RNA–Protein interactions for RNA: ENST00000404284.6

TOM1-203, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 2

Gene TOM1, Length 2,622 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-203ENST00000404284 GFRA4Q9GZZ7 299 aa12.41□□□□□ -0.42
TOM1-203ENST00000404284 GTSF1LQ9H1H1 148 aa12.41□□□□□ -0.42
TOM1-203ENST00000404284 SMAGPQ0VAQ4 97 aa12.41□□□□□ -0.42
TOM1-203ENST00000404284 RNF5Q99942 180 aa12.41□□□□□ -0.42
TOM1-203ENST00000404284 ST20Q9HBF5 79 aa12.41□□□□□ -0.42
TOM1-203ENST00000404284 K7EIM0 57 aa12.4□□□□□ -0.42
TOM1-203ENST00000404284 AZU1P20160 251 aa12.4□□□□□ -0.42
TOM1-203ENST00000404284 CD24P25063 80 aa12.4□□□□□ -0.42
TOM1-203ENST00000404284 NBL1P41271 181 aa12.4□□□□□ -0.42
TOM1-203ENST00000404284 RBPMS2Q6ZRY4 209 aaKnown RBP12.4□□□□□ -0.42
TOM1-203ENST00000404284 CIARTQ8N365 385 aaPredicted RBP12.4□□□□□ -0.42
TOM1-203ENST00000404284 NAA38Q9BRA0 125 aaKnown RBP12.4□□□□□ -0.42
TOM1-203ENST00000404284 SPTBN2O15020 2390 aa12.4□□□□□ -0.43
TOM1-203ENST00000404284 A0A1B0GV72 72 aa12.4□□□□□ -0.43
TOM1-203ENST00000404284 TIMM23O14925 209 aa12.4□□□□□ -0.43
TOM1-203ENST00000404284 PLGLAQ15195 96 aa12.4□□□□□ -0.43
TOM1-203ENST00000404284 FAM120AOSQ5T036 256 aa12.4□□□□□ -0.43
TOM1-203ENST00000404284 SRSF8Q9BRL6 282 aaKnown RBP12.4□□□□□ -0.43
TOM1-203ENST00000404284 SCGB2A2Q13296 93 aa12.39□□□□□ -0.43
TOM1-203ENST00000404284 UFSP1Q6NVU6 142 aa12.39□□□□□ -0.43
TOM1-203ENST00000404284 GOLT1AQ6ZVE7 132 aa12.39□□□□□ -0.43
TOM1-203ENST00000404284 GTF2H5Q6ZYL4 71 aa12.39□□□□□ -0.43
TOM1-203ENST00000404284 DAZAP1Q96EP5 407 aaKnown RBP12.39□□□□□ -0.43
TOM1-203ENST00000404284 TMEM70Q9BUB7 260 aa12.39□□□□□ -0.43
TOM1-203ENST00000404284 ZNF785A8K8V0 405 aa12.39□□□□□ -0.43
TOM1-203ENST00000404284 OVOL3O00110 214 aa12.39□□□□□ -0.43
TOM1-203ENST00000404284 GRNP28799 593 aaKnown RBP12.39□□□□□ -0.43
TOM1-203ENST00000404284 FOXA3P55318 350 aaPredicted RBP12.39□□□□□ -0.43
TOM1-203ENST00000404284 ZNF672Q499Z4 452 aaPredicted RBP12.39□□□□□ -0.43
TOM1-203ENST00000404284 ONECUT1Q9UBC0 465 aa12.39□□□□□ -0.43
TOM1-203ENST00000404284 COL8A1P27658 744 aa12.38□□□□□ -0.43
TOM1-203ENST00000404284 LY6G5BQ8NDX9 201 aa12.38□□□□□ -0.43
TOM1-203ENST00000404284 SHANK2-AS3Q9BTD1 123 aa12.38□□□□□ -0.43
TOM1-203ENST00000404284 SH2D7A6NKC9 451 aaPredicted RBP12.38□□□□□ -0.43
TOM1-203ENST00000404284 H3BRN7 92 aa12.38□□□□□ -0.43
TOM1-203ENST00000404284 APOHP02749 345 aaPredicted RBP12.38□□□□□ -0.43
TOM1-203ENST00000404284 PRNTQ86SH4 94 aa12.38□□□□□ -0.43
TOM1-203ENST00000404284 SMPXQ9UHP9 88 aa12.38□□□□□ -0.43
TOM1-203ENST00000404284 TRBV19A0A075B6N1 114 aa12.37□□□□□ -0.43
TOM1-203ENST00000404284 TRBV6-1A0A0K0K1D8 114 aa12.37□□□□□ -0.43
TOM1-203ENST00000404284 K7ENP7 123 aa12.37□□□□□ -0.43
TOM1-203ENST00000404284 UQCRFS1P47985 274 aa12.37□□□□□ -0.43
TOM1-203ENST00000404284 C17orf77Q96MU5 243 aa12.37□□□□□ -0.43
TOM1-203ENST00000404284 AP1S3Q96PC3 154 aa12.37□□□□□ -0.43
TOM1-203ENST00000404284 SNAI2O43623 268 aa12.37□□□□□ -0.43
TOM1-203ENST00000404284 CNIH1O95406 144 aa12.37□□□□□ -0.43
TOM1-203ENST00000404284 LIPFP07098 398 aa12.37□□□□□ -0.43
TOM1-203ENST00000404284 FOXE3Q13461 319 aa12.37□□□□□ -0.43
TOM1-203ENST00000404284 SCNM1Q9BWG6 230 aa12.37□□□□□ -0.43
TOM1-203ENST00000404284 FAM90A27PA6NNH2 459 aa12.36□□□□□ -0.43
TOM1-203ENST00000404284 NEGR1Q7Z3B1 354 aa12.36□□□□□ -0.43
TOM1-203ENST00000404284 IGFBPL1Q8WX77 278 aa12.36□□□□□ -0.43
TOM1-203ENST00000404284 CFHR4Q92496 578 aa12.36□□□□□ -0.43
TOM1-203ENST00000404284 JMJD8Q96S16 334 aa12.36□□□□□ -0.43
TOM1-203ENST00000404284 MCRIP2Q9BUT9 160 aaKnown RBP12.36□□□□□ -0.43
TOM1-203ENST00000404284 TPRP12270 2363 aaKnown RBP12.36□□□□□ -0.43
TOM1-203ENST00000404284 SIGLEC15Q6ZMC9 328 aa12.36□□□□□ -0.43
TOM1-203ENST00000404284 ZNF491Q8N8L2 437 aa12.36□□□□□ -0.43
TOM1-203ENST00000404284 ATP6V0BQ99437 205 aa12.36□□□□□ -0.43
TOM1-203ENST00000404284 THYN1Q9P016 225 aa12.36□□□□□ -0.43
TOM1-203ENST00000404284 TLN1Q9Y490 2541 aaKnown RBP12.36□□□□□ -0.43
TOM1-203ENST00000404284 MRPS12O15235 138 aaKnown RBP12.35□□□□□ -0.43
TOM1-203ENST00000404284 NBR2O15453 112 aa12.35□□□□□ -0.43
TOM1-203ENST00000404284 GPR183P32249 361 aa12.35□□□□□ -0.43
TOM1-203ENST00000404284 FAM162BQ5T6X4 162 aa12.35□□□□□ -0.43
TOM1-203ENST00000404284 LINC00173Q6ZV60 143 aa12.35□□□□□ -0.43
TOM1-203ENST00000404284 BPIFA4PQ86YQ2 179 aa12.35□□□□□ -0.43
TOM1-203ENST00000404284 MUC6Q6W4X9 2439 aa12.35□□□□□ -0.43
TOM1-203ENST00000404284 TACC2O95359 2948 aa12.35□□□□□ -0.43
TOM1-203ENST00000404284 DCHS2Q6V1P9 2916 aa12.35□□□□□ -0.43
TOM1-203ENST00000404284 IGHV1-24A0A0C4DH33 117 aa12.35□□□□□ -0.43
TOM1-203ENST00000404284 H3BUT2 72 aa12.35□□□□□ -0.43
TOM1-203ENST00000404284 HAX1O00165 279 aa12.35□□□□□ -0.43
TOM1-203ENST00000404284 LY6HO94772 140 aa12.35□□□□□ -0.43
TOM1-203ENST00000404284 HTR1DP28221 377 aa12.35□□□□□ -0.43
TOM1-203ENST00000404284 HIST1H1AQ02539 215 aaPredicted RBP12.35□□□□□ -0.43
TOM1-203ENST00000404284 FBXL19-AS1Q494R0 122 aa12.35□□□□□ -0.43
TOM1-203ENST00000404284 TMEM75Q8N9X5 138 aa12.35□□□□□ -0.43
TOM1-203ENST00000404284 OR11H6Q8NGC7 330 aa12.35□□□□□ -0.43
TOM1-203ENST00000404284 CHCHD1Q96BP2 118 aaKnown RBP12.35□□□□□ -0.43
TOM1-203ENST00000404284 ARHGAP32A7KAX9 2087 aa12.34□□□□□ -0.43
TOM1-203ENST00000404284 NDUFA3O95167 84 aa12.34□□□□□ -0.43
TOM1-203ENST00000404284 HLA-DRB1P01911 266 aa12.34□□□□□ -0.43
TOM1-203ENST00000404284 RAB9AP51151 201 aa12.34□□□□□ -0.43
TOM1-203ENST00000404284 FOXC1Q12948 553 aa12.34□□□□□ -0.43
TOM1-203ENST00000404284 RNF125Q96EQ8 232 aa12.34□□□□□ -0.43
TOM1-203ENST00000404284 NDFIP1Q9BT67 221 aa12.34□□□□□ -0.43
TOM1-203ENST00000404284 SCRT2Q9NQ03 307 aa12.34□□□□□ -0.43
TOM1-203ENST00000404284 DPM3Q9P2X0 92 aa12.34□□□□□ -0.43
TOM1-203ENST00000404284 HILPDAQ9Y5L2 63 aa12.34□□□□□ -0.43
TOM1-203ENST00000404284 CEACAM3P40198 252 aa12.34□□□□□ -0.43
TOM1-203ENST00000404284 RPL24P83731 157 aaKnown RBP12.34□□□□□ -0.43
TOM1-203ENST00000404284 CFAP161Q6P656 301 aa12.34□□□□□ -0.43
TOM1-203ENST00000404284 NPBQ8NG41 125 aa12.34□□□□□ -0.43
TOM1-203ENST00000404284 TMEM190Q8WZ59 177 aa12.34□□□□□ -0.43
TOM1-203ENST00000404284 SIGMAR1Q99720 223 aa12.34□□□□□ -0.43
TOM1-203ENST00000404284 ASCL2Q99929 193 aa12.34□□□□□ -0.43
TOM1-203ENST00000404284 ANKHD1Q8IWZ3 2542 aaKnown RBP12.34□□□□□ -0.43
TOM1-203ENST00000404284 H0Y8G0 127 aa12.33□□□□□ -0.44
TOM1-203ENST00000404284 CHEK1O14757 476 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms