RNA–Protein interactions for RNA: ENST00000395454.6

SCAF11-204, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF11, Length 1,931 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-204ENST00000395454 Q9H3A6 140 aa11.67□□□□□ -0.54
SCAF11-204ENST00000395454 OSTCQ9NRP0 149 aa11.67□□□□□ -0.54
SCAF11-204ENST00000395454 TRBV19A0A075B6N1 114 aa11.66□□□□□ -0.54
SCAF11-204ENST00000395454 C5orf52A6NGY3 159 aa11.66□□□□□ -0.54
SCAF11-204ENST00000395454 ISLRO14498 428 aa11.66□□□□□ -0.54
SCAF11-204ENST00000395454 S100A9P06702 114 aaKnown RBP11.66□□□□□ -0.54
SCAF11-204ENST00000395454 PPIFP30405 207 aaKnown RBP11.66□□□□□ -0.54
SCAF11-204ENST00000395454 BLNKQ8WV28 456 aa11.66□□□□□ -0.54
SCAF11-204ENST00000395454 EEF1AKMT3Q96AZ1 226 aa11.66□□□□□ -0.54
SCAF11-204ENST00000395454 C16orf95Q9H693 158 aa11.66□□□□□ -0.54
SCAF11-204ENST00000395454 ZFAND3Q9H8U3 227 aa11.66□□□□□ -0.54
SCAF11-204ENST00000395454 PGPA6NDG6 321 aa11.66□□□□□ -0.54
SCAF11-204ENST00000395454 KRTAP24-1Q3LI83 254 aa11.66□□□□□ -0.54
SCAF11-204ENST00000395454 V9GYV3 84 aa11.66□□□□□ -0.54
SCAF11-204ENST00000395454 TRBV6-1A0A0K0K1D8 114 aa11.65□□□□□ -0.54
SCAF11-204ENST00000395454 HAX1O00165 279 aa11.65□□□□□ -0.54
SCAF11-204ENST00000395454 IGHV3-23P01764 117 aa11.65□□□□□ -0.54
SCAF11-204ENST00000395454 TCRAP04437 139 aa11.65□□□□□ -0.54
SCAF11-204ENST00000395454 SLC25A5P05141 298 aaKnown RBP11.65□□□□□ -0.54
SCAF11-204ENST00000395454 S100A7P31151 101 aa11.65□□□□□ -0.54
SCAF11-204ENST00000395454 OR4F17Q8NGA8 305 aa11.65□□□□□ -0.54
SCAF11-204ENST00000395454 RNF114Q9Y508 228 aa11.65□□□□□ -0.54
SCAF11-204ENST00000395454 GPR183P32249 361 aa11.64□□□□□ -0.55
SCAF11-204ENST00000395454 FAM3BP58499 235 aaPredicted RBP11.64□□□□□ -0.55
SCAF11-204ENST00000395454 SIGLEC15Q6ZMC9 328 aa11.64□□□□□ -0.55
SCAF11-204ENST00000395454 FAM231DQ6ZW35 169 aa11.64□□□□□ -0.55
SCAF11-204ENST00000395454 FMC1Q96HJ9 113 aa11.64□□□□□ -0.55
SCAF11-204ENST00000395454 LINC00479Q96M42 142 aa11.64□□□□□ -0.55
SCAF11-204ENST00000395454 IL36BQ9NZH7 164 aa11.64□□□□□ -0.55
SCAF11-204ENST00000395454 CLPSL1A2RUU4 121 aa11.64□□□□□ -0.55
SCAF11-204ENST00000395454 PPP5D1E7EU14 171 aa11.64□□□□□ -0.55
SCAF11-204ENST00000395454 BMPR1BO00238 502 aa11.64□□□□□ -0.55
SCAF11-204ENST00000395454 UBE2CO00762 179 aa11.64□□□□□ -0.55
SCAF11-204ENST00000395454 TRGC2P03986 189 aa11.64□□□□□ -0.55
SCAF11-204ENST00000395454 CFHR3Q02985 330 aa11.64□□□□□ -0.55
SCAF11-204ENST00000395454 ARL6IP6Q8N6S5 226 aa11.64□□□□□ -0.55
SCAF11-204ENST00000395454 MLST8Q9BVC4 326 aa11.64□□□□□ -0.55
SCAF11-204ENST00000395454 A0A1W2PPQ1 181 aa11.63□□□□□ -0.55
SCAF11-204ENST00000395454 CLEC3BP05452 202 aa11.63□□□□□ -0.55
SCAF11-204ENST00000395454 RPL7P18124 248 aaKnown RBP11.63□□□□□ -0.55
SCAF11-204ENST00000395454 GNG5P63218 68 aa11.63□□□□□ -0.55
SCAF11-204ENST00000395454 C10orf99Q6UWK7 81 aa11.63□□□□□ -0.55
SCAF11-204ENST00000395454 TOMM20LQ6UXN7 152 aa11.63□□□□□ -0.55
SCAF11-204ENST00000395454 KLHDC1Q8N7A1 406 aa11.63□□□□□ -0.55
SCAF11-204ENST00000395454 RABAC1Q9UI14 185 aa11.63□□□□□ -0.55
SCAF11-204ENST00000395454 HIST1H2BKO60814 126 aa11.62□□□□□ -0.55
SCAF11-204ENST00000395454 ZNF253O75346 499 aa11.62□□□□□ -0.55
SCAF11-204ENST00000395454 LTAP01374 205 aa11.62□□□□□ -0.55
SCAF11-204ENST00000395454 IGLV1-40P01703 118 aa11.62□□□□□ -0.55
SCAF11-204ENST00000395454 HIST1H2BJP06899 126 aa11.62□□□□□ -0.55
SCAF11-204ENST00000395454 HIST1H2BOP23527 126 aa11.62□□□□□ -0.55
SCAF11-204ENST00000395454 HIST1H2BBP33778 126 aa11.62□□□□□ -0.55
SCAF11-204ENST00000395454 RAB9AP51151 201 aa11.62□□□□□ -0.55
SCAF11-204ENST00000395454 HIST1H2BDP58876 126 aa11.62□□□□□ -0.55
SCAF11-204ENST00000395454 ERVFC1-1P60608 527 aa11.62□□□□□ -0.55
SCAF11-204ENST00000395454 HIST1H2BCP62807 126 aa11.62□□□□□ -0.55
SCAF11-204ENST00000395454 SLC35B1P78383 322 aa11.62□□□□□ -0.55
SCAF11-204ENST00000395454 ATP5G2Q06055 141 aa11.62□□□□□ -0.55
SCAF11-204ENST00000395454 OR5I1Q13606 314 aa11.62□□□□□ -0.55
SCAF11-204ENST00000395454 HIST2H2BEQ16778 126 aa11.62□□□□□ -0.55
SCAF11-204ENST00000395454 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.62□□□□□ -0.55
SCAF11-204ENST00000395454 BAGE2Q86Y30 109 aa11.62□□□□□ -0.55
SCAF11-204ENST00000395454 HIST1H2BHQ93079 126 aa11.62□□□□□ -0.55
SCAF11-204ENST00000395454 GPR82Q96P67 336 aa11.62□□□□□ -0.55
SCAF11-204ENST00000395454 HIST1H2BNQ99877 126 aa11.62□□□□□ -0.55
SCAF11-204ENST00000395454 HIST1H2BMQ99879 126 aa11.62□□□□□ -0.55
SCAF11-204ENST00000395454 TENM1Q9UKZ4 2725 aa11.62□□□□□ -0.55
SCAF11-204ENST00000395454 SNRPCP09234 159 aaKnown RBP11.62□□□□□ -0.55
SCAF11-204ENST00000395454 USMG5Q96IX5 58 aa11.62□□□□□ -0.55
SCAF11-204ENST00000395454 SAV1Q9H4B6 383 aaPredicted RBP11.62□□□□□ -0.55
SCAF11-204ENST00000395454 COL6A5A8TX70 2615 aa11.62□□□□□ -0.55
SCAF11-204ENST00000395454 A0A1B0GUS0 222 aa11.61□□□□□ -0.55
SCAF11-204ENST00000395454 IGLV2-11P01706 119 aa11.61□□□□□ -0.55
SCAF11-204ENST00000395454 TMEM158Q8WZ71 300 aa11.61□□□□□ -0.55
SCAF11-204ENST00000395454 TRAV34A0A0B4J273 112 aa11.6□□□□□ -0.55
SCAF11-204ENST00000395454 ZNF320A2RRD8 509 aa11.6□□□□□ -0.55
SCAF11-204ENST00000395454 TMEM89A2RUT3 159 aa11.6□□□□□ -0.55
SCAF11-204ENST00000395454 H3BTX0 84 aa11.6□□□□□ -0.55
SCAF11-204ENST00000395454 SLC17A3O00476 420 aa11.6□□□□□ -0.55
SCAF11-204ENST00000395454 S100A6P06703 90 aa11.6□□□□□ -0.55
SCAF11-204ENST00000395454 PROK1P58294 105 aa11.6□□□□□ -0.55
SCAF11-204ENST00000395454 UBE2G1P62253 170 aa11.6□□□□□ -0.55
SCAF11-204ENST00000395454 SNRPEP62304 92 aaKnown RBP11.6□□□□□ -0.55
SCAF11-204ENST00000395454 RELQ04864 619 aaPredicted RBP11.6□□□□□ -0.55
SCAF11-204ENST00000395454 ACTL10Q5JWF8 245 aa11.6□□□□□ -0.55
SCAF11-204ENST00000395454 IBA57Q5T440 356 aaKnown RBP11.6□□□□□ -0.55
SCAF11-204ENST00000395454 CLEC19AQ6UXS0 136 aa11.6□□□□□ -0.55
SCAF11-204ENST00000395454 FRZBQ92765 325 aa11.6□□□□□ -0.55
SCAF11-204ENST00000395454 C17orf77Q96MU5 243 aa11.6□□□□□ -0.55
SCAF11-204ENST00000395454 MS4A10Q96PG2 267 aa11.6□□□□□ -0.55
SCAF11-204ENST00000395454 A0A087X0K7 114 aa11.6□□□□□ -0.55
SCAF11-204ENST00000395454 BUB3O43684 328 aa11.6□□□□□ -0.55
SCAF11-204ENST00000395454 TRGV3P03979 118 aa11.6□□□□□ -0.55
SCAF11-204ENST00000395454 EXOC3-AS1Q8N2X6 119 aa11.6□□□□□ -0.55
SCAF11-204ENST00000395454 TMEM75Q8N9X5 138 aa11.6□□□□□ -0.55
SCAF11-204ENST00000395454 RNASE7Q9H1E1 156 aaKnown RBP11.6□□□□□ -0.55
SCAF11-204ENST00000395454 U3KQE9 123 aa11.6□□□□□ -0.55
SCAF11-204ENST00000395454 IGHG4P01861 327 aa11.59□□□□□ -0.55
SCAF11-204ENST00000395454 PF4V1P10720 104 aa11.59□□□□□ -0.55
SCAF11-204ENST00000395454 RPEL1Q2QD12 228 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 106.9 ms