RNA–Protein interactions for RNA: ENST00000375274.6

PTCH1-203, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 4,720 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-203ENST00000375274 TRAV8-2A0A0B4J237 113 aa9.34□□□□□ -0.91
PTCH1-203ENST00000375274 COX6B1P14854 86 aa9.34□□□□□ -0.91
PTCH1-203ENST00000375274 SLAQ13239 276 aa9.34□□□□□ -0.91
PTCH1-203ENST00000375274 KLRD1Q13241 179 aa9.34□□□□□ -0.91
PTCH1-203ENST00000375274 CDPF1Q6NVV7 123 aa9.34□□□□□ -0.91
PTCH1-203ENST00000375274 SIGLEC15Q6ZMC9 328 aa9.34□□□□□ -0.91
PTCH1-203ENST00000375274 ZFHX2Q9C0A1 2572 aaPredicted RBP9.33□□□□□ -0.92
PTCH1-203ENST00000375274 H3BRM9 83 aa9.33□□□□□ -0.92
PTCH1-203ENST00000375274 OVOL1O14753 267 aa9.33□□□□□ -0.92
PTCH1-203ENST00000375274 CT83Q5H943 113 aa9.33□□□□□ -0.92
PTCH1-203ENST00000375274 VMO1Q7Z5L0 202 aa9.33□□□□□ -0.92
PTCH1-203ENST00000375274 KIR3DS1Q14943 382 aa9.33□□□□□ -0.92
PTCH1-203ENST00000375274 OR13C6PQ8NH95 151 aa9.33□□□□□ -0.92
PTCH1-203ENST00000375274 OOSP1A8MZH6 123 aa9.33□□□□□ -0.92
PTCH1-203ENST00000375274 SMKR1H3BMG3 65 aa9.33□□□□□ -0.92
PTCH1-203ENST00000375274 FAM231DQ6ZW35 169 aa9.33□□□□□ -0.92
PTCH1-203ENST00000375274 SHANK2-AS3Q9BTD1 123 aa9.33□□□□□ -0.92
PTCH1-203ENST00000375274 NPFFR1Q9GZQ6 430 aa9.33□□□□□ -0.92
PTCH1-203ENST00000375274 ZNF492Q9P255 531 aa9.33□□□□□ -0.92
PTCH1-203ENST00000375274 TICRRQ7Z2Z1 1910 aa9.33□□□□□ -0.92
PTCH1-203ENST00000375274 ACACBO00763 2458 aa9.33□□□□□ -0.92
PTCH1-203ENST00000375274 LINC01549A6NIU2 74 aa9.33□□□□□ -0.92
PTCH1-203ENST00000375274 C15orf65H3BRN8 121 aa9.33□□□□□ -0.92
PTCH1-203ENST00000375274 IGFL4Q6B9Z1 124 aa9.33□□□□□ -0.92
PTCH1-203ENST00000375274 Q6ZS92 163 aa9.33□□□□□ -0.92
PTCH1-203ENST00000375274 FAM208BQ5VWN6 2430 aa9.32□□□□□ -0.92
PTCH1-203ENST00000375274 A0A0G2JNJ9 132 aa9.32□□□□□ -0.92
PTCH1-203ENST00000375274 TMEM158Q8WZ71 300 aa9.32□□□□□ -0.92
PTCH1-203ENST00000375274 NCOR1P1Q9H4R4 102 aa9.32□□□□□ -0.92
PTCH1-203ENST00000375274 Q9UFV3 132 aa9.32□□□□□ -0.92
PTCH1-203ENST00000375274 PLXNB3Q9ULL4 1909 aa9.32□□□□□ -0.92
PTCH1-203ENST00000375274 NPSP0C0P6 89 aa9.32□□□□□ -0.92
PTCH1-203ENST00000375274 PDE6HQ13956 83 aa9.32□□□□□ -0.92
PTCH1-203ENST00000375274 COA6Q5JTJ3 125 aaKnown RBP9.32□□□□□ -0.92
PTCH1-203ENST00000375274 STPG4Q8N801 248 aa9.32□□□□□ -0.92
PTCH1-203ENST00000375274 TSPAN13O95857 204 aa9.32□□□□□ -0.92
PTCH1-203ENST00000375274 ZNF134P52741 427 aa9.32□□□□□ -0.92
PTCH1-203ENST00000375274 ITLN2Q8WWU7 325 aaPredicted RBP9.32□□□□□ -0.92
PTCH1-203ENST00000375274 TRAV2A0A0B4J234 112 aa9.31□□□□□ -0.92
PTCH1-203ENST00000375274 RNASE1P07998 156 aaKnown RBP9.31□□□□□ -0.92
PTCH1-203ENST00000375274 GATA4P43694 442 aa9.31□□□□□ -0.92
PTCH1-203ENST00000375274 C17orf58Q2M2W7 97 aa9.31□□□□□ -0.92
PTCH1-203ENST00000375274 MINOS1Q5TGZ0 78 aa9.31□□□□□ -0.92
PTCH1-203ENST00000375274 LSM4Q9Y4Z0 139 aaKnown RBP9.31□□□□□ -0.92
PTCH1-203ENST00000375274 MINOS1-NBL1R4GNA1 71 aa9.31□□□□□ -0.92
PTCH1-203ENST00000375274 CFHR2P36980 270 aa9.31□□□□□ -0.92
PTCH1-203ENST00000375274 SPACA3Q8IXA5 215 aa9.31□□□□□ -0.92
PTCH1-203ENST00000375274 PYGO2Q9BRQ0 406 aa9.31□□□□□ -0.92
PTCH1-203ENST00000375274 TRAV41A0A0B4J266 112 aa9.31□□□□□ -0.92
PTCH1-203ENST00000375274 A8MWV9 139 aa9.31□□□□□ -0.92
PTCH1-203ENST00000375274 IGLL1P15814 213 aa9.31□□□□□ -0.92
PTCH1-203ENST00000375274 PLNP26678 52 aa9.31□□□□□ -0.92
PTCH1-203ENST00000375274 WT1-ASQ06250 92 aa9.31□□□□□ -0.92
PTCH1-203ENST00000375274 TMEM249Q2WGJ8 235 aa9.31□□□□□ -0.92
PTCH1-203ENST00000375274 RNF138Q8WVD3 245 aa9.31□□□□□ -0.92
PTCH1-203ENST00000375274 HAX1O00165 279 aa9.3□□□□□ -0.92
PTCH1-203ENST00000375274 SMAD7O15105 426 aaKnown RBP9.3□□□□□ -0.92
PTCH1-203ENST00000375274 PRR20EP86478 221 aa9.3□□□□□ -0.92
PTCH1-203ENST00000375274 PRR20CP86479 221 aa9.3□□□□□ -0.92
PTCH1-203ENST00000375274 PRR20DP86480 221 aa9.3□□□□□ -0.92
PTCH1-203ENST00000375274 PRR20BP86481 221 aa9.3□□□□□ -0.92
PTCH1-203ENST00000375274 PRR20AP86496 221 aa9.3□□□□□ -0.92
PTCH1-203ENST00000375274 DUX4L9Q6RFH8 374 aaPredicted RBP9.3□□□□□ -0.92
PTCH1-203ENST00000375274 C9orf139Q6ZV77 190 aa9.3□□□□□ -0.92
PTCH1-203ENST00000375274 LINC01587Q99440 93 aa9.3□□□□□ -0.92
PTCH1-203ENST00000375274 SRD5A1P18405 259 aa9.3□□□□□ -0.92
PTCH1-203ENST00000375274 C10orf126Q8N4M7 172 aa9.3□□□□□ -0.92
PTCH1-203ENST00000375274 RNF182Q8N6D2 247 aa9.3□□□□□ -0.92
PTCH1-203ENST00000375274 TEX29Q8N6K0 151 aa9.3□□□□□ -0.92
PTCH1-203ENST00000375274 TMEM101Q96IK0 257 aa9.3□□□□□ -0.92
PTCH1-203ENST00000375274 TOMM7Q9P0U1 55 aa9.3□□□□□ -0.92
PTCH1-203ENST00000375274 TMEM155Q4W5P6 130 aa9.3□□□□□ -0.92
PTCH1-203ENST00000375274 SRSF8Q9BRL6 282 aaKnown RBP9.3□□□□□ -0.92
PTCH1-203ENST00000375274 TRAV40A0A0B4J280 105 aa9.3□□□□□ -0.92
PTCH1-203ENST00000375274 SMIM27A0A1W2PRY6 76 aa9.3□□□□□ -0.92
PTCH1-203ENST00000375274 TMEM213A2RRL7 107 aa9.3□□□□□ -0.92
PTCH1-203ENST00000375274 DUSP14O95147 198 aaKnown RBP9.3□□□□□ -0.92
PTCH1-203ENST00000375274 TMEM262E9PQX1 116 aa9.29□□□□□ -0.92
PTCH1-203ENST00000375274 TEX43Q6ZNM6 134 aa9.29□□□□□ -0.92
PTCH1-203ENST00000375274 Q6ZSR3 168 aa9.29□□□□□ -0.92
PTCH1-203ENST00000375274 TMEM219Q86XT9 240 aa9.29□□□□□ -0.92
PTCH1-203ENST00000375274 WFDC12Q8WWY7 111 aa9.29□□□□□ -0.92
PTCH1-203ENST00000375274 SRRM4A7MD48 611 aaKnown RBP9.29□□□□□ -0.92
PTCH1-203ENST00000375274 DPH3P1Q9H4G8 78 aa9.29□□□□□ -0.92
PTCH1-203ENST00000375274 ANKHD1Q8IWZ3 2542 aaKnown RBP9.29□□□□□ -0.92
PTCH1-203ENST00000375274 MMP23AO75900 390 aa9.29□□□□□ -0.92
PTCH1-203ENST00000375274 NDPQ00604 133 aa9.29□□□□□ -0.92
PTCH1-203ENST00000375274 M0R1W7 72 aa9.29□□□□□ -0.92
PTCH1-203ENST00000375274 LY6HO94772 140 aa9.29□□□□□ -0.92
PTCH1-203ENST00000375274 COL8A2P25067 703 aa9.29□□□□□ -0.92
PTCH1-203ENST00000375274 Q5PR19 223 aa9.29□□□□□ -0.92
PTCH1-203ENST00000375274 ZNF833PQ6ZTB9 187 aa9.29□□□□□ -0.92
PTCH1-203ENST00000375274 FGF23Q9GZV9 251 aaPredicted RBP9.29□□□□□ -0.92
PTCH1-203ENST00000375274 FRMPD3Q5JV73 1810 aa9.28□□□□□ -0.92
PTCH1-203ENST00000375274 TRBV19A0A075B6N1 114 aa9.28□□□□□ -0.92
PTCH1-203ENST00000375274 IGKV3D-20A0A0C4DH25 116 aa9.28□□□□□ -0.92
PTCH1-203ENST00000375274 TMEM8BA6NDV4 472 aa9.28□□□□□ -0.92
PTCH1-203ENST00000375274 CD28P10747 220 aa9.28□□□□□ -0.92
PTCH1-203ENST00000375274 POU2AF1Q16633 256 aa9.28□□□□□ -0.92
PTCH1-203ENST00000375274 FAM104BQ5XKR9 115 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 169.8 ms