RNA–Protein interactions for RNA: ENST00000384161.1

RNU6-48P-201, Transcript of RNA, U6 small nuclear 48, pseudogene, humanhuman

BASIC

Gene RNU6-48P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-48P-201ENST00000384161 SLAMF6Q96DU3 332 aa0.36□□□□□ -2.35
RNU6-48P-201ENST00000384161 ADAT3Q96EY9 351 aaPredicted RBP0.36□□□□□ -2.35
RNU6-48P-201ENST00000384161 YPEL2Q96QA6 119 aa0.36□□□□□ -2.35
RNU6-48P-201ENST00000384161 TMEM133Q9H2Q1 129 aa0.36□□□□□ -2.35
RNU6-48P-201ENST00000384161 CTNNBIP1Q9NSA3 81 aaPredicted RBP0.36□□□□□ -2.35
RNU6-48P-201ENST00000384161 FBXO5Q9UKT4 447 aa0.36□□□□□ -2.35
RNU6-48P-201ENST00000384161 FMN1Q68DA7 1419 aa0.36□□□□□ -2.35
RNU6-48P-201ENST00000384161 FRAS1Q86XX4 4008 aa0.35□□□□□ -2.35
RNU6-48P-201ENST00000384161 HRNRQ86YZ3 2850 aaPredicted RBP0.35□□□□□ -2.35
RNU6-48P-201ENST00000384161 PLB1Q6P1J6 1458 aa0.35□□□□□ -2.35
RNU6-48P-201ENST00000384161 CICQ96RK0 1608 aaPredicted RBP0.35□□□□□ -2.35
RNU6-48P-201ENST00000384161 PIK3C2AO00443 1686 aa0.35□□□□□ -2.35
RNU6-48P-201ENST00000384161 IGLV3-32A0A0A0MS00 114 aa0.35□□□□□ -2.35
RNU6-48P-201ENST00000384161 TRGV10A0A0A0MS01 117 aa0.35□□□□□ -2.35
RNU6-48P-201ENST00000384161 TCRBV4S1A1TA0A5B7 111 aa0.35□□□□□ -2.35
RNU6-48P-201ENST00000384161 DNAL4O96015 105 aa0.35□□□□□ -2.35
RNU6-48P-201ENST00000384161 SMIM17P0DL12 118 aa0.35□□□□□ -2.35
RNU6-48P-201ENST00000384161 EFNA4P52798 201 aa0.35□□□□□ -2.35
RNU6-48P-201ENST00000384161 OR51A2Q8NGJ7 313 aa0.35□□□□□ -2.35
RNU6-48P-201ENST00000384161 SLC25A40Q8TBP6 338 aa0.35□□□□□ -2.35
RNU6-48P-201ENST00000384161 TP53RKQ96S44 253 aa0.35□□□□□ -2.35
RNU6-48P-201ENST00000384161 PRADC1Q9BSG0 188 aa0.35□□□□□ -2.35
RNU6-48P-201ENST00000384161 PARD6GQ9BYG4 376 aaPredicted RBP0.35□□□□□ -2.35
RNU6-48P-201ENST00000384161 UBAP1Q9NZ09 502 aa0.35□□□□□ -2.35
RNU6-48P-201ENST00000384161 GLTPQ9NZD2 209 aa0.35□□□□□ -2.35
RNU6-48P-201ENST00000384161 ORMDL1Q9P0S3 153 aa0.35□□□□□ -2.35
RNU6-48P-201ENST00000384161 MYCBP2O75592 4640 aa0.35□□□□□ -2.35
RNU6-48P-201ENST00000384161 RBBP6Q7Z6E9 1792 aaKnown RBP0.34□□□□□ -2.35
RNU6-48P-201ENST00000384161 IGHV1-58A0A0C4DH39 117 aa0.34□□□□□ -2.36
RNU6-48P-201ENST00000384161 SMIM9A6NGZ8 99 aa0.34□□□□□ -2.36
RNU6-48P-201ENST00000384161 A8MWV9 139 aa0.34□□□□□ -2.36
RNU6-48P-201ENST00000384161 NUPR1O60356 82 aa0.34□□□□□ -2.36
RNU6-48P-201ENST00000384161 GADD45GO95257 159 aa0.34□□□□□ -2.36
RNU6-48P-201ENST00000384161 HAND1O96004 215 aa0.34□□□□□ -2.36
RNU6-48P-201ENST00000384161 RPS17P08708 135 aaKnown RBP0.34□□□□□ -2.36
RNU6-48P-201ENST00000384161 SRP14P37108 136 aaKnown RBP0.34□□□□□ -2.36
RNU6-48P-201ENST00000384161 RANP62826 216 aaKnown RBP0.34□□□□□ -2.36
RNU6-48P-201ENST00000384161 DYNLT1P63172 113 aa0.34□□□□□ -2.36
RNU6-48P-201ENST00000384161 AESQ08117 197 aa0.34□□□□□ -2.36
RNU6-48P-201ENST00000384161 LELP1Q5T871 98 aa0.34□□□□□ -2.36
RNU6-48P-201ENST00000384161 CSPG4Q6UVK1 2322 aa0.34□□□□□ -2.36
RNU6-48P-201ENST00000384161 LINC00575Q6W349 94 aa0.34□□□□□ -2.36
RNU6-48P-201ENST00000384161 DEFB132Q7Z7B7 95 aa0.34□□□□□ -2.36
RNU6-48P-201ENST00000384161 OR8J2Q8NGG1 315 aa0.34□□□□□ -2.36
RNU6-48P-201ENST00000384161 OR52L1Q8NGH7 329 aa0.34□□□□□ -2.36
RNU6-48P-201ENST00000384161 CANT1Q8WVQ1 401 aa0.34□□□□□ -2.36
RNU6-48P-201ENST00000384161 C14orf105Q9NVL8 296 aa0.34□□□□□ -2.36
RNU6-48P-201ENST00000384161 IDI2-AS1Q9NZ38 188 aa0.34□□□□□ -2.36
RNU6-48P-201ENST00000384161 CHCHD2Q9Y6H1 151 aaPredicted RBP0.34□□□□□ -2.36
RNU6-48P-201ENST00000384161 PTPRFP10586 1907 aa0.34□□□□□ -2.36
RNU6-48P-201ENST00000384161 ZCCHC6Q5VYS8 1495 aaKnown RBP0.34□□□□□ -2.36
RNU6-48P-201ENST00000384161 SLIT1O75093 1534 aa0.33□□□□□ -2.36
RNU6-48P-201ENST00000384161 TLCD2A6NGC4 264 aa0.33□□□□□ -2.36
RNU6-48P-201ENST00000384161 TIMM17BO60830 172 aa0.33□□□□□ -2.36
RNU6-48P-201ENST00000384161 LYPLA2O95372 231 aa0.33□□□□□ -2.36
RNU6-48P-201ENST00000384161 TCRBP04435 133 aa0.33□□□□□ -2.36
RNU6-48P-201ENST00000384161 RNASE4P34096 147 aaKnown RBP0.33□□□□□ -2.36
RNU6-48P-201ENST00000384161 MYL5Q02045 173 aa0.33□□□□□ -2.36
RNU6-48P-201ENST00000384161 KRR1Q13601 381 aaKnown RBP0.33□□□□□ -2.36
RNU6-48P-201ENST00000384161 SPRNQ5BIV9 151 aa0.33□□□□□ -2.36
RNU6-48P-201ENST00000384161 C22orf39Q6P5X5 142 aa0.33□□□□□ -2.36
RNU6-48P-201ENST00000384161 HAGHLQ6PII5 290 aaPredicted RBP0.33□□□□□ -2.36
RNU6-48P-201ENST00000384161 C4orf22Q6V702 233 aa0.33□□□□□ -2.36
RNU6-48P-201ENST00000384161 GRINAQ7Z429 371 aa0.33□□□□□ -2.36
RNU6-48P-201ENST00000384161 OTUD6BQ8N6M0 293 aa0.33□□□□□ -2.36
RNU6-48P-201ENST00000384161 OR2T35Q8NGX2 323 aa0.33□□□□□ -2.36
RNU6-48P-201ENST00000384161 GNPDA2Q8TDQ7 276 aa0.33□□□□□ -2.36
RNU6-48P-201ENST00000384161 ZNF431Q8TF32 576 aaPredicted RBP0.33□□□□□ -2.36
RNU6-48P-201ENST00000384161 BTF3L4Q96K17 158 aa0.33□□□□□ -2.36
RNU6-48P-201ENST00000384161 C10orf95Q9H7T3 257 aa0.33□□□□□ -2.36
RNU6-48P-201ENST00000384161 PARVBQ9HBI1 364 aa0.33□□□□□ -2.36
RNU6-48P-201ENST00000384161 UQCC1Q9NVA1 299 aa0.33□□□□□ -2.36
RNU6-48P-201ENST00000384161 TNFSF18Q9UNG2 199 aa0.33□□□□□ -2.36
RNU6-48P-201ENST00000384161 PRELID3BQ9Y3B1 194 aa0.33□□□□□ -2.36
RNU6-48P-201ENST00000384161 ALMS1Q8TCU4 4167 aa0.33□□□□□ -2.36
RNU6-48P-201ENST00000384161 BCL9LQ86UU0 1499 aa0.33□□□□□ -2.36
RNU6-48P-201ENST00000384161 KCPQ6ZWJ8 1503 aa0.33□□□□□ -2.36
RNU6-48P-201ENST00000384161 LRP1BQ9NZR2 4599 aa0.32□□□□□ -2.36
RNU6-48P-201ENST00000384161 CITO14578 2027 aa0.32□□□□□ -2.36
RNU6-48P-201ENST00000384161 IGLV3-1P01715 115 aa0.32□□□□□ -2.36
RNU6-48P-201ENST00000384161 ERP29P30040 261 aaKnown RBP0.32□□□□□ -2.36
RNU6-48P-201ENST00000384161 LSM6P62312 80 aaKnown RBP0.32□□□□□ -2.36
RNU6-48P-201ENST00000384161 SPA17Q15506 151 aa0.32□□□□□ -2.36
RNU6-48P-201ENST00000384161 KRTAP21-1Q3LI58 79 aa0.32□□□□□ -2.36
RNU6-48P-201ENST00000384161 BCL2L15Q5TBC7 163 aa0.32□□□□□ -2.36
RNU6-48P-201ENST00000384161 ZNF833PQ6ZTB9 187 aa0.32□□□□□ -2.36
RNU6-48P-201ENST00000384161 LINC00052Q96N35 136 aa0.32□□□□□ -2.36
RNU6-48P-201ENST00000384161 PRRT1Q99946 306 aa0.32□□□□□ -2.36
RNU6-48P-201ENST00000384161 KIFC1Q9BW19 673 aa0.32□□□□□ -2.36
RNU6-48P-201ENST00000384161 SLC22A13Q9Y226 551 aa0.32□□□□□ -2.36
RNU6-48P-201ENST00000384161 PKHD1P08F94 4074 aa0.32□□□□□ -2.36
RNU6-48P-201ENST00000384161 PCF11O94913 1555 aaKnown RBP0.32□□□□□ -2.36
RNU6-48P-201ENST00000384161 UNC13CQ8NB66 2214 aa0.32□□□□□ -2.36
RNU6-48P-201ENST00000384161 NUP98P52948 1817 aa0.31□□□□□ -2.36
RNU6-48P-201ENST00000384161 PHRF1Q9P1Y6 1649 aaKnown RBP0.31□□□□□ -2.36
RNU6-48P-201ENST00000384161 YTHDC2Q9H6S0 1430 aaKnown RBP0.31□□□□□ -2.36
RNU6-48P-201ENST00000384161 STARD9Q9P2P6 4700 aa0.31□□□□□ -2.36
RNU6-48P-201ENST00000384161 LRP2P98164 4655 aa0.31□□□□□ -2.36
RNU6-48P-201ENST00000384161 TRBV19A0A075B6N1 114 aa0.31□□□□□ -2.36
RNU6-48P-201ENST00000384161 TRAV4A0A0B4J268 109 aa0.31□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms