RNA–Protein interactions for RNA: ENST00000368687.1

CHTOP-202, Transcript of chromatin target of PRMT1, humanhuman

TSL 1 (best) BASIC

Gene CHTOP, Length 1,094 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-202ENST00000368687 ZNF738Q8NE65 137 aa13.51□□□□□ -0.25
CHTOP-202ENST00000368687 OR4B1Q8NGF8 309 aa13.51□□□□□ -0.25
CHTOP-202ENST00000368687 MRPL32Q9BYC8 188 aaKnown RBP13.51□□□□□ -0.25
CHTOP-202ENST00000368687 TMEM14CQ9P0S9 112 aa13.51□□□□□ -0.25
CHTOP-202ENST00000368687 TRAV8-2A0A0B4J237 113 aa13.5□□□□□ -0.25
CHTOP-202ENST00000368687 ZNF705EA8MWA4 302 aaPredicted RBP13.5□□□□□ -0.25
CHTOP-202ENST00000368687 AMBPP02760 352 aa13.5□□□□□ -0.25
CHTOP-202ENST00000368687 IGLC2P0DOY2 106 aa13.5□□□□□ -0.25
CHTOP-202ENST00000368687 MIFP14174 115 aa13.5□□□□□ -0.25
CHTOP-202ENST00000368687 PSG9Q00887 426 aa13.5□□□□□ -0.25
CHTOP-202ENST00000368687 GDF5OSQ5U4N7 250 aa13.5□□□□□ -0.25
CHTOP-202ENST00000368687 FAM78BQ5VT40 261 aa13.5□□□□□ -0.25
CHTOP-202ENST00000368687 C20orf173Q96LM9 149 aa13.5□□□□□ -0.25
CHTOP-202ENST00000368687 AQP10Q96PS8 301 aa13.5□□□□□ -0.25
CHTOP-202ENST00000368687 ZNF331Q9NQX6 463 aaPredicted RBP13.5□□□□□ -0.25
CHTOP-202ENST00000368687 A8MTW9 85 aa13.49□□□□□ -0.25
CHTOP-202ENST00000368687 PDE6HQ13956 83 aa13.49□□□□□ -0.25
CHTOP-202ENST00000368687 PSG3Q16557 428 aa13.49□□□□□ -0.25
CHTOP-202ENST00000368687 INO80EQ8NBZ0 244 aaPredicted RBP13.49□□□□□ -0.25
CHTOP-202ENST00000368687 CSNK1G2-AS1Q8NCQ2 148 aa13.49□□□□□ -0.25
CHTOP-202ENST00000368687 MORN5Q5VZ52 161 aa13.48□□□□□ -0.25
CHTOP-202ENST00000368687 RNF182Q8N6D2 247 aa13.48□□□□□ -0.25
CHTOP-202ENST00000368687 SMIM3Q9BZL3 60 aa13.48□□□□□ -0.25
CHTOP-202ENST00000368687 MFFQ9GZY8 342 aa13.48□□□□□ -0.25
CHTOP-202ENST00000368687 XCL2Q9UBD3 114 aa13.48□□□□□ -0.25
CHTOP-202ENST00000368687 HIST1H1EP10412 219 aaKnown RBP13.47□□□□□ -0.25
CHTOP-202ENST00000368687 TIMM9Q9Y5J7 89 aa13.47□□□□□ -0.25
CHTOP-202ENST00000368687 SMIM9A6NGZ8 99 aa13.46□□□□□ -0.25
CHTOP-202ENST00000368687 F6UB75 175 aa13.46□□□□□ -0.25
CHTOP-202ENST00000368687 IGKV3-20P01619 116 aa13.46□□□□□ -0.25
CHTOP-202ENST00000368687 CNN1P51911 297 aaKnown RBP13.46□□□□□ -0.25
CHTOP-202ENST00000368687 OR8A1Q8NGG7 326 aa13.46□□□□□ -0.25
CHTOP-202ENST00000368687 OR2T35Q8NGX2 323 aa13.46□□□□□ -0.25
CHTOP-202ENST00000368687 RPUSD4Q96CM3 377 aaKnown RBP13.46□□□□□ -0.25
CHTOP-202ENST00000368687 NEU1Q99519 415 aa13.46□□□□□ -0.25
CHTOP-202ENST00000368687 TAS2R45P59539 299 aa13.45□□□□□ -0.26
CHTOP-202ENST00000368687 DEFB1P60022 68 aa13.45□□□□□ -0.26
CHTOP-202ENST00000368687 RHOBP62745 196 aa13.45□□□□□ -0.26
CHTOP-202ENST00000368687 FFAR4Q5NUL3 377 aa13.45□□□□□ -0.26
CHTOP-202ENST00000368687 ZFAND6Q6FIF0 208 aa13.45□□□□□ -0.26
CHTOP-202ENST00000368687 Q8NAQ8 132 aa13.45□□□□□ -0.26
CHTOP-202ENST00000368687 MRPL53Q96EL3 112 aaKnown RBP13.45□□□□□ -0.26
CHTOP-202ENST00000368687 SAT2Q96F10 170 aaPredicted RBP13.45□□□□□ -0.26
CHTOP-202ENST00000368687 FUT9Q9Y231 359 aa13.45□□□□□ -0.26
CHTOP-202ENST00000368687 PRELID1Q9Y255 219 aa13.45□□□□□ -0.26
CHTOP-202ENST00000368687 GOLT1BQ9Y3E0 138 aa13.45□□□□□ -0.26
CHTOP-202ENST00000368687 CSMD3Q7Z407 3707 aa13.45□□□□□ -0.26
CHTOP-202ENST00000368687 TRBV19A0A075B6N1 114 aa13.44□□□□□ -0.26
CHTOP-202ENST00000368687 TRAV5A0A0B4J249 113 aa13.44□□□□□ -0.26
CHTOP-202ENST00000368687 NUPR2A6NF83 97 aa13.44□□□□□ -0.26
CHTOP-202ENST00000368687 H3BQ15 152 aa13.44□□□□□ -0.26
CHTOP-202ENST00000368687 GCSAMLQ5JQS6 135 aa13.44□□□□□ -0.26
CHTOP-202ENST00000368687 IGFL4Q6B9Z1 124 aa13.44□□□□□ -0.26
CHTOP-202ENST00000368687 ZNF705AQ6ZN79 300 aaPredicted RBP13.44□□□□□ -0.26
CHTOP-202ENST00000368687 OR10J6PQ8NGY7 276 aa13.44□□□□□ -0.26
CHTOP-202ENST00000368687 AAMDCQ9H7C9 122 aa13.44□□□□□ -0.26
CHTOP-202ENST00000368687 PPP1R14DQ9NXH3 145 aa13.44□□□□□ -0.26
CHTOP-202ENST00000368687 STARD9Q9P2P6 4700 aa13.44□□□□□ -0.26
CHTOP-202ENST00000368687 TMEM189A5PLL7 270 aa13.43□□□□□ -0.26
CHTOP-202ENST00000368687 SLC17A3O00476 420 aa13.43□□□□□ -0.26
CHTOP-202ENST00000368687 HIST1H1AQ02539 215 aaPredicted RBP13.43□□□□□ -0.26
CHTOP-202ENST00000368687 ACOT6Q3I5F7 207 aaPredicted RBP13.43□□□□□ -0.26
CHTOP-202ENST00000368687 KHDC3LQ587J8 217 aa13.43□□□□□ -0.26
CHTOP-202ENST00000368687 AMTNQ6UX39 209 aa13.43□□□□□ -0.26
CHTOP-202ENST00000368687 C11orf45Q8TAV5 145 aa13.43□□□□□ -0.26
CHTOP-202ENST00000368687 IGF2BP2-AS1Q96M15 143 aa13.43□□□□□ -0.26
CHTOP-202ENST00000368687 SLC25A2Q9BXI2 301 aa13.43□□□□□ -0.26
CHTOP-202ENST00000368687 SLC35B3Q9H1N7 401 aa13.43□□□□□ -0.26
CHTOP-202ENST00000368687 OR51M1Q9H341 326 aa13.43□□□□□ -0.26
CHTOP-202ENST00000368687 ZNF586Q9NXT0 402 aa13.43□□□□□ -0.26
CHTOP-202ENST00000368687 X6R8D5 127 aa13.43□□□□□ -0.26
CHTOP-202ENST00000368687 TENM2Q9NT68 2774 aa13.43□□□□□ -0.26
CHTOP-202ENST00000368687 FXYD6-FXYD2A0A087WZ82 144 aa13.42□□□□□ -0.26
CHTOP-202ENST00000368687 IGHV4-28A0A0C4DH34 117 aa13.42□□□□□ -0.26
CHTOP-202ENST00000368687 CXorf65A6NEN9 183 aa13.42□□□□□ -0.26
CHTOP-202ENST00000368687 ZNF705FA8MVS1 300 aaPredicted RBP13.42□□□□□ -0.26
CHTOP-202ENST00000368687 BOLA2-SMG1P6H3BVE0 249 aa13.42□□□□□ -0.26
CHTOP-202ENST00000368687 INSP01308 110 aa13.42□□□□□ -0.26
CHTOP-202ENST00000368687 ZNF705DP0CH99 300 aaPredicted RBP13.42□□□□□ -0.26
CHTOP-202ENST00000368687 ZNF705BP0CI00 300 aaPredicted RBP13.42□□□□□ -0.26
CHTOP-202ENST00000368687 M6PRP20645 277 aa13.42□□□□□ -0.26
CHTOP-202ENST00000368687 MIR17HGQ75NE6 70 aa13.42□□□□□ -0.26
CHTOP-202ENST00000368687 PSMG3Q9BT73 122 aaPredicted RBP13.42□□□□□ -0.26
CHTOP-202ENST00000368687 PAXXQ9BUH6 204 aa13.42□□□□□ -0.26
CHTOP-202ENST00000368687 WFDC1Q9HC57 220 aa13.42□□□□□ -0.26
CHTOP-202ENST00000368687 TNFSF18Q9UNG2 199 aa13.42□□□□□ -0.26
CHTOP-202ENST00000368687 BORCS7-ASMTA0A0B4J1R7 106 aa13.41□□□□□ -0.26
CHTOP-202ENST00000368687 OR7C2O60412 319 aa13.41□□□□□ -0.26
CHTOP-202ENST00000368687 TSPOP30536 169 aa13.41□□□□□ -0.26
CHTOP-202ENST00000368687 OR2G3Q8NGZ4 309 aa13.41□□□□□ -0.26
CHTOP-202ENST00000368687 FAM167A-AS1Q96KT0 104 aa13.41□□□□□ -0.26
CHTOP-202ENST00000368687 DYNC2H1Q8NCM8 4307 aaKnown RBP13.4□□□□□ -0.26
CHTOP-202ENST00000368687 TEX48A0A1B0GUV7 120 aa13.4□□□□□ -0.26
CHTOP-202ENST00000368687 MBP02144 154 aa13.4□□□□□ -0.26
CHTOP-202ENST00000368687 NBEAP1P0C6P0 100 aa13.4□□□□□ -0.26
CHTOP-202ENST00000368687 PYYP10082 97 aa13.4□□□□□ -0.26
CHTOP-202ENST00000368687 HLA-DMBP28068 263 aa13.4□□□□□ -0.26
CHTOP-202ENST00000368687 FXYD7P58549 80 aa13.4□□□□□ -0.26
CHTOP-202ENST00000368687 SERF2P84101 59 aa13.4□□□□□ -0.26
CHTOP-202ENST00000368687 TMEM256Q8N2U0 113 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms