RNA–Protein interactions for RNA: ENST00000414781.1

RAPGEF1-204, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 5

Gene RAPGEF1, Length 957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-204ENST00000414781 BLOC1S1P78537 153 aa10.05□□□□□ -0.8
RAPGEF1-204ENST00000414781 ALKAL2Q6UX46 152 aa10.05□□□□□ -0.8
RAPGEF1-204ENST00000414781 PATE2Q6UY27 113 aa10.05□□□□□ -0.8
RAPGEF1-204ENST00000414781 IL34Q6ZMJ4 242 aa10.05□□□□□ -0.8
RAPGEF1-204ENST00000414781 ZNF767PQ75MW2 155 aa10.05□□□□□ -0.8
RAPGEF1-204ENST00000414781 WFDC3Q8IUB2 231 aa10.05□□□□□ -0.8
RAPGEF1-204ENST00000414781 DEFB125Q8N687 156 aa10.05□□□□□ -0.8
RAPGEF1-204ENST00000414781 PHLDA1Q8WV24 401 aaPredicted RBP10.05□□□□□ -0.8
RAPGEF1-204ENST00000414781 SAT2Q96F10 170 aaPredicted RBP10.05□□□□□ -0.8
RAPGEF1-204ENST00000414781 SHANK2-AS3Q9BTD1 123 aa10.05□□□□□ -0.8
RAPGEF1-204ENST00000414781 RFNGQ9Y644 331 aa10.05□□□□□ -0.8
RAPGEF1-204ENST00000414781 IGHV7-4-1A0A0J9YVY3 117 aa10.04□□□□□ -0.8
RAPGEF1-204ENST00000414781 ZNF98A6NK75 572 aa10.04□□□□□ -0.8
RAPGEF1-204ENST00000414781 C8orf88P0DMB2 117 aa10.04□□□□□ -0.8
RAPGEF1-204ENST00000414781 TCTAP57738 103 aa10.04□□□□□ -0.8
RAPGEF1-204ENST00000414781 RAB14P61106 215 aa10.04□□□□□ -0.8
RAPGEF1-204ENST00000414781 TM4SF20Q53R12 229 aa10.04□□□□□ -0.8
RAPGEF1-204ENST00000414781 GCSAMLQ5JQS6 135 aa10.04□□□□□ -0.8
RAPGEF1-204ENST00000414781 FAM122CQ6P4D5 195 aa10.04□□□□□ -0.8
RAPGEF1-204ENST00000414781 OR8I2Q8N0Y5 310 aa10.04□□□□□ -0.8
RAPGEF1-204ENST00000414781 FAM213BQ8TBF2 198 aa10.04□□□□□ -0.8
RAPGEF1-204ENST00000414781 SEPSECSQ9HD40 501 aaKnown RBP10.04□□□□□ -0.8
RAPGEF1-204ENST00000414781 SMPXQ9UHP9 88 aa10.04□□□□□ -0.8
RAPGEF1-204ENST00000414781 U3KQE9 123 aa10.04□□□□□ -0.8
RAPGEF1-204ENST00000414781 IGHV3OR16-8A0A075B7F1 116 aa10.03□□□□□ -0.8
RAPGEF1-204ENST00000414781 CTXND1A0A1B0GTU2 59 aa10.03□□□□□ -0.8
RAPGEF1-204ENST00000414781 C2orf70A6NJV1 201 aa10.03□□□□□ -0.8
RAPGEF1-204ENST00000414781 ZNF705EA8MWA4 302 aaPredicted RBP10.03□□□□□ -0.8
RAPGEF1-204ENST00000414781 OR11H12B2RN74 326 aa10.03□□□□□ -0.8
RAPGEF1-204ENST00000414781 H3BRN7 92 aa10.03□□□□□ -0.8
RAPGEF1-204ENST00000414781 BUB3O43684 328 aa10.03□□□□□ -0.8
RAPGEF1-204ENST00000414781 H2AFB1P0C5Y9 115 aa10.03□□□□□ -0.8
RAPGEF1-204ENST00000414781 RPL7P18124 248 aaKnown RBP10.03□□□□□ -0.8
RAPGEF1-204ENST00000414781 CBLN1P23435 193 aa10.03□□□□□ -0.8
RAPGEF1-204ENST00000414781 KHDC3LQ587J8 217 aa10.03□□□□□ -0.8
RAPGEF1-204ENST00000414781 PQLC2Q6ZP29 291 aa10.03□□□□□ -0.8
RAPGEF1-204ENST00000414781 BPIFA4PQ86YQ2 179 aa10.03□□□□□ -0.8
RAPGEF1-204ENST00000414781 RAB24Q969Q5 203 aa10.03□□□□□ -0.8
RAPGEF1-204ENST00000414781 ZNF414Q96IQ9 312 aa10.03□□□□□ -0.8
RAPGEF1-204ENST00000414781 RHPN1-AS1Q9BWJ2 59 aa10.03□□□□□ -0.8
RAPGEF1-204ENST00000414781 VSIRQ9H7M9 311 aa10.03□□□□□ -0.8
RAPGEF1-204ENST00000414781 TP53TG1Q9Y2A0 90 aa10.03□□□□□ -0.8
RAPGEF1-204ENST00000414781 DMBT1Q9UGM3 2413 aaPredicted RBP10.03□□□□□ -0.8
RAPGEF1-204ENST00000414781 TMEM213A2RRL7 107 aa10.02□□□□□ -0.81
RAPGEF1-204ENST00000414781 IZUMO1RA6ND01 250 aa10.02□□□□□ -0.81
RAPGEF1-204ENST00000414781 HELTA6NFD8 242 aa10.02□□□□□ -0.81
RAPGEF1-204ENST00000414781 PRSS29PA6NIE9 313 aa10.02□□□□□ -0.81
RAPGEF1-204ENST00000414781 ZNF207O43670 478 aaKnown RBP10.02□□□□□ -0.81
RAPGEF1-204ENST00000414781 CXorf1O96002 111 aa10.02□□□□□ -0.81
RAPGEF1-204ENST00000414781 HBE1P02100 147 aa10.02□□□□□ -0.81
RAPGEF1-204ENST00000414781 FOLR2P14207 255 aa10.02□□□□□ -0.81
RAPGEF1-204ENST00000414781 GALR1P47211 349 aa10.02□□□□□ -0.81
RAPGEF1-204ENST00000414781 MBD3L1Q8WWY6 194 aa10.02□□□□□ -0.81
RAPGEF1-204ENST00000414781 UHRF2Q96PU4 802 aa10.02□□□□□ -0.81
RAPGEF1-204ENST00000414781 TMEM14CQ9P0S9 112 aa10.02□□□□□ -0.81
RAPGEF1-204ENST00000414781 CHEK1O14757 476 aa10.01□□□□□ -0.81
RAPGEF1-204ENST00000414781 CSN3P07498 182 aa10.01□□□□□ -0.81
RAPGEF1-204ENST00000414781 CD7P09564 240 aa10.01□□□□□ -0.81
RAPGEF1-204ENST00000414781 MEOX2P50222 304 aa10.01□□□□□ -0.81
RAPGEF1-204ENST00000414781 FAM74A1Q5RGS3 127 aa10.01□□□□□ -0.81
RAPGEF1-204ENST00000414781 C16orf54Q6UWD8 224 aa10.01□□□□□ -0.81
RAPGEF1-204ENST00000414781 MIR17HGQ75NE6 70 aa10.01□□□□□ -0.81
RAPGEF1-204ENST00000414781 SFT2D1Q8WV19 159 aa10.01□□□□□ -0.81
RAPGEF1-204ENST00000414781 RNF183Q96D59 192 aa10.01□□□□□ -0.81
RAPGEF1-204ENST00000414781 SCRT1Q9BWW7 348 aa10.01□□□□□ -0.81
RAPGEF1-204ENST00000414781 SLC25A22Q9H936 323 aa10.01□□□□□ -0.81
RAPGEF1-204ENST00000414781 TRAV1-1A0A0B4J248 108 aa10□□□□□ -0.81
RAPGEF1-204ENST00000414781 MAP1LC3B2A6NCE7 125 aa10□□□□□ -0.81
RAPGEF1-204ENST00000414781 OR7C2O60412 319 aa10□□□□□ -0.81
RAPGEF1-204ENST00000414781 STAG3L2P0CL84 134 aa10□□□□□ -0.81
RAPGEF1-204ENST00000414781 STAG3L3P0CL85 134 aa10□□□□□ -0.81
RAPGEF1-204ENST00000414781 PPT1P50897 306 aa10□□□□□ -0.81
RAPGEF1-204ENST00000414781 GUK1Q16774 197 aa10□□□□□ -0.81
RAPGEF1-204ENST00000414781 SAMD13Q5VXD3 122 aa10□□□□□ -0.81
RAPGEF1-204ENST00000414781 DYNLRB2Q8TF09 96 aa10□□□□□ -0.81
RAPGEF1-204ENST00000414781 MAP1LC3BQ9GZQ8 125 aa10□□□□□ -0.81
RAPGEF1-204ENST00000414781 WFDC10AQ9H1F0 79 aa10□□□□□ -0.81
RAPGEF1-204ENST00000414781 OR51M1Q9H341 326 aa10□□□□□ -0.81
RAPGEF1-204ENST00000414781 TMEM167BQ9NRX6 74 aa10□□□□□ -0.81
RAPGEF1-204ENST00000414781 ZNF785A8K8V0 405 aa9.99□□□□□ -0.81
RAPGEF1-204ENST00000414781 APOHP02749 345 aaPredicted RBP9.99□□□□□ -0.81
RAPGEF1-204ENST00000414781 FHITP49789 147 aa9.99□□□□□ -0.81
RAPGEF1-204ENST00000414781 RPL11P62913 178 aaKnown RBP9.99□□□□□ -0.81
RAPGEF1-204ENST00000414781 PAFAH1B2P68402 229 aa9.99□□□□□ -0.81
RAPGEF1-204ENST00000414781 LCN15Q6UWW0 184 aa9.99□□□□□ -0.81
RAPGEF1-204ENST00000414781 PAXXQ9BUH6 204 aa9.99□□□□□ -0.81
RAPGEF1-204ENST00000414781 UBR4Q5T4S7 5183 aa9.98□□□□□ -0.81
RAPGEF1-204ENST00000414781 IGHV3OR16-13A0A075B7E8 117 aa9.98□□□□□ -0.81
RAPGEF1-204ENST00000414781 LOC102724200A0A096LPH7 203 aaPredicted RBP9.98□□□□□ -0.81
RAPGEF1-204ENST00000414781 IGHV3-49A0A0A0MS15 119 aa9.98□□□□□ -0.81
RAPGEF1-204ENST00000414781 IGHV3-74A0A0B4J1X5 117 aa9.98□□□□□ -0.81
RAPGEF1-204ENST00000414781 TRAV5A0A0B4J249 113 aa9.98□□□□□ -0.81
RAPGEF1-204ENST00000414781 TRAV25A0A0B4J276 109 aa9.98□□□□□ -0.81
RAPGEF1-204ENST00000414781 IGHV3-66A0A0C4DH42 116 aa9.98□□□□□ -0.81
RAPGEF1-204ENST00000414781 HIST1H1EP10412 219 aaKnown RBP9.98□□□□□ -0.81
RAPGEF1-204ENST00000414781 PSMB3P49720 205 aa9.98□□□□□ -0.81
RAPGEF1-204ENST00000414781 IFITM2Q01629 132 aa9.98□□□□□ -0.81
RAPGEF1-204ENST00000414781 ZNF726P1Q15940 193 aa9.98□□□□□ -0.81
RAPGEF1-204ENST00000414781 SPATA31B1PQ5VZV4 182 aa9.98□□□□□ -0.81
RAPGEF1-204ENST00000414781 LEMD1Q68G75 181 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms