RNA–Protein interactions for RNA: ENST00000378679.7

SHROOM1-203, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHROOM1, Length 4,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-203ENST00000378679 ATP6V0E1O15342 81 aa11.37□□□□□ -0.59
SHROOM1-203ENST00000378679 LEPROTL1O95214 131 aa11.37□□□□□ -0.59
SHROOM1-203ENST00000378679 RPP21Q9H633 154 aaKnown RBP11.37□□□□□ -0.59
SHROOM1-203ENST00000378679 POLR3KQ9Y2Y1 108 aaPredicted RBP11.37□□□□□ -0.59
SHROOM1-203ENST00000378679 HBBP68871 147 aa11.37□□□□□ -0.59
SHROOM1-203ENST00000378679 SRSF8Q9BRL6 282 aaKnown RBP11.37□□□□□ -0.59
SHROOM1-203ENST00000378679 TMEM116Q8NCL8 245 aa11.36□□□□□ -0.59
SHROOM1-203ENST00000378679 DDB2Q92466 427 aa11.36□□□□□ -0.59
SHROOM1-203ENST00000378679 MAP1LC3CQ9BXW4 147 aa11.36□□□□□ -0.59
SHROOM1-203ENST00000378679 MUC3AQ02505 3323 aa11.36□□□□□ -0.59
SHROOM1-203ENST00000378679 PRSS47A8MTI9 375 aa11.36□□□□□ -0.59
SHROOM1-203ENST00000378679 CIARTQ8N365 385 aaPredicted RBP11.36□□□□□ -0.59
SHROOM1-203ENST00000378679 OSTCQ9NRP0 149 aa11.36□□□□□ -0.59
SHROOM1-203ENST00000378679 A0A1B0GUT8 65 aa11.36□□□□□ -0.59
SHROOM1-203ENST00000378679 NDUFB8O95169 186 aa11.36□□□□□ -0.59
SHROOM1-203ENST00000378679 SRD5A1P18405 259 aa11.36□□□□□ -0.59
SHROOM1-203ENST00000378679 TCF24Q7RTU0 167 aa11.36□□□□□ -0.59
SHROOM1-203ENST00000378679 GLMPQ8WWB7 406 aa11.36□□□□□ -0.59
SHROOM1-203ENST00000378679 SLC50A1Q9BRV3 221 aa11.36□□□□□ -0.59
SHROOM1-203ENST00000378679 J3QKU1 62 aa11.35□□□□□ -0.59
SHROOM1-203ENST00000378679 ZNF726P1Q15940 193 aa11.35□□□□□ -0.59
SHROOM1-203ENST00000378679 C1orf194Q5T5A4 169 aa11.35□□□□□ -0.59
SHROOM1-203ENST00000378679 JKAMPQ9P055 326 aa11.35□□□□□ -0.59
SHROOM1-203ENST00000378679 DSPP15924 2871 aaKnown RBP11.35□□□□□ -0.59
SHROOM1-203ENST00000378679 C2CD3Q4AC94 2353 aa11.35□□□□□ -0.59
SHROOM1-203ENST00000378679 IGHV4-61A0A0C4DH41 118 aa11.35□□□□□ -0.59
SHROOM1-203ENST00000378679 GATA3P23771 443 aa11.35□□□□□ -0.59
SHROOM1-203ENST00000378679 FAM159AQ6UWV7 190 aa11.35□□□□□ -0.59
SHROOM1-203ENST00000378679 TRBV9A0A0B4J1U6 114 aa11.35□□□□□ -0.59
SHROOM1-203ENST00000378679 RIPPLY3P57055 190 aa11.35□□□□□ -0.59
SHROOM1-203ENST00000378679 TRAV8-1A0A0A6YYK1 113 aa11.34□□□□□ -0.59
