RNA–Protein interactions for RNA: ENST00000372189.7

RAPGEF1-201, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-201ENST00000372189 PYY3Q5JQD4 70 aa10.9□□□□□ -0.67
RAPGEF1-201ENST00000372189 STHQ8IWL8 128 aa10.9□□□□□ -0.67
RAPGEF1-201ENST00000372189 SLC50A1Q9BRV3 221 aa10.9□□□□□ -0.67
RAPGEF1-201ENST00000372189 BPESC1Q9GZL8 116 aa10.9□□□□□ -0.67
RAPGEF1-201ENST00000372189 OOSP1A8MZH6 123 aa10.89□□□□□ -0.67
RAPGEF1-201ENST00000372189 RNASE4P34096 147 aaKnown RBP10.89□□□□□ -0.67
RAPGEF1-201ENST00000372189 SUMO4Q6EEV6 95 aa10.89□□□□□ -0.67
RAPGEF1-201ENST00000372189 ETDBQ3ZM63 59 aa10.89□□□□□ -0.67
RAPGEF1-201ENST00000372189 LINC01559Q495D7 138 aa10.89□□□□□ -0.67
RAPGEF1-201ENST00000372189 ZNF664Q8N3J9 261 aa10.89□□□□□ -0.67
RAPGEF1-201ENST00000372189 EP300Q09472 2414 aaPredicted RBP10.89□□□□□ -0.67
RAPGEF1-201ENST00000372189 SCN8AQ9UQD0 1980 aa10.89□□□□□ -0.67
RAPGEF1-201ENST00000372189 BRD3OSQ6XYD6 125 aa10.89□□□□□ -0.67
RAPGEF1-201ENST00000372189 LINC01587Q99440 93 aa10.89□□□□□ -0.67
RAPGEF1-201ENST00000372189 DNAJC13O75165 2243 aa10.89□□□□□ -0.67
RAPGEF1-201ENST00000372189 GZMBP10144 247 aa10.89□□□□□ -0.67
RAPGEF1-201ENST00000372189 SRD5A1P18405 259 aa10.89□□□□□ -0.67
RAPGEF1-201ENST00000372189 LINC01551Q86U37 167 aa10.89□□□□□ -0.67
RAPGEF1-201ENST00000372189 TMEM219Q86XT9 240 aa10.89□□□□□ -0.67
RAPGEF1-201ENST00000372189 IFI27L1Q96BM0 104 aa10.89□□□□□ -0.67
RAPGEF1-201ENST00000372189 GAFA1Q96PS6 74 aa10.89□□□□□ -0.67
RAPGEF1-201ENST00000372189 LYL1P12980 280 aa10.89□□□□□ -0.67
RAPGEF1-201ENST00000372189 CEACAM8P31997 349 aaPredicted RBP10.89□□□□□ -0.67
RAPGEF1-201ENST00000372189 ORMDL2Q53FV1 153 aa10.89□□□□□ -0.67
RAPGEF1-201ENST00000372189 TREML4Q6UXN2 200 aa10.89□□□□□ -0.67
RAPGEF1-201ENST00000372189 SMPXQ9UHP9 88 aa10.89□□□□□ -0.67
RAPGEF1-201ENST00000372189 OR11H6Q8NGC7 330 aa10.88□□□□□ -0.67
RAPGEF1-201ENST00000372189 IGKV1-27A0A075B6S5 117 aa10.88□□□□□ -0.67
RAPGEF1-201ENST00000372189 RNF223E7ERA6 249 aa10.88□□□□□ -0.67
RAPGEF1-201ENST00000372189 A0A087X0K7 114 aa10.88□□□□□ -0.67
RAPGEF1-201ENST00000372189 NDUFC2-KCTD14E9PQ53 114 aa10.88□□□□□ -0.67
RAPGEF1-201ENST00000372189 RPRMLQ8N4K4 120 aa10.88□□□□□ -0.67
RAPGEF1-201ENST00000372189 IGHV1-3A0A0C4DH29 117 aa10.88□□□□□ -0.67
RAPGEF1-201ENST00000372189 TPRP12270 2363 aaKnown RBP10.88□□□□□ -0.67
RAPGEF1-201ENST00000372189 H3BUX3 64 aa10.87□□□□□ -0.67
RAPGEF1-201ENST00000372189 LINC00527Q9UJ94 153 aa10.87□□□□□ -0.67
RAPGEF1-201ENST00000372189 LY96Q9Y6Y9 160 aa10.87□□□□□ -0.67
RAPGEF1-201ENST00000372189 GATD1Q8NB37 220 aa10.87□□□□□ -0.67
RAPGEF1-201ENST00000372189 SLC25A39Q9BZJ4 359 aaPredicted RBP10.87□□□□□ -0.67
RAPGEF1-201ENST00000372189 LY6HO94772 140 aa10.87□□□□□ -0.67
RAPGEF1-201ENST00000372189 SERTAD4-AS1Q5TG53 156 aa10.87□□□□□ -0.67
RAPGEF1-201ENST00000372189 TMEM167AQ8TBQ9 72 aa10.87□□□□□ -0.67
RAPGEF1-201ENST00000372189 NMSQ5H8A3 153 aa10.87□□□□□ -0.67
RAPGEF1-201ENST00000372189 FOXL2NBQ6ZUU3 175 aa10.87□□□□□ -0.67
RAPGEF1-201ENST00000372189 WDR81Q562E7 1941 aa10.87□□□□□ -0.67
RAPGEF1-201ENST00000372189 F2Z2F3 143 aa10.87□□□□□ -0.67
RAPGEF1-201ENST00000372189 LILRA1O75019 489 aa10.87□□□□□ -0.67
RAPGEF1-201ENST00000372189 RP1P56715 2156 aa10.86□□□□□ -0.67
RAPGEF1-201ENST00000372189 M0QXV9 152 aa10.86□□□□□ -0.67
RAPGEF1-201ENST00000372189 IFI27P40305 119 aaPredicted RBP10.86□□□□□ -0.67
RAPGEF1-201ENST00000372189 TMEM86BQ8N661 226 aa10.86□□□□□ -0.67
RAPGEF1-201ENST00000372189 KLF17Q5JT82 389 aaPredicted RBP10.86□□□□□ -0.67
RAPGEF1-201ENST00000372189 DPH3Q96FX2 82 aa10.86□□□□□ -0.67
RAPGEF1-201ENST00000372189 PSPNO60542 156 aa10.86□□□□□ -0.67
RAPGEF1-201ENST00000372189 C3orf36Q3SXR2 165 aa10.86□□□□□ -0.67
RAPGEF1-201ENST00000372189 SLC25A48Q6ZT89 311 aaKnown RBP10.86□□□□□ -0.67
RAPGEF1-201ENST00000372189 CRPP02741 224 aa10.85□□□□□ -0.67
RAPGEF1-201ENST00000372189 PAX8Q06710 450 aa10.85□□□□□ -0.67
RAPGEF1-201ENST00000372189 Q96MF0 132 aa10.85□□□□□ -0.67
RAPGEF1-201ENST00000372189 CHKB-CPT1BH3BT56 60 aa10.85□□□□□ -0.67
RAPGEF1-201ENST00000372189 ADCYAP1P18509 176 aa10.85□□□□□ -0.67
RAPGEF1-201ENST00000372189 TMEM256Q8N2U0 113 aa10.85□□□□□ -0.67
RAPGEF1-201ENST00000372189 PTPRDP23468 1912 aa10.85□□□□□ -0.67
RAPGEF1-201ENST00000372189 ANKRD39Q53RE8 183 aa10.85□□□□□ -0.67
RAPGEF1-201ENST00000372189 IGHV2-70P01814 119 aa10.85□□□□□ -0.67
RAPGEF1-201ENST00000372189 HGFACQ04756 655 aa10.85□□□□□ -0.67
RAPGEF1-201ENST00000372189 RPP25LQ8N5L8 163 aaKnown RBP10.85□□□□□ -0.67
RAPGEF1-201ENST00000372189 RNF5Q99942 180 aa10.85□□□□□ -0.67
RAPGEF1-201ENST00000372189 FAM186AA6NE01 2351 aa10.85□□□□□ -0.67
RAPGEF1-201ENST00000372189 RNASE2P10153 161 aaKnown RBP10.85□□□□□ -0.67
RAPGEF1-201ENST00000372189 HTN3P15516 51 aa10.85□□□□□ -0.67
RAPGEF1-201ENST00000372189 LYPD2Q6UXB3 125 aa10.85□□□□□ -0.67
RAPGEF1-201ENST00000372189 TMEM14EPQ6UXP3 125 aa10.85□□□□□ -0.67
RAPGEF1-201ENST00000372189 LINC01549A6NIU2 74 aa10.84□□□□□ -0.67
RAPGEF1-201ENST00000372189 GATA3P23771 443 aa10.84□□□□□ -0.67
RAPGEF1-201ENST00000372189 PROK2Q9HC23 129 aa10.84□□□□□ -0.67
RAPGEF1-201ENST00000372189 NUP210Q8TEM1 1887 aaPredicted RBP10.84□□□□□ -0.67
RAPGEF1-201ENST00000372189 GBF1Q92538 1859 aa10.84□□□□□ -0.67
RAPGEF1-201ENST00000372189 SDK2Q58EX2 2172 aa10.84□□□□□ -0.67
RAPGEF1-201ENST00000372189 D6R8Y8 96 aa10.84□□□□□ -0.67
RAPGEF1-201ENST00000372189 BUB1B-PAK6H3BSN5 160 aa10.84□□□□□ -0.67
RAPGEF1-201ENST00000372189 SAP30O75446 220 aa10.84□□□□□ -0.67
RAPGEF1-201ENST00000372189 MUSTN1Q8IVN3 82 aa10.84□□□□□ -0.67
RAPGEF1-201ENST00000372189 ZNF625Q96I27 306 aaPredicted RBP10.84□□□□□ -0.67
RAPGEF1-201ENST00000372189 MRPL27Q9P0M9 148 aaKnown RBP10.84□□□□□ -0.67
RAPGEF1-201ENST00000372189 C5orf63A6NC05 138 aa10.84□□□□□ -0.67
RAPGEF1-201ENST00000372189 DUSP14O95147 198 aaKnown RBP10.84□□□□□ -0.67
RAPGEF1-201ENST00000372189 MSMBP08118 114 aa10.84□□□□□ -0.67
RAPGEF1-201ENST00000372189 SPATA31B1PQ5VZV4 182 aa10.84□□□□□ -0.67
RAPGEF1-201ENST00000372189 TMEM42Q69YG0 159 aa10.84□□□□□ -0.67
RAPGEF1-201ENST00000372189 IGKV1D-17A0A075B6S4 117 aa10.83□□□□□ -0.68
RAPGEF1-201ENST00000372189 TRGV2A0A075B6R0 118 aa10.83□□□□□ -0.68
RAPGEF1-201ENST00000372189 MMP23AO75900 390 aa10.83□□□□□ -0.68
RAPGEF1-201ENST00000372189 IGHG2P01859 326 aa10.83□□□□□ -0.68
RAPGEF1-201ENST00000372189 C3orf79P0CE67 100 aa10.83□□□□□ -0.68
RAPGEF1-201ENST00000372189 QRFPP83859 136 aa10.83□□□□□ -0.68
RAPGEF1-201ENST00000372189 GUSBP1Q15486 140 aa10.83□□□□□ -0.68
RAPGEF1-201ENST00000372189 LAGE3Q14657 143 aa10.83□□□□□ -0.68
RAPGEF1-201ENST00000372189 TRAV12-2A0A075B6T6 113 aa10.82□□□□□ -0.68
RAPGEF1-201ENST00000372189 IGKV1-5P01602 117 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms