RNA–Protein interactions for RNA: ENST00000364007.1

RNU6-560P-201, Transcript of RNA, U6 small nuclear 560, pseudogene, humanhuman

BASIC

Gene RNU6-560P, Length 108 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-560P-201ENST00000364007 ARL5AQ9Y689 179 aa0.46□□□□□ -2.34
RNU6-560P-201ENST00000364007 TANC2Q9HCD6 1990 aa0.45□□□□□ -2.34
RNU6-560P-201ENST00000364007 BCORL1Q5H9F3 1711 aa0.45□□□□□ -2.34
RNU6-560P-201ENST00000364007 ODAMA1E959 279 aa0.45□□□□□ -2.34
RNU6-560P-201ENST00000364007 JMJD7-PLA2G4BH0Y9G9 81 aa0.45□□□□□ -2.34
RNU6-560P-201ENST00000364007 ATG12O94817 140 aa0.45□□□□□ -2.34
RNU6-560P-201ENST00000364007 TMBIM6P55061 237 aa0.45□□□□□ -2.34
RNU6-560P-201ENST00000364007 MRPS25P82663 173 aaKnown RBP0.45□□□□□ -2.34
RNU6-560P-201ENST00000364007 DHRS4L2Q6PKH6 230 aa0.45□□□□□ -2.34
RNU6-560P-201ENST00000364007 GLIPR1L1Q6UWM5 242 aa0.45□□□□□ -2.34
RNU6-560P-201ENST00000364007 CEP19Q96LK0 163 aa0.45□□□□□ -2.34
RNU6-560P-201ENST00000364007 HYLS1Q96M11 299 aa0.45□□□□□ -2.34
RNU6-560P-201ENST00000364007 ZNF714Q96N38 554 aa0.45□□□□□ -2.34
RNU6-560P-201ENST00000364007 PRRT1Q99946 306 aa0.45□□□□□ -2.34
RNU6-560P-201ENST00000364007 PRNDQ9UKY0 176 aa0.45□□□□□ -2.34
RNU6-560P-201ENST00000364007 NCAPD3P42695 1498 aa0.45□□□□□ -2.34
RNU6-560P-201ENST00000364007 NUP210Q8TEM1 1887 aaPredicted RBP0.44□□□□□ -2.34
RNU6-560P-201ENST00000364007 TRAV23DV6A0A075B6W5 121 aa0.44□□□□□ -2.34
RNU6-560P-201ENST00000364007 A0A0D9SG42 100 aa0.44□□□□□ -2.34
RNU6-560P-201ENST00000364007 C9orf170A2RU37 121 aa0.44□□□□□ -2.34
RNU6-560P-201ENST00000364007 PHGR1C9JFL3 82 aa0.44□□□□□ -2.34
RNU6-560P-201ENST00000364007 EIF3IQ13347 325 aaKnown RBP0.44□□□□□ -2.34
RNU6-560P-201ENST00000364007 SNCBQ16143 134 aa0.44□□□□□ -2.34
RNU6-560P-201ENST00000364007 HACD4Q5VWC8 232 aa0.44□□□□□ -2.34
RNU6-560P-201ENST00000364007 PAIP2Q9BPZ3 127 aaKnown RBP0.44□□□□□ -2.34
RNU6-560P-201ENST00000364007 OR2J1Q9GZK6 312 aa0.44□□□□□ -2.34
RNU6-560P-201ENST00000364007 SS18L2Q9UHA2 77 aa0.44□□□□□ -2.34
RNU6-560P-201ENST00000364007 ASB4Q9Y574 426 aa0.44□□□□□ -2.34
RNU6-560P-201ENST00000364007 UHRF1BP1Q6BDS2 1440 aa0.44□□□□□ -2.34
RNU6-560P-201ENST00000364007 ERBINQ96RT1 1412 aa0.44□□□□□ -2.34
RNU6-560P-201ENST00000364007 LOC285556D6RIA3 1793 aa0.44□□□□□ -2.34
RNU6-560P-201ENST00000364007 ANK1P16157 1881 aa0.44□□□□□ -2.34
RNU6-560P-201ENST00000364007 APCP25054 2843 aa0.43□□□□□ -2.34
RNU6-560P-201ENST00000364007 C5orf67F2Z3F1 127 aa0.43□□□□□ -2.34
RNU6-560P-201ENST00000364007 K7EIL1 84 aa0.43□□□□□ -2.34
RNU6-560P-201ENST00000364007 PRH1P02810 166 aa0.43□□□□□ -2.34
RNU6-560P-201ENST00000364007 TRGC2P03986 189 aa0.43□□□□□ -2.34
RNU6-560P-201ENST00000364007 CD14P08571 375 aa0.43□□□□□ -2.34
RNU6-560P-201ENST00000364007 KLRD1Q13241 179 aa0.43□□□□□ -2.34
RNU6-560P-201ENST00000364007 MSMO1Q15800 293 aa0.43□□□□□ -2.34
RNU6-560P-201ENST00000364007 IFT20Q8IY31 132 aa0.43□□□□□ -2.34
RNU6-560P-201ENST00000364007 GPX7Q96SL4 187 aaPredicted RBP0.43□□□□□ -2.34
RNU6-560P-201ENST00000364007 CACYBPQ9HB71 228 aaKnown RBP0.43□□□□□ -2.34
RNU6-560P-201ENST00000364007 CD109Q6YHK3 1445 aa0.43□□□□□ -2.34
RNU6-560P-201ENST00000364007 TRAV27A0A087WT01 109 aa0.42□□□□□ -2.34
RNU6-560P-201ENST00000364007 hDV103S1A0JD37 113 aa0.42□□□□□ -2.34
RNU6-560P-201ENST00000364007 NUPR2A6NF83 97 aa0.42□□□□□ -2.34
RNU6-560P-201ENST00000364007 AIPO00170 330 aa0.42□□□□□ -2.34
RNU6-560P-201ENST00000364007 ATP5HO75947 161 aa0.42□□□□□ -2.34
RNU6-560P-201ENST00000364007 LRRC18Q8N456 261 aa0.42□□□□□ -2.34
RNU6-560P-201ENST00000364007 PPTC7Q8NI37 304 aa0.42□□□□□ -2.34
RNU6-560P-201ENST00000364007 NAV3Q8IVL0 2385 aa0.42□□□□□ -2.34
RNU6-560P-201ENST00000364007 KNTC1P50748 2209 aa0.42□□□□□ -2.34
RNU6-560P-201ENST00000364007 NISCHQ9Y2I1 1504 aa0.42□□□□□ -2.34
RNU6-560P-201ENST00000364007 ATG2AQ2TAZ0 1938 aa0.42□□□□□ -2.34
RNU6-560P-201ENST00000364007 TRPM7Q96QT4 1865 aa0.41□□□□□ -2.34
RNU6-560P-201ENST00000364007 H7C1C5 153 aa0.41□□□□□ -2.34
RNU6-560P-201ENST00000364007 RER1O15258 196 aa0.41□□□□□ -2.34
RNU6-560P-201ENST00000364007 PHBP35232 272 aa0.41□□□□□ -2.34
RNU6-560P-201ENST00000364007 LCN6P62502 163 aa0.41□□□□□ -2.34
RNU6-560P-201ENST00000364007 SPATA45Q537H7 98 aa0.41□□□□□ -2.34
RNU6-560P-201ENST00000364007 SPINK9Q5DT21 86 aa0.41□□□□□ -2.34
RNU6-560P-201ENST00000364007 OR10AC1Q8NH08 325 aa0.41□□□□□ -2.34
RNU6-560P-201ENST00000364007 OR10AG1Q8NH19 301 aa0.41□□□□□ -2.34
RNU6-560P-201ENST00000364007 CAMSAP2Q08AD1 1489 aa0.41□□□□□ -2.34
RNU6-560P-201ENST00000364007 CACNA1EQ15878 2313 aa0.41□□□□□ -2.34
RNU6-560P-201ENST00000364007 BCL9O00512 1426 aa0.4□□□□□ -2.34
RNU6-560P-201ENST00000364007 RIIAD1A6NNX1 92 aa0.4□□□□□ -2.35
RNU6-560P-201ENST00000364007 VBP1P61758 197 aa0.4□□□□□ -2.35
RNU6-560P-201ENST00000364007 SCGB2B2Q4G0G5 96 aa0.4□□□□□ -2.35
RNU6-560P-201ENST00000364007 AKR1C8PQ5T2L2 129 aa0.4□□□□□ -2.35
RNU6-560P-201ENST00000364007 GINS3Q9BRX5 216 aa0.4□□□□□ -2.35
RNU6-560P-201ENST00000364007 LYRM2Q9NU23 88 aaPredicted RBP0.4□□□□□ -2.35
RNU6-560P-201ENST00000364007 SSR3Q9UNL2 185 aa0.4□□□□□ -2.35
RNU6-560P-201ENST00000364007 NINQ8N4C6 2090 aa0.4□□□□□ -2.35
RNU6-560P-201ENST00000364007 KIAA1549LQ6ZVL6 1849 aa0.4□□□□□ -2.35
RNU6-560P-201ENST00000364007 TNCP24821 2201 aa0.4□□□□□ -2.35
RNU6-560P-201ENST00000364007 HIST1H2BKO60814 126 aa0.39□□□□□ -2.35
RNU6-560P-201ENST00000364007 IFNA14P01570 189 aa0.39□□□□□ -2.35
RNU6-560P-201ENST00000364007 HIST1H2BJP06899 126 aa0.39□□□□□ -2.35
RNU6-560P-201ENST00000364007 OGNP20774 298 aaKnown RBP0.39□□□□□ -2.35
RNU6-560P-201ENST00000364007 SMR3AQ99954 134 aa0.39□□□□□ -2.35
RNU6-560P-201ENST00000364007 PBDC1Q9BVG4 233 aa0.39□□□□□ -2.35
RNU6-560P-201ENST00000364007 MAP1LC3BQ9GZQ8 125 aa0.39□□□□□ -2.35
RNU6-560P-201ENST00000364007 NIT2Q9NQR4 276 aa0.39□□□□□ -2.35
RNU6-560P-201ENST00000364007 KCPQ6ZWJ8 1503 aa0.38□□□□□ -2.35
RNU6-560P-201ENST00000364007 APOA2P02652 100 aa0.38□□□□□ -2.35
RNU6-560P-201ENST00000364007 IFNA4P05014 189 aa0.38□□□□□ -2.35
RNU6-560P-201ENST00000364007 IDO1P14902 403 aa0.38□□□□□ -2.35
RNU6-560P-201ENST00000364007 FOXA3P55318 350 aaPredicted RBP0.38□□□□□ -2.35
RNU6-560P-201ENST00000364007 ARF6P62330 175 aa0.38□□□□□ -2.35
RNU6-560P-201ENST00000364007 MRPS15P82914 257 aaKnown RBP0.38□□□□□ -2.35
RNU6-560P-201ENST00000364007 CIRBPQ14011 172 aaKnown RBP0.38□□□□□ -2.35
RNU6-560P-201ENST00000364007 LIMD2Q9BT23 127 aa0.38□□□□□ -2.35
RNU6-560P-201ENST00000364007 SH3BGRL3Q9H299 93 aa0.38□□□□□ -2.35
RNU6-560P-201ENST00000364007 NAV2Q8IVL1 2488 aa0.38□□□□□ -2.35
RNU6-560P-201ENST00000364007 AHNAKQ09666 5890 aaKnown RBP0.38□□□□□ -2.35
RNU6-560P-201ENST00000364007 MFSD11O43934 449 aa0.37□□□□□ -2.35
RNU6-560P-201ENST00000364007 PIAS1O75925 651 aa0.37□□□□□ -2.35
RNU6-560P-201ENST00000364007 IFNA1P01562 189 aa0.37□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 208.7 ms