SHROOM1-203ENST00000378679 M0R3E3 92 aa11.34□□□□□ -0.59
SHROOM1-203ENST00000378679 TSPOP30536 169 aa11.34□□□□□ -0.59
SHROOM1-203ENST00000378679 C1orf122Q6ZSJ8 110 aa11.34□□□□□ -0.59
SHROOM1-203ENST00000378679 IGLV2-14P01704 120 aa11.34□□□□□ -0.59
SHROOM1-203ENST00000378679 IGHV4-39P01824 125 aa11.34□□□□□ -0.59
SHROOM1-203ENST00000378679 NDPQ00604 133 aa11.34□□□□□ -0.59
SHROOM1-203ENST00000378679 DGAT2L7PQ6IED9 249 aa11.34□□□□□ -0.59
SHROOM1-203ENST00000378679 SLC25A34Q6PIV7 304 aa11.34□□□□□ -0.59
SHROOM1-203ENST00000378679 C8orf31Q8N9H6 132 aa11.34□□□□□ -0.59
SHROOM1-203ENST00000378679 NRGNQ92686 78 aa11.34□□□□□ -0.59
SHROOM1-203ENST00000378679 C5orf30Q96GV9 206 aa11.34□□□□□ -0.59
SHROOM1-203ENST00000378679 LINC00479Q96M42 142 aa11.34□□□□□ -0.59
SHROOM1-203ENST00000378679 PRORYQ9H606 182 aa11.34□□□□□ -0.59
SHROOM1-203ENST00000378679 PSMB11A5LHX3 300 aa11.34□□□□□ -0.59
SHROOM1-203ENST00000378679 CDC42EP3Q9UKI2 254 aa11.34□□□□□ -0.59
SHROOM1-203ENST00000378679 ZFP30Q9Y2G7 519 aa11.34□□□□□ -0.59
SHROOM1-203ENST00000378679 POLQO75417 2590 aa11.34□□□□□ -0.59
SHROOM1-203ENST00000378679 PF4P02776 101 aa11.33□□□□□ -0.6
SHROOM1-203ENST00000378679 FABP5P3A8MUU1 101 aa11.33□□□□□ -0.6
SHROOM1-203ENST00000378679 M0R381 172 aa11.33□□□□□ -0.6
SHROOM1-203ENST00000378679 TCRAP04437 139 aa11.33□□□□□ -0.6
SHROOM1-203ENST00000378679 Q96MF0 132 aa11.33□□□□□ -0.6
SHROOM1-203ENST00000378679 OR4C46A6NHA9 309 aa11.33□□□□□ -0.6
SHROOM1-203ENST00000378679 PROP1O75360 226 aa11.33□□□□□ -0.6
SHROOM1-203ENST00000378679 FNDC4Q9H6D8 234 aaPredicted RBP11.33□□□□□ -0.6
SHROOM1-203ENST00000378679 ATG2AQ2TAZ0 1938 aa11.33□□□□□ -0.6
SHROOM1-203ENST00000378679 DTX2Q86UW9 622 aa11.32□□□□□ -0.6
SHROOM1-203ENST00000378679 RAX2Q96IS3 184 aa11.32□□□□□ -0.6
SHROOM1-203ENST00000378679 HSPB8Q9UJY1 196 aa11.32□□□□□ -0.6
SHROOM1-203ENST00000378679 TRBV7-1A0A0A6YYK4 115 aa11.32□□□□□ -0.6
SHROOM1-203ENST00000378679 IGFL4Q6B9Z1 124 aa11.32□□□□□ -0.6
SHROOM1-203ENST00000378679 BEX4Q9NWD9 120 aaPredicted RBP11.32□□□□□ -0.6
SHROOM1-203ENST00000378679 COL4A2P08572 1712 aa11.32□□□□□ -0.6
SHROOM1-203ENST00000378679 NPIPB5A8MRT5 1133 aa11.32□□□□□ -0.6
SHROOM1-203ENST00000378679 PFN1P07737 140 aaKnown RBP11.32□□□□□ -0.6
SHROOM1-203ENST00000378679 TMEM136Q6ZRR5 245 aa11.32□□□□□ -0.6
SHROOM1-203ENST00000378679 IGHV4-30-2A0A087WSY4 118 aa11.32□□□□□ -0.6
SHROOM1-203ENST00000378679 TDRG1Q3Y452 100 aa11.32□□□□□ -0.6
SHROOM1-203ENST00000378679 OR11H6Q8NGC7 330 aa11.32□□□□□ -0.6
SHROOM1-203ENST00000378679 TMEM242Q9NWH2 141 aa11.32□□□□□ -0.6
SHROOM1-203ENST00000378679 ARHGAP32A7KAX9 2087 aa11.31□□□□□ -0.6
SHROOM1-203ENST00000378679 IGKV2-40A0A087WW87 121 aaPredicted RBP11.31□□□□□ -0.6
SHROOM1-203ENST00000378679 TOMM40O96008 361 aa11.31□□□□□ -0.6
SHROOM1-203ENST00000378679 IGKV2D-40P01614 121 aaPredicted RBP11.31□□□□□ -0.6
SHROOM1-203ENST00000378679 GCSHP23434 173 aa11.31□□□□□ -0.6
SHROOM1-203ENST00000378679 CR1LQ2VPA4 569 aa11.31□□□□□ -0.6
SHROOM1-203ENST00000378679 BOD1L1Q8NFC6 3051 aa11.31□□□□□ -0.6
SHROOM1-203ENST00000378679 IGLC7A0M8Q6 106 aa11.31□□□□□ -0.6
SHROOM1-203ENST00000378679 IZUMO1RA6ND01 250 aa11.31□□□□□ -0.6
SHROOM1-203ENST00000378679 DAZAP2Q15038 168 aaPredicted RBP11.31□□□□□ -0.6
SHROOM1-203ENST00000378679 FAM74A4Q5TZK3 123 aa11.31□□□□□ -0.6
SHROOM1-203ENST00000378679 KIAA1549Q9HCM3 1950 aa11.31□□□□□ -0.6
SHROOM1-203ENST00000378679 C9JCJ5 164 aa11.31□□□□□ -0.6
SHROOM1-203ENST00000378679 FAM120AOSQ5T036 256 aa11.31□□□□□ -0.6
SHROOM1-203ENST00000378679 UTF1Q5T230 341 aa11.31□□□□□ -0.6
SHROOM1-203ENST00000378679 SIGLEC15Q6ZMC9 328 aa11.31□□□□□ -0.6
SHROOM1-203ENST00000378679 NUDT10Q8NFP7 164 aa11.31□□□□□ -0.6
SHROOM1-203ENST00000378679 FAM110DQ8TAY7 271 aaPredicted RBP11.31□□□□□ -0.6
SHROOM1-203ENST00000378679 NUDT11Q96G61 164 aa11.31□□□□□ -0.6
SHROOM1-203ENST00000378679 CGB3P0DN86 165 aa11.3□□□□□ -0.6
SHROOM1-203ENST00000378679 CGB7P0DN87 165 aa11.3□□□□□ -0.6
SHROOM1-203ENST00000378679 BTF3P20290 206 aaKnown RBP11.3□□□□□ -0.6
SHROOM1-203ENST00000378679 PLP1P60201 277 aa11.3□□□□□ -0.6
SHROOM1-203ENST00000378679 FBLN7Q53RD9 439 aa11.3□□□□□ -0.6
SHROOM1-203ENST00000378679 FER1L6-AS1Q8NA97 138 aa11.3□□□□□ -0.6
SHROOM1-203ENST00000378679 J3QR89 54 aa11.3□□□□□ -0.6
SHROOM1-203ENST00000378679 IGLV1-47P01700 117 aa11.3□□□□□ -0.6
SHROOM1-203ENST00000378679 USMG5Q96IX5 58 aa11.3□□□□□ -0.6
SHROOM1-203ENST00000378679 RITA1Q96K30 269 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms