST00000414879 ARL6IP6Q8N6S5 226 aa9.56□□□□□ -0.88
PTPRF-205ENST00000414879 MRPL53Q96EL3 112 aaKnown RBP9.56□□□□□ -0.88
PTPRF-205ENST00000414879 TMEM89A2RUT3 159 aa9.56□□□□□ -0.88
PTPRF-205ENST00000414879 INS-IGF2F8WCM5 200 aa9.56□□□□□ -0.88
PTPRF-205ENST00000414879 UQCRFS1P47985 274 aa9.56□□□□□ -0.88
PTPRF-205ENST00000414879 DUX4L9Q6RFH8 374 aaPredicted RBP9.56□□□□□ -0.88
PTPRF-205ENST00000414879 FAM231DQ6ZW35 169 aa9.56□□□□□ -0.88
PTPRF-205ENST00000414879 Q8NA96 180 aa9.56□□□□□ -0.88
PTPRF-205ENST00000414879 IGFBPL1Q8WX77 278 aa9.56□□□□□ -0.88
PTPRF-205ENST00000414879 FOXC2Q99958 501 aa9.56□□□□□ -0.88
PTPRF-205ENST00000414879 TMEM160Q9NX00 188 aa9.56□□□□□ -0.88
PTPRF-205ENST00000414879 ZFHX2Q9C0A1 2572 aaPredicted RBP9.56□□□□□ -0.88
PTPRF-205ENST00000414879 ZGRF1Q86YA3 2104 aa9.56□□□□□ -0.88
PTPRF-205ENST00000414879 SRSF2Q01130 221 aaKnown RBP9.56□□□□□ -0.88
PTPRF-205ENST00000414879 ATRAIDQ6UW56 229 aa9.56□□□□□ -0.88
PTPRF-205ENST00000414879 JKAMPQ9P055 326 aa9.56□□□□□ -0.88
PTPRF-205ENST00000414879 VCYO14598 125 aa9.56□□□□□ -0.88
PTPRF-205ENST00000414879 TCF21O43680 179 aa9.56□□□□□ -0.88
PTPRF-205ENST00000414879 SERF1AO75920 110 aa9.56□□□□□ -0.88
PTPRF-205ENST00000414879 VWC2Q2TAL6 325 aa9.56□□□□□ -0.88
PTPRF-205ENST00000414879 USF3Q68DE3 2245 aa9.55□□□□□ -0.88
PTPRF-205ENST00000414879 WIPF3A6NGB9 483 aa9.55□□□□□ -0.88
PTPRF-205ENST00000414879 LINC00587B1AMM8 73 aa9.55□□□□□ -0.88
PTPRF-205ENST00000414879 H3BVH4 76 aa9.55□□□□□ -0.88
PTPRF-205ENST00000414879 C3orf56Q8N813 242 aa9.55□□□□□ -0.88
PTPRF-205ENST00000414879 SLC25A2Q9BXI2 301 aa9.55□□□□□ -0.88
PTPRF-205ENST00000414879 MMP23AO75900 390 aa9.55□□□□□ -0.88
PTPRF-205ENST00000414879 SYNJ2BPP57105 145 aa9.55□□□□□ -0.88
PTPRF-205ENST00000414879 LENEPQ9Y5L5 61 aa9.55□□□□□ -0.88
PTPRF-205ENST00000414879 DPM2O94777 84 aa9.54□□□□□ -0.88
PTPRF-205ENST00000414879 IGLC1P0CG04 106 aa9.54□□□□□ -0.88
PTPRF-205ENST00000414879 LAGE3Q14657 143 aa9.54□□□□□ -0.88
PTPRF-205ENST00000414879 FAM90A2PQ658T7 463 aa9.54□□□□□ -0.88
PTPRF-205ENST00000414879 ZNF256Q9Y2P7 627 aaPredicted RBP9.54□□□□□ -0.88
PTPRF-205ENST00000414879 LRRC75A-AS1Q8N1F1 130 aa9.54□□□□□ -0.88
PTPRF-205ENST00000414879 CENPVL3A0A0U1RRI6 287 aa9.54□□□□□ -0.88
PTPRF-205ENST00000414879 COLCA2A8K830 154 aa9.54□□□□□ -0.88
PTPRF-205ENST00000414879 FCN3O75636 299 aa9.54□□□□□ -0.88
PTPRF-205ENST00000414879 ZNF25P17030 456 aaPredicted RBP9.54□□□□□ -0.88
PTPRF-205ENST00000414879 CFAP161Q6P656 301 aa9.54□□□□□ -0.88
PTPRF-205ENST00000414879 C11orf52Q96A22 123 aa9.54□□□□□ -0.88
PTPRF-205ENST00000414879 FGF23Q9GZV9 251 aaPredicted RBP9.54□□□□□ -0.88
PTPRF-205ENST00000414879 CRXO43186 299 aaPredicted RBP9.54□□□□□ -0.88
PTPRF-205ENST00000414879 HIST1H2BKO60814 126 aa9.54□□□□□ -0.88
PTPRF-205ENST00000414879 HIST1H2BJP06899 126 aa9.54□□□□□ -0.88
PTPRF-205ENST00000414879 HIST1H2BOP23527 126 aa9.54□□□□□ -0.88
PTPRF-205ENST00000414879 HIST1H2BBP33778 126 aa9.54□□□□□ -0.88
PTPRF-205ENST00000414879 HIST1H2BDP58876 126 aa9.54□□□□□ -0.88
PTPRF-205ENST00000414879 HIST1H2BCP62807 126 aa9.54□□□□□ -0.88
PTPRF-205ENST00000414879 HIST2H2BEQ16778 126 aa9.54□□□□□ -0.88
PTPRF-205ENST00000414879 RNF151Q2KHN1 245 aa9.54□□□□□ -0.88
PTPRF-205ENST00000414879 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.54□□□□□ -0.88
PTPRF-205ENST00000414879 LYZL1Q6UWQ5 148 aa9.54□□□□□ -0.88
PTPRF-205ENST00000414879 HIST1H2BHQ93079 126 aa9.54□□□□□ -0.88
PTPRF-205ENST00000414879 DOCK7Q96N67 2140 aa9.54□□□□□ -0.88
PTPRF-205ENST00000414879 HIST1H2BNQ99877 126 aa9.54□□□□□ -0.88
PTPRF-205ENST00000414879 HIST1H2BMQ99879 126 aa9.54□□□□□ -0.88
PTPRF-205ENST00000414879 CNTFRP26992 372 aa9.53□□□□□ -0.88
PTPRF-205ENST00000414879 FOXE3Q13461 319 aa9.53□□□□□ -0.88
PTPRF-205ENST00000414879 MS4A6AQ9H2W1 248 aa9.53□□□□□ -0.88
PTPRF-205ENST00000414879 PGPEP1LA6NFU8 196 aa9.53□□□□□ -0.88
PTPRF-205ENST00000414879 HINT1P49773 126 aaPredicted RBP9.53□□□□□ -0.88
PTPRF-205ENST00000414879 PRR20EP86478 221 aa9.53□□□□□ -0.88
PTPRF-205ENST00000414879 PRR20CP86479 221 aa9.53□□□□□ -0.88
PTPRF-205ENST00000414879 PRR20DP86480 221 aa9.53□□□□□ -0.88
PTPRF-205ENST00000414879 PRR20BP86481 221 aa9.53□□□□□ -0.88
PTPRF-205ENST00000414879 PRR20AP86496 221 aa9.53□□□□□ -0.88
PTPRF-205ENST00000414879 MRAP2Q96G30 205 aa9.53□□□□□ -0.88
PTPRF-205ENST00000414879 C18orf15Q96N68 181 aa9.53□□□□□ -0.88
PTPRF-205ENST00000414879 LRP4O75096 1905 aa9.53□□□□□ -0.88
PTPRF-205ENST00000414879 UBE2CO00762 179 aa9.53□□□□□ -0.88
PTPRF-205ENST00000414879 PFN1P07737 140 aaKnown RBP9.53□□□□□ -0.88
PTPRF-205ENST00000414879 GRNP28799 593 aaKnown RBP9.53□□□□□ -0.88
PTPRF-205ENST00000414879 ACTL10Q5JWF8 245 aa9.53□□□□□ -0.88
PTPRF-205ENST00000414879 ZNRD1Q9P1U0 126 aa9.53□□□□□ -0.88
PTPRF-205ENST00000414879 K7ERU9 68 aa9.52□□□□□ -0.88
PTPRF-205ENST00000414879 IGHV4-39P01824 125 aa9.52□□□□□ -0.88
PTPRF-205ENST00000414879 NDPQ00604 133 aa9.52□□□□□ -0.88
PTPRF-205ENST00000414879 NIT1Q86X76 327 aa9.52□□□□□ -0.88
PTPRF-205ENST00000414879 ADAMTS9Q9P2N4 1935 aa9.52□□□□□ -0.89
PTPRF-205ENST00000414879 IGLC7A0M8Q6 106 aa9.52□□□□□ -0.89
PTPRF-205ENST00000414879 GAGE10A6NGK3 116 aa9.52□□□□□ -0.89
PTPRF-205ENST00000414879 MLANAQ16655 118 aa9.52□□□□□ -0.89
PTPRF-205ENST00000414879 C11orf44Q8N8P7 122 aa9.52□□□□□ -0.89
PTPRF-205ENST00000414879 NUP35Q8NFH5 326 aa9.52□□□□□ -0.89
PTPRF-205ENST00000414879 IFI27L1Q96BM0 104 aa9.52□□□□□ -0.89
PTPRF-205ENST00000414879 SMIM13P0DJ93 91 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms