RNA–Protein interactions for RNA: ENST00000375224.1

UBR4-202, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 3,475 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-202ENST00000375224 COL6A6A6NMZ7 2263 aa6.55□□□□□ -1.36
UBR4-202ENST00000375224 SPINK8P0C7L1 97 aa6.54□□□□□ -1.36
UBR4-202ENST00000375224 UQCRFS1P47985 274 aa6.54□□□□□ -1.36
UBR4-202ENST00000375224 SEC11AP67812 179 aa6.54□□□□□ -1.36
UBR4-202ENST00000375224 C5orf47Q569G3 176 aa6.54□□□□□ -1.36
UBR4-202ENST00000375224 LCN12Q6JVE5 192 aa6.54□□□□□ -1.36
UBR4-202ENST00000375224 NPBQ8NG41 125 aa6.54□□□□□ -1.36
UBR4-202ENST00000375224 KCNS1Q96KK3 526 aa6.54□□□□□ -1.36
UBR4-202ENST00000375224 CYSLTR1Q9Y271 337 aa6.54□□□□□ -1.36
UBR4-202ENST00000375224 IGKV1D-37A0A075B6S9 117 aa6.54□□□□□ -1.36
UBR4-202ENST00000375224 TEX22C9J3V5 150 aa6.54□□□□□ -1.36
UBR4-202ENST00000375224 ZNF324O75467 553 aaPredicted RBP6.54□□□□□ -1.36
UBR4-202ENST00000375224 HSBP1O75506 76 aa6.54□□□□□ -1.36
UBR4-202ENST00000375224 HIST1H1EP10412 219 aaKnown RBP6.54□□□□□ -1.36
UBR4-202ENST00000375224 LGALS4P56470 323 aa6.54□□□□□ -1.36
UBR4-202ENST00000375224 Q0VG73 95 aa6.54□□□□□ -1.36
UBR4-202ENST00000375224 SNURFLB1AK76 121 aa6.53□□□□□ -1.36
UBR4-202ENST00000375224 PRB3Q04118 309 aaPredicted RBP6.53□□□□□ -1.36
UBR4-202ENST00000375224 FOXL1Q12952 345 aa6.53□□□□□ -1.36
UBR4-202ENST00000375224 CFHR4Q92496 578 aa6.53□□□□□ -1.36
UBR4-202ENST00000375224 PAXXQ9BUH6 204 aa6.53□□□□□ -1.36
UBR4-202ENST00000375224 NBASA2RRP1 2371 aa6.53□□□□□ -1.36
UBR4-202ENST00000375224 C9orf118A6NHY6 69 aa6.53□□□□□ -1.36
UBR4-202ENST00000375224 NDUFA3O95167 84 aa6.53□□□□□ -1.36
UBR4-202ENST00000375224 GATA3P23771 443 aa6.53□□□□□ -1.36
UBR4-202ENST00000375224 YPEL3P61236 119 aaPredicted RBP6.53□□□□□ -1.36
UBR4-202ENST00000375224 UBE2L3P68036 154 aaKnown RBP6.53□□□□□ -1.36
UBR4-202ENST00000375224 OR10G8Q8NGN5 311 aa6.53□□□□□ -1.36
UBR4-202ENST00000375224 ZNF503Q96F45 646 aa6.53□□□□□ -1.36
UBR4-202ENST00000375224 FAM167A-AS1Q96KT0 104 aa6.53□□□□□ -1.36
UBR4-202ENST00000375224 SLC25A2Q9BXI2 301 aa6.53□□□□□ -1.36
UBR4-202ENST00000375224 NAT8BQ9UHF3 227 aa6.53□□□□□ -1.36
UBR4-202ENST00000375224 ERG28Q9UKR5 140 aa6.53□□□□□ -1.36
UBR4-202ENST00000375224 HILPDAQ9Y5L2 63 aa6.53□□□□□ -1.36
UBR4-202ENST00000375224 TRAV9-1A0A075B6T8 112 aa6.53□□□□□ -1.36
UBR4-202ENST00000375224 UFSP1Q6NVU6 142 aa6.53□□□□□ -1.36
UBR4-202ENST00000375224 VMO1Q7Z5L0 202 aa6.53□□□□□ -1.36
UBR4-202ENST00000375224 Q8N976 141 aa6.53□□□□□ -1.36
UBR4-202ENST00000375224 OCC1Q8TAD7 63 aa6.53□□□□□ -1.36
UBR4-202ENST00000375224 ZNF355PQ9NSJ1 428 aa6.53□□□□□ -1.36
UBR4-202ENST00000375224 NBEAQ8NFP9 2946 aa6.52□□□□□ -1.37
UBR4-202ENST00000375224 A0A0G2JLM5 398 aa6.52□□□□□ -1.37
UBR4-202ENST00000375224 M0QXV9 152 aa6.52□□□□□ -1.37
UBR4-202ENST00000375224 TGFAP01135 160 aa6.52□□□□□ -1.37
UBR4-202ENST00000375224 GPR183P32249 361 aa6.52□□□□□ -1.37
UBR4-202ENST00000375224 IER3P46695 156 aa6.52□□□□□ -1.37
UBR4-202ENST00000375224 HES1Q14469 280 aa6.52□□□□□ -1.37
UBR4-202ENST00000375224 BPIFA4PQ86YQ2 179 aa6.52□□□□□ -1.37
UBR4-202ENST00000375224 FAM19A2Q8N3H0 131 aa6.52□□□□□ -1.37
UBR4-202ENST00000375224 RAB37Q96AX2 223 aa6.52□□□□□ -1.37
UBR4-202ENST00000375224 GPR82Q96P67 336 aa6.52□□□□□ -1.37
UBR4-202ENST00000375224 NAA38Q9BRA0 125 aaKnown RBP6.52□□□□□ -1.37
UBR4-202ENST00000375224 ZZEF1O43149 2961 aa6.52□□□□□ -1.37
UBR4-202ENST00000375224 NCOR2Q9Y618 2525 aa6.52□□□□□ -1.37
UBR4-202ENST00000375224 CHD8Q9HCK8 2581 aa6.52□□□□□ -1.37
UBR4-202ENST00000375224 A0A1W2PPR1 153 aa6.52□□□□□ -1.37
UBR4-202ENST00000375224 M0R2Z0 102 aa6.52□□□□□ -1.37
UBR4-202ENST00000375224 MFAP2P55001 183 aa6.52□□□□□ -1.37
UBR4-202ENST00000375224 KLRD1Q13241 179 aa6.52□□□□□ -1.37
UBR4-202ENST00000375224 TIGITQ495A1 244 aa6.52□□□□□ -1.37
UBR4-202ENST00000375224 LINC00305Q7Z4B0 112 aa6.52□□□□□ -1.37
UBR4-202ENST00000375224 HIVEP3Q5T1R4 2406 aa6.52□□□□□ -1.37
UBR4-202ENST00000375224 CRYBB3P26998 211 aa6.52□□□□□ -1.37
UBR4-202ENST00000375224 PATE2Q6UY27 113 aa6.52□□□□□ -1.37
UBR4-202ENST00000375224 TMEM190Q8WZ59 177 aa6.52□□□□□ -1.37
UBR4-202ENST00000375224 SPATA25Q9BR10 227 aa6.52□□□□□ -1.37
UBR4-202ENST00000375224 GNB4Q9HAV0 340 aa6.52□□□□□ -1.37
UBR4-202ENST00000375224 TP53TG3Q9ULZ0 132 aa6.52□□□□□ -1.37
UBR4-202ENST00000375224 TRBV20OR9-2A0A075B6H5 130 aa6.51□□□□□ -1.37
UBR4-202ENST00000375224 A0A087X0K7 114 aa6.51□□□□□ -1.37
UBR4-202ENST00000375224 IGHV3-48P01763 117 aa6.51□□□□□ -1.37
UBR4-202ENST00000375224 UBE2G1P62253 170 aa6.51□□□□□ -1.37
UBR4-202ENST00000375224 FXYD3Q14802 87 aa6.51□□□□□ -1.37
UBR4-202ENST00000375224 ADAMTSL5Q6ZMM2 481 aa6.51□□□□□ -1.37
UBR4-202ENST00000375224 NDFIP1Q9BT67 221 aa6.51□□□□□ -1.37
UBR4-202ENST00000375224 C1RLQ9NZP8 487 aa6.51□□□□□ -1.37
UBR4-202ENST00000375224 MRPL36Q9P0J6 103 aaKnown RBP6.51□□□□□ -1.37
UBR4-202ENST00000375224 NAV3Q8IVL0 2385 aa6.51□□□□□ -1.37
UBR4-202ENST00000375224 TRAV5A0A0B4J249 113 aa6.51□□□□□ -1.37
UBR4-202ENST00000375224 F2Z2F3 143 aa6.51□□□□□ -1.37
UBR4-202ENST00000375224 H3BRM9 83 aa6.51□□□□□ -1.37
UBR4-202ENST00000375224 HOXB4P17483 251 aaPredicted RBP6.51□□□□□ -1.37
UBR4-202ENST00000375224 ORM2P19652 201 aa6.51□□□□□ -1.37
UBR4-202ENST00000375224 EBI3Q14213 229 aa6.51□□□□□ -1.37
UBR4-202ENST00000375224 DAZAP1Q96EP5 407 aaKnown RBP6.51□□□□□ -1.37
UBR4-202ENST00000375224 SIRPDQ9H106 197 aa6.51□□□□□ -1.37
UBR4-202ENST00000375224 RNF114Q9Y508 228 aa6.51□□□□□ -1.37
UBR4-202ENST00000375224 SPTBN1Q01082 2364 aaKnown RBP6.51□□□□□ -1.37
UBR4-202ENST00000375224 A0A1W2PS18 150 aa6.51□□□□□ -1.37
UBR4-202ENST00000375224 GGTLC3B5MD39 225 aa6.51□□□□□ -1.37
UBR4-202ENST00000375224 I3L2K1 104 aa6.51□□□□□ -1.37
UBR4-202ENST00000375224 PLXNB1O43157 2135 aa6.51□□□□□ -1.37
UBR4-202ENST00000375224 APELAP0DMC3 54 aa6.51□□□□□ -1.37
UBR4-202ENST00000375224 ZFP36P26651 326 aaKnown RBP6.51□□□□□ -1.37
UBR4-202ENST00000375224 UBE2E1P51965 193 aa6.51□□□□□ -1.37
UBR4-202ENST00000375224 CENPWQ5EE01 88 aa6.51□□□□□ -1.37
UBR4-202ENST00000375224 RASL11BQ9BPW5 248 aa6.51□□□□□ -1.37
UBR4-202ENST00000375224 PIMREGQ9BSJ6 248 aa6.51□□□□□ -1.37
UBR4-202ENST00000375224 OR4C46A6NHA9 309 aa6.5□□□□□ -1.37
UBR4-202ENST00000375224 OVOL3O00110 214 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms