RNA–Protein interactions for RNA: ENST00000354822.6

NKX2-1-201, Transcript of NK2 homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene NKX2-1, Length 2,191 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-201ENST00000354822 TDRG1Q3Y452 100 aa17.43■□□□□ 0.38
NKX2-1-201ENST00000354822 FAM19A2Q8N3H0 131 aa17.43■□□□□ 0.38
NKX2-1-201ENST00000354822 NTF3P20783 257 aa17.43■□□□□ 0.38
NKX2-1-201ENST00000354822 Q8N976 141 aa17.43■□□□□ 0.38
NKX2-1-201ENST00000354822 ZC2HC1AQ96GY0 325 aa17.43■□□□□ 0.38
NKX2-1-201ENST00000354822 MIEN1Q9BRT3 115 aa17.43■□□□□ 0.38
NKX2-1-201ENST00000354822 RNF114Q9Y508 228 aa17.43■□□□□ 0.38
NKX2-1-201ENST00000354822 C19orf84I3L1E1 186 aa17.42■□□□□ 0.38
NKX2-1-201ENST00000354822 MRPL52Q86TS9 123 aaKnown RBP17.42■□□□□ 0.38
NKX2-1-201ENST00000354822 DCHS2Q6V1P9 2916 aa17.42■□□□□ 0.38
NKX2-1-201ENST00000354822 CHEK1O14757 476 aa17.42■□□□□ 0.38
NKX2-1-201ENST00000354822 PAM16Q9Y3D7 125 aa17.42■□□□□ 0.38
NKX2-1-201ENST00000354822 M0R143 59 aa17.41■□□□□ 0.38
NKX2-1-201ENST00000354822 CTSGP08311 255 aa17.41■□□□□ 0.38
NKX2-1-201ENST00000354822 C3orf79P0CE67 100 aa17.41■□□□□ 0.38
NKX2-1-201ENST00000354822 LMO4P61968 165 aa17.41■□□□□ 0.38
NKX2-1-201ENST00000354822 KLK9Q2XQG4 91 aa17.41■□□□□ 0.38
NKX2-1-201ENST00000354822 NDFIP1Q9BT67 221 aa17.41■□□□□ 0.38
NKX2-1-201ENST00000354822 KLK9Q9UKQ9 250 aa17.41■□□□□ 0.38
NKX2-1-201ENST00000354822 A0A1B0GV90 55 aa17.4■□□□□ 0.38
NKX2-1-201ENST00000354822 FBLL1A6NHQ2 334 aaKnown RBP17.4■□□□□ 0.38
NKX2-1-201ENST00000354822 FAM110DQ8TAY7 271 aaPredicted RBP17.4■□□□□ 0.38
NKX2-1-201ENST00000354822 RABAC1Q9UI14 185 aa17.4■□□□□ 0.38
NKX2-1-201ENST00000354822 TACC2O95359 2948 aa17.4■□□□□ 0.38
NKX2-1-201ENST00000354822 OR2T8A6NH00 312 aa17.4■□□□□ 0.38
NKX2-1-201ENST00000354822 AJUBAQ96IF1 538 aa17.4■□□□□ 0.38
NKX2-1-201ENST00000354822 A0A1B0GW15 77 aa17.39■□□□□ 0.37
NKX2-1-201ENST00000354822 ZNF785A8K8V0 405 aa17.39■□□□□ 0.37
NKX2-1-201ENST00000354822 M0R2Z0 102 aa17.39■□□□□ 0.37
NKX2-1-201ENST00000354822 RAB4AP20338 218 aa17.39■□□□□ 0.37
NKX2-1-201ENST00000354822 Q6AWC8 147 aa17.39■□□□□ 0.37
NKX2-1-201ENST00000354822 RNASEKQ6P5S7 137 aaKnown RBP17.39■□□□□ 0.37
NKX2-1-201ENST00000354822 BCL6BQ8N143 479 aaPredicted RBP17.39■□□□□ 0.37
NKX2-1-201ENST00000354822 BPESC1Q9GZL8 116 aa17.39■□□□□ 0.37
NKX2-1-201ENST00000354822 HRNRQ86YZ3 2850 aaPredicted RBP17.39■□□□□ 0.37
NKX2-1-201ENST00000354822 A0A1B0GUT8 65 aa17.39■□□□□ 0.37
NKX2-1-201ENST00000354822 APOHP02749 345 aaPredicted RBP17.39■□□□□ 0.37
NKX2-1-201ENST00000354822 CT45A10P0DMU9 189 aa17.39■□□□□ 0.37
NKX2-1-201ENST00000354822 RIGQ13278 110 aa17.39■□□□□ 0.37
NKX2-1-201ENST00000354822 FAM120AOSQ5T036 256 aa17.39■□□□□ 0.37
NKX2-1-201ENST00000354822 DMRTA1Q5VZB9 504 aa17.39■□□□□ 0.37
NKX2-1-201ENST00000354822 CYB5R2Q6BCY4 276 aa17.39■□□□□ 0.37
NKX2-1-201ENST00000354822 ZNF705AQ6ZN79 300 aaPredicted RBP17.39■□□□□ 0.37
NKX2-1-201ENST00000354822 CHCHD1Q96BP2 118 aaKnown RBP17.39■□□□□ 0.37
NKX2-1-201ENST00000354822 M0R3E3 92 aa17.38■□□□□ 0.37
NKX2-1-201ENST00000354822 SAA4P35542 130 aa17.38■□□□□ 0.37
NKX2-1-201ENST00000354822 TMUB1Q9BVT8 246 aa17.38■□□□□ 0.37
NKX2-1-201ENST00000354822 LOC102724200A0A096LPH7 203 aaPredicted RBP17.38■□□□□ 0.37
NKX2-1-201ENST00000354822 SH2D7A6NKC9 451 aaPredicted RBP17.38■□□□□ 0.37
NKX2-1-201ENST00000354822 IGHV3-23P01764 117 aa17.38■□□□□ 0.37
NKX2-1-201ENST00000354822 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP17.37■□□□□ 0.37
NKX2-1-201ENST00000354822 M0QZK8 103 aa17.37■□□□□ 0.37
NKX2-1-201ENST00000354822 PMCHL1Q16048 86 aa17.37■□□□□ 0.37
NKX2-1-201ENST00000354822 UNQ5815/PRO19632Q6UWF5 114 aa17.37■□□□□ 0.37
NKX2-1-201ENST00000354822 SNHG12Q9BXW3 62 aa17.37■□□□□ 0.37
NKX2-1-201ENST00000354822 FAM181BA6NEQ2 426 aa17.36■□□□□ 0.37
NKX2-1-201ENST00000354822 OVOL3O00110 214 aa17.36■□□□□ 0.37
NKX2-1-201ENST00000354822 SAPCD1Q5SSQ6 148 aa17.36■□□□□ 0.37
NKX2-1-201ENST00000354822 CRIP1P50238 77 aa17.36■□□□□ 0.37
NKX2-1-201ENST00000354822 RAB9AP51151 201 aa17.36■□□□□ 0.37
NKX2-1-201ENST00000354822 COX8CQ7Z4L0 72 aa17.36■□□□□ 0.37
NKX2-1-201ENST00000354822 GATD1Q8NB37 220 aa17.36■□□□□ 0.37
NKX2-1-201ENST00000354822 EREGO14944 169 aa17.35■□□□□ 0.37
NKX2-1-201ENST00000354822 SSTP61278 116 aa17.35■□□□□ 0.37
NKX2-1-201ENST00000354822 ZNF502Q8TBZ5 544 aa17.35■□□□□ 0.37
NKX2-1-201ENST00000354822 SPTBN1Q01082 2364 aaKnown RBP17.35■□□□□ 0.37
NKX2-1-201ENST00000354822 NPFFO15130 113 aa17.35■□□□□ 0.37
NKX2-1-201ENST00000354822 BTF3P20290 206 aaKnown RBP17.35■□□□□ 0.37
NKX2-1-201ENST00000354822 CTRLP40313 264 aa17.34■□□□□ 0.37
NKX2-1-201ENST00000354822 C15orf32Q32M92 178 aa17.34■□□□□ 0.37
NKX2-1-201ENST00000354822 CENPVL3A0A0U1RRI6 287 aa17.33■□□□□ 0.37
NKX2-1-201ENST00000354822 SPATA45Q537H7 98 aa17.33■□□□□ 0.37
NKX2-1-201ENST00000354822 Q71RC1 249 aaPredicted RBP17.33■□□□□ 0.37
NKX2-1-201ENST00000354822 URB1-AS1Q96HZ7 61 aa17.33■□□□□ 0.37
NKX2-1-201ENST00000354822 PIEZO1Q92508 2521 aa17.33■□□□□ 0.37
NKX2-1-201ENST00000354822 ATP6V0E1O15342 81 aa17.33■□□□□ 0.36
NKX2-1-201ENST00000354822 ECSCRQ19T08 205 aa17.33■□□□□ 0.36
NKX2-1-201ENST00000354822 CACNA1AO00555 2505 aa17.33■□□□□ 0.36
NKX2-1-201ENST00000354822 WNK2Q9Y3S1 2297 aa17.32■□□□□ 0.36
NKX2-1-201ENST00000354822 LINC00614P0C842 121 aa17.32■□□□□ 0.36
NKX2-1-201ENST00000354822 RHOGP84095 191 aa17.32■□□□□ 0.36
NKX2-1-201ENST00000354822 KLHDC1Q8N7A1 406 aa17.32■□□□□ 0.36
NKX2-1-201ENST00000354822 ITPR1Q14643 2758 aa17.32■□□□□ 0.36
NKX2-1-201ENST00000354822 C8orf49Q96NF6 230 aa17.32■□□□□ 0.36
NKX2-1-201ENST00000354822 GOSR1O95249 250 aa17.31■□□□□ 0.36
NKX2-1-201ENST00000354822 ARMS2P0C7Q2 107 aa17.31■□□□□ 0.36
NKX2-1-201ENST00000354822 NUTF2P61970 127 aaKnown RBP17.31■□□□□ 0.36
NKX2-1-201ENST00000354822 EBLN2Q6P2I7 272 aa17.31■□□□□ 0.36
NKX2-1-201ENST00000354822 SMAD5-AS1Q9Y6J3 95 aa17.31■□□□□ 0.36
NKX2-1-201ENST00000354822 C2orf70A6NJV1 201 aa17.3■□□□□ 0.36
NKX2-1-201ENST00000354822 CLEC3BP05452 202 aa17.3■□□□□ 0.36
NKX2-1-201ENST00000354822 GPR183P32249 361 aa17.3■□□□□ 0.36
NKX2-1-201ENST00000354822 PIP4P2Q8N4L2 257 aa17.3■□□□□ 0.36
NKX2-1-201ENST00000354822 TMEM189A5PLL7 270 aa17.3■□□□□ 0.36
NKX2-1-201ENST00000354822 OR5AL1P0C617 328 aa17.3■□□□□ 0.36
NKX2-1-201ENST00000354822 RELQ04864 619 aaPredicted RBP17.3■□□□□ 0.36
NKX2-1-201ENST00000354822 PRR25Q96S07 402 aa17.3■□□□□ 0.36
NKX2-1-201ENST00000354822 ASCL2Q99929 193 aa17.29■□□□□ 0.36
NKX2-1-201ENST00000354822 UQCR10Q9UDW1 63 aa17.29■□□□□ 0.36
NKX2-1-201ENST00000354822 C20orf202A1L168 122 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms