RNA–Protein interactions for RNA: ENST00000380701.7

CCDC171-201, Transcript of coiled-coil domain containing 171, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC171, Length 6,512 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-201ENST00000380701 SPCS1Q9Y6A9 102 aa5.77□□□□□ -1.49
CCDC171-201ENST00000380701 DOCK4Q8N1I0 1966 aa5.77□□□□□ -1.49
CCDC171-201ENST00000380701 LCTP09848 1927 aa5.76□□□□□ -1.49
CCDC171-201ENST00000380701 K7EMI3 77 aa5.76□□□□□ -1.49
CCDC171-201ENST00000380701 EVI2AP22794 236 aa5.76□□□□□ -1.49
CCDC171-201ENST00000380701 RHOHQ15669 191 aa5.76□□□□□ -1.49
CCDC171-201ENST00000380701 C1orf159Q96HA4 380 aa5.76□□□□□ -1.49
CCDC171-201ENST00000380701 LYL1P12980 280 aa5.76□□□□□ -1.49
CCDC171-201ENST00000380701 VWC2Q2TAL6 325 aa5.76□□□□□ -1.49
CCDC171-201ENST00000380701 OR11H6Q8NGC7 330 aa5.76□□□□□ -1.49
CCDC171-201ENST00000380701 ST6GALNAC6Q969X2 333 aa5.76□□□□□ -1.49
CCDC171-201ENST00000380701 CSTL1Q9H114 145 aa5.76□□□□□ -1.49
CCDC171-201ENST00000380701 A0A087WV48 116 aa5.76□□□□□ -1.49
CCDC171-201ENST00000380701 I3L3M4 83 aa5.76□□□□□ -1.49
CCDC171-201ENST00000380701 SERF1AO75920 110 aa5.76□□□□□ -1.49
CCDC171-201ENST00000380701 PPIFP30405 207 aaKnown RBP5.76□□□□□ -1.49
CCDC171-201ENST00000380701 BTCP35070 178 aa5.76□□□□□ -1.49
CCDC171-201ENST00000380701 NKAPP1Q8N9T2 125 aa5.76□□□□□ -1.49
CCDC171-201ENST00000380701 ZNF48Q96MX3 618 aaPredicted RBP5.76□□□□□ -1.49
CCDC171-201ENST00000380701 GFI1Q99684 422 aa5.76□□□□□ -1.49
CCDC171-201ENST00000380701 TIMM21Q9BVV7 248 aa5.76□□□□□ -1.49
CCDC171-201ENST00000380701 H0YIZ8 118 aa5.76□□□□□ -1.49
CCDC171-201ENST00000380701 MYCNOSP40205 109 aa5.76□□□□□ -1.49
CCDC171-201ENST00000380701 UBE2E2Q96LR5 201 aa5.76□□□□□ -1.49
CCDC171-201ENST00000380701 TRAV2A0A0B4J234 112 aa5.76□□□□□ -1.49
CCDC171-201ENST00000380701 Q5BKY6 102 aa5.76□□□□□ -1.49
CCDC171-201ENST00000380701 BOD1L2Q8IYS8 172 aa5.76□□□□□ -1.49
CCDC171-201ENST00000380701 ORAOV1Q8WV07 137 aa5.76□□□□□ -1.49
CCDC171-201ENST00000380701 ANAPC10Q9UM13 185 aa5.76□□□□□ -1.49
CCDC171-201ENST00000380701 LSM4Q9Y4Z0 139 aaKnown RBP5.76□□□□□ -1.49
CCDC171-201ENST00000380701 PRSS46E5RG02 174 aa5.75□□□□□ -1.49
CCDC171-201ENST00000380701 KLF17Q5JT82 389 aaPredicted RBP5.75□□□□□ -1.49
CCDC171-201ENST00000380701 RUSC1-AS1Q66K80 236 aa5.75□□□□□ -1.49
CCDC171-201ENST00000380701 NIT1Q86X76 327 aa5.75□□□□□ -1.49
CCDC171-201ENST00000380701 BCL6BQ8N143 479 aaPredicted RBP5.75□□□□□ -1.49
CCDC171-201ENST00000380701 EXOC3-AS1Q8N2X6 119 aa5.75□□□□□ -1.49
CCDC171-201ENST00000380701 PYGO2Q9BRQ0 406 aa5.75□□□□□ -1.49
CCDC171-201ENST00000380701 TRAV5A0A0B4J249 113 aa5.75□□□□□ -1.49
CCDC171-201ENST00000380701 AZU1P20160 251 aa5.75□□□□□ -1.49
CCDC171-201ENST00000380701 LINC01551Q86U37 167 aa5.75□□□□□ -1.49
CCDC171-201ENST00000380701 PRIMA1Q86XR5 153 aa5.75□□□□□ -1.49
CCDC171-201ENST00000380701 TRBV19A0A075B6N1 114 aa5.75□□□□□ -1.49
CCDC171-201ENST00000380701 MUC21A0A0G2JKD1 596 aa5.75□□□□□ -1.49
CCDC171-201ENST00000380701 MUC21A0A140T8X8 626 aa5.75□□□□□ -1.49
CCDC171-201ENST00000380701 RBAKDNA6NC62 111 aa5.75□□□□□ -1.49
CCDC171-201ENST00000380701 NDPQ00604 133 aa5.75□□□□□ -1.49
CCDC171-201ENST00000380701 MRPL52Q86TS9 123 aaKnown RBP5.75□□□□□ -1.49
CCDC171-201ENST00000380701 PROK2Q9HC23 129 aa5.75□□□□□ -1.49
CCDC171-201ENST00000380701 KLK5Q9Y337 293 aaPredicted RBP5.75□□□□□ -1.49
CCDC171-201ENST00000380701 D6R8Y8 96 aa5.74□□□□□ -1.49
CCDC171-201ENST00000380701 H3BRN7 92 aa5.74□□□□□ -1.49
CCDC171-201ENST00000380701 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP5.74□□□□□ -1.49
CCDC171-201ENST00000380701 K7EM74 188 aa5.74□□□□□ -1.49
CCDC171-201ENST00000380701 TFF1P04155 84 aa5.74□□□□□ -1.49
CCDC171-201ENST00000380701 ARMS2P0C7Q2 107 aa5.74□□□□□ -1.49
CCDC171-201ENST00000380701 NTF4P34130 210 aa5.74□□□□□ -1.49
CCDC171-201ENST00000380701 TMEM249Q2WGJ8 235 aa5.74□□□□□ -1.49
CCDC171-201ENST00000380701 LINC00518Q8N0U6 118 aa5.74□□□□□ -1.49
CCDC171-201ENST00000380701 RPP25LQ8N5L8 163 aaKnown RBP5.74□□□□□ -1.49
CCDC171-201ENST00000380701 SPANXA1Q9NS26 97 aa5.74□□□□□ -1.49
CCDC171-201ENST00000380701 CD300EQ496F6 205 aaPredicted RBP5.74□□□□□ -1.49
CCDC171-201ENST00000380701 IGFBPL1Q8WX77 278 aa5.74□□□□□ -1.49
CCDC171-201ENST00000380701 RIF1Q5UIP0 2472 aaKnown RBP5.74□□□□□ -1.49
CCDC171-201ENST00000380701 PTPRFP10586 1907 aa5.74□□□□□ -1.49
CCDC171-201ENST00000380701 FAM231DQ6ZW35 169 aa5.74□□□□□ -1.49
CCDC171-201ENST00000380701 THAP8Q8NA92 274 aa5.74□□□□□ -1.49
CCDC171-201ENST00000380701 SSBP4Q9BWG4 385 aaPredicted RBP5.74□□□□□ -1.49
CCDC171-201ENST00000380701 CKAP5Q14008 2032 aa5.74□□□□□ -1.49
CCDC171-201ENST00000380701 CACNA1BQ00975 2339 aa5.74□□□□□ -1.49
CCDC171-201ENST00000380701 ADMP35318 185 aa5.74□□□□□ -1.49
CCDC171-201ENST00000380701 C10orf105Q8TEF2 133 aa5.74□□□□□ -1.49
CCDC171-201ENST00000380701 TRAV3A0A0B4J244 114 aa5.74□□□□□ -1.49
CCDC171-201ENST00000380701 HOXD3P31249 432 aaPredicted RBP5.74□□□□□ -1.49
CCDC171-201ENST00000380701 Q6ZR03 302 aa5.74□□□□□ -1.49
CCDC171-201ENST00000380701 Q6ZWC4 215 aa5.74□□□□□ -1.49
CCDC171-201ENST00000380701 C14orf178Q8N769 122 aaPredicted RBP5.74□□□□□ -1.49
CCDC171-201ENST00000380701 XCL2Q9UBD3 114 aa5.74□□□□□ -1.49
CCDC171-201ENST00000380701 HEATR5BQ9P2D3 2071 aa5.74□□□□□ -1.49
CCDC171-201ENST00000380701 SHISA9B4DS77 424 aa5.74□□□□□ -1.49
CCDC171-201ENST00000380701 PRB3Q04118 309 aaPredicted RBP5.74□□□□□ -1.49
CCDC171-201ENST00000380701 C17orf58Q2M2W7 97 aa5.74□□□□□ -1.49
CCDC171-201ENST00000380701 ZNF114Q8NC26 417 aa5.74□□□□□ -1.49
CCDC171-201ENST00000380701 LAMTOR3Q9UHA4 124 aa5.74□□□□□ -1.49
CCDC171-201ENST00000380701 C8orf86Q6ZUL3 223 aa5.73□□□□□ -1.49
CCDC171-201ENST00000380701 TM2D2Q9BX73 214 aa5.73□□□□□ -1.49
CCDC171-201ENST00000380701 WFDC1Q9HC57 220 aa5.73□□□□□ -1.49
CCDC171-201ENST00000380701 VWC2LB2RUY7 222 aa5.73□□□□□ -1.49
CCDC171-201ENST00000380701 RTTNQ86VV8 2226 aa5.73□□□□□ -1.49
CCDC171-201ENST00000380701 MYOFQ9NZM1 2061 aa5.73□□□□□ -1.49
CCDC171-201ENST00000380701 CCL24O00175 119 aa5.73□□□□□ -1.49
CCDC171-201ENST00000380701 IGHV3-53P01767 116 aa5.73□□□□□ -1.49
CCDC171-201ENST00000380701 Q8NFD4 153 aa5.73□□□□□ -1.49
CCDC171-201ENST00000380701 C20orf78Q9BR46 151 aa5.73□□□□□ -1.49
CCDC171-201ENST00000380701 PIKFYVEQ9Y2I7 2098 aa5.73□□□□□ -1.49
CCDC171-201ENST00000380701 PDCD11Q14690 1871 aaKnown RBP5.73□□□□□ -1.49
CCDC171-201ENST00000380701 IGHV1-24A0A0C4DH33 117 aa5.73□□□□□ -1.49
CCDC171-201ENST00000380701 IGKV1-16P04430 117 aa5.73□□□□□ -1.49
CCDC171-201ENST00000380701 CCL18P55774 89 aa5.73□□□□□ -1.49
CCDC171-201ENST00000380701 LHFPL4Q7Z7J7 247 aa5.73□□□□□ -1.49
CCDC171-201ENST00000380701 ZNF479Q96JC4 524 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms