RNA–Protein interactions for RNA: ENST00000377861.4

PCDH9-201, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 28,227 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-201ENST00000377861 RRN3P1Q2M238 152 aa3.95□□□□□ -1.78
PCDH9-201ENST00000377861 MBD6Q96DN6 1003 aa3.95□□□□□ -1.78
PCDH9-201ENST00000377861 IGLL1P15814 213 aa3.94□□□□□ -1.78
PCDH9-201ENST00000377861 MEIG1Q5JSS6 88 aa3.94□□□□□ -1.78
PCDH9-201ENST00000377861 GGTLC3B5MD39 225 aa3.94□□□□□ -1.78
PCDH9-201ENST00000377861 MRPL20Q9BYC9 149 aaKnown RBP3.94□□□□□ -1.78
PCDH9-201ENST00000377861 RBBP6Q7Z6E9 1792 aaKnown RBP3.94□□□□□ -1.78
PCDH9-201ENST00000377861 A0A1W2PRD5 423 aa3.94□□□□□ -1.78
PCDH9-201ENST00000377861 A0A1W2PRF3 423 aa3.94□□□□□ -1.78
PCDH9-201ENST00000377861 A0A1W2PRM7 423 aa3.94□□□□□ -1.78
PCDH9-201ENST00000377861 TRBV6-5A0A0K0K1A5 114 aa3.94□□□□□ -1.78
PCDH9-201ENST00000377861 LDLRAD2Q5SZI1 272 aa3.94□□□□□ -1.78
PCDH9-201ENST00000377861 TP53TG3Q9ULZ0 132 aa3.94□□□□□ -1.78
PCDH9-201ENST00000377861 TRAV8-6A0A0B4J262 113 aa3.94□□□□□ -1.78
PCDH9-201ENST00000377861 Q6Q795 121 aa3.94□□□□□ -1.78
PCDH9-201ENST00000377861 PARP14Q460N5 1801 aa3.94□□□□□ -1.78
PCDH9-201ENST00000377861 LINC01546A6NGU7 62 aa3.94□□□□□ -1.78
PCDH9-201ENST00000377861 PLPPR2Q96GM1 343 aa3.94□□□□□ -1.78
PCDH9-201ENST00000377861 IGF1P05019 195 aa3.94□□□□□ -1.78
PCDH9-201ENST00000377861 ZNF672Q499Z4 452 aaPredicted RBP3.94□□□□□ -1.78
PCDH9-201ENST00000377861 ZNF491Q8N8L2 437 aa3.94□□□□□ -1.78
PCDH9-201ENST00000377861 TIMM21Q9BVV7 248 aa3.94□□□□□ -1.78
PCDH9-201ENST00000377861 BPESC1Q9GZL8 116 aa3.94□□□□□ -1.78
PCDH9-201ENST00000377861 APC2O95996 2303 aa3.94□□□□□ -1.78
PCDH9-201ENST00000377861 LEPROTO15243 131 aa3.94□□□□□ -1.78
PCDH9-201ENST00000377861 LOC105378220A0A1B0GUY1 285 aaPredicted RBP3.94□□□□□ -1.78
PCDH9-201ENST00000377861 SDHAF1A6NFY7 115 aa3.94□□□□□ -1.78
PCDH9-201ENST00000377861 IGLV2-14P01704 120 aa3.94□□□□□ -1.78
PCDH9-201ENST00000377861 ZC2HC1AQ96GY0 325 aa3.94□□□□□ -1.78
PCDH9-201ENST00000377861 A0A0G2JMZ2 1700 aa3.94□□□□□ -1.78
PCDH9-201ENST00000377861 F8WDY8 70 aa3.94□□□□□ -1.78
PCDH9-201ENST00000377861 Q0VFX4 171 aa3.94□□□□□ -1.78
PCDH9-201ENST00000377861 FAM167A-AS1Q96KT0 104 aa3.94□□□□□ -1.78
PCDH9-201ENST00000377861 NPFFO15130 113 aa3.94□□□□□ -1.78
PCDH9-201ENST00000377861 Q86TA4 180 aa3.94□□□□□ -1.78
PCDH9-201ENST00000377861 IGHV1-69P01742 117 aa3.94□□□□□ -1.78
PCDH9-201ENST00000377861 ZMAT4Q9H898 229 aa3.94□□□□□ -1.78
PCDH9-201ENST00000377861 GBF1Q92538 1859 aa3.94□□□□□ -1.78
PCDH9-201ENST00000377861 A0A0J9YX75 114 aa3.94□□□□□ -1.78
PCDH9-201ENST00000377861 GAGE12HA6NDE8 117 aa3.94□□□□□ -1.78
PCDH9-201ENST00000377861 C15orf32Q32M92 178 aa3.94□□□□□ -1.78
PCDH9-201ENST00000377861 ANAPC13Q9BS18 74 aa3.94□□□□□ -1.78
PCDH9-201ENST00000377861 TSSC4Q9Y5U2 329 aaPredicted RBP3.94□□□□□ -1.78
PCDH9-201ENST00000377861 THSD7BQ9C0I4 1608 aa3.93□□□□□ -1.78
PCDH9-201ENST00000377861 TRAV41A0A0B4J266 112 aa3.93□□□□□ -1.78
PCDH9-201ENST00000377861 NKX2-8O15522 239 aa3.93□□□□□ -1.78
PCDH9-201ENST00000377861 CSN3P07498 182 aa3.93□□□□□ -1.78
PCDH9-201ENST00000377861 NDUFC1O43677 76 aa3.93□□□□□ -1.78
PCDH9-201ENST00000377861 NDUFA3O95167 84 aa3.93□□□□□ -1.78
PCDH9-201ENST00000377861 C19orf54Q5BKX5 351 aa3.93□□□□□ -1.78
PCDH9-201ENST00000377861 TEN1Q86WV5 123 aa3.93□□□□□ -1.78
PCDH9-201ENST00000377861 MCRIP2Q9BUT9 160 aaKnown RBP3.93□□□□□ -1.78
PCDH9-201ENST00000377861 H3BUT2 72 aa3.93□□□□□ -1.78
PCDH9-201ENST00000377861 GAFA1Q96PS6 74 aa3.93□□□□□ -1.78
PCDH9-201ENST00000377861 TDGF1P13385 188 aa3.93□□□□□ -1.78
PCDH9-201ENST00000377861 MYCNOSP40205 109 aa3.93□□□□□ -1.78
PCDH9-201ENST00000377861 ZNF134P52741 427 aa3.93□□□□□ -1.78
PCDH9-201ENST00000377861 RPL36AP83881 106 aaKnown RBP3.93□□□□□ -1.78
PCDH9-201ENST00000377861 C17orf58Q2M2W7 97 aa3.93□□□□□ -1.78
PCDH9-201ENST00000377861 ATP5EP2Q5VTU8 51 aa3.93□□□□□ -1.78
PCDH9-201ENST00000377861 RPL36ALQ969Q0 106 aaKnown RBP3.93□□□□□ -1.78
PCDH9-201ENST00000377861 CSDC2Q9Y534 153 aaKnown RBP3.93□□□□□ -1.78
PCDH9-201ENST00000377861 TFF3Q07654 80 aa3.93□□□□□ -1.78
PCDH9-201ENST00000377861 E9PLD3 99 aa3.93□□□□□ -1.78
PCDH9-201ENST00000377861 ZNF815PA8K554 130 aa3.93□□□□□ -1.78
PCDH9-201ENST00000377861 GNG10P50151 68 aa3.93□□□□□ -1.78
PCDH9-201ENST00000377861 INSL3P51460 131 aa3.93□□□□□ -1.78
PCDH9-201ENST00000377861 KLRD1Q13241 179 aa3.93□□□□□ -1.78
PCDH9-201ENST00000377861 PRADC1Q9BSG0 188 aa3.93□□□□□ -1.78
PCDH9-201ENST00000377861 PRR13Q9NZ81 148 aa3.93□□□□□ -1.78
PCDH9-201ENST00000377861 SHANK3Q9BYB0 1731 aa3.93□□□□□ -1.78
PCDH9-201ENST00000377861 I3L2K1 104 aa3.93□□□□□ -1.78
PCDH9-201ENST00000377861 FAM110AQ9BQ89 295 aa3.93□□□□□ -1.78
PCDH9-201ENST00000377861 IGKV1-17P01599 117 aa3.93□□□□□ -1.78
PCDH9-201ENST00000377861 TDRD6O60522 2096 aaKnown RBP3.93□□□□□ -1.78
PCDH9-201ENST00000377861 H3BRN7 92 aa3.93□□□□□ -1.78
PCDH9-201ENST00000377861 C5orf24Q7Z6I8 188 aa3.93□□□□□ -1.78
PCDH9-201ENST00000377861 LHFPL4Q7Z7J7 247 aa3.92□□□□□ -1.78
PCDH9-201ENST00000377861 FAM168AQ92567 244 aa3.92□□□□□ -1.78
PCDH9-201ENST00000377861 ZNF318Q5VUA4 2279 aa3.92□□□□□ -1.78
PCDH9-201ENST00000377861 LY6G6EA0A0G2JKS1 128 aa3.92□□□□□ -1.78
PCDH9-201ENST00000377861 VSIRQ9H7M9 311 aa3.92□□□□□ -1.78
PCDH9-201ENST00000377861 U3KQA8 63 aa3.92□□□□□ -1.78
PCDH9-201ENST00000377861 TDRG1Q3Y452 100 aa3.92□□□□□ -1.78
PCDH9-201ENST00000377861 K7ENP7 123 aa3.92□□□□□ -1.78
PCDH9-201ENST00000377861 SPINK4O60575 86 aa3.92□□□□□ -1.78
PCDH9-201ENST00000377861 C9orf106Q8NAJ2 232 aa3.92□□□□□ -1.78
PCDH9-201ENST00000377861 CACNA1IQ9P0X4 2223 aa3.92□□□□□ -1.78
PCDH9-201ENST00000377861 TRGV3P03979 118 aa3.92□□□□□ -1.78
PCDH9-201ENST00000377861 TMEM170BQ5T4T1 132 aa3.92□□□□□ -1.78
PCDH9-201ENST00000377861 WT1-ASQ06250 92 aa3.92□□□□□ -1.78
PCDH9-201ENST00000377861 ZDBF2Q9HCK1 2354 aa3.92□□□□□ -1.78
PCDH9-201ENST00000377861 GFI1BQ5VTD9 330 aa3.92□□□□□ -1.78
PCDH9-201ENST00000377861 FAM19A2Q8N3H0 131 aa3.92□□□□□ -1.78
PCDH9-201ENST00000377861 SPINK8P0C7L1 97 aa3.92□□□□□ -1.78
PCDH9-201ENST00000377861 C5orf63A6NC05 138 aa3.92□□□□□ -1.78
PCDH9-201ENST00000377861 BUB3O43684 328 aa3.92□□□□□ -1.78
PCDH9-201ENST00000377861 PGPEP1Q9NXJ5 209 aa3.92□□□□□ -1.78
PCDH9-201ENST00000377861 TIMM8BQ9Y5J9 83 aaPredicted RBP3.92□□□□□ -1.78
PCDH9-201ENST00000377861 PIEZO1Q92508 2521 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms