RNA–Protein interactions for RNA: ENST00000354363.10

PRPF40A-201, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 1,622 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-201ENST00000354363 BAK1Q16611 211 aa10.15□□□□□ -0.78
PRPF40A-201ENST00000354363 SPANXN2Q5MJ10 180 aa10.15□□□□□ -0.78
PRPF40A-201ENST00000354363 ZNF575Q86XF7 245 aa10.15□□□□□ -0.78
PRPF40A-201ENST00000354363 TMEM256Q8N2U0 113 aa10.15□□□□□ -0.78
PRPF40A-201ENST00000354363 ATG101Q9BSB4 218 aa10.15□□□□□ -0.78
PRPF40A-201ENST00000354363 ARL6Q9H0F7 186 aa10.15□□□□□ -0.78
PRPF40A-201ENST00000354363 PPP1R14DQ9NXH3 145 aa10.15□□□□□ -0.78
PRPF40A-201ENST00000354363 F5H768 121 aa10.15□□□□□ -0.79
PRPF40A-201ENST00000354363 INPP1P49441 399 aa10.15□□□□□ -0.79
PRPF40A-201ENST00000354363 TAS2R60P59551 318 aa10.15□□□□□ -0.79
PRPF40A-201ENST00000354363 SLC38A11Q08AI6 406 aa10.15□□□□□ -0.79
PRPF40A-201ENST00000354363 S100A7AQ86SG5 101 aa10.15□□□□□ -0.79
PRPF40A-201ENST00000354363 LRRC20Q8TCA0 184 aa10.15□□□□□ -0.79
PRPF40A-201ENST00000354363 ARV1Q9H2C2 271 aa10.15□□□□□ -0.79
PRPF40A-201ENST00000354363 SCGB1D2O95969 90 aa10.14□□□□□ -0.79
PRPF40A-201ENST00000354363 NUDT3O95989 172 aa10.14□□□□□ -0.79
PRPF40A-201ENST00000354363 ATP5G1P05496 136 aa10.14□□□□□ -0.79
PRPF40A-201ENST00000354363 ATP5G3P48201 142 aa10.14□□□□□ -0.79
PRPF40A-201ENST00000354363 TRIQKQ629K1 86 aa10.14□□□□□ -0.79
PRPF40A-201ENST00000354363 TEPPQ6URK8 271 aa10.14□□□□□ -0.79
PRPF40A-201ENST00000354363 OR10P1Q8NGE3 313 aa10.14□□□□□ -0.79
PRPF40A-201ENST00000354363 RPUSD4Q96CM3 377 aaKnown RBP10.14□□□□□ -0.79
PRPF40A-201ENST00000354363 C16orf74Q96GX8 76 aa10.14□□□□□ -0.79
PRPF40A-201ENST00000354363 RBM38Q9H0Z9 239 aaKnown RBP10.14□□□□□ -0.79
PRPF40A-201ENST00000354363 MGAT4CQ9UBM8 478 aa10.14□□□□□ -0.79
PRPF40A-201ENST00000354363 CBY3A6NI87 242 aa10.13□□□□□ -0.79
PRPF40A-201ENST00000354363 ANXA7P20073 488 aaKnown RBP10.13□□□□□ -0.79
PRPF40A-201ENST00000354363 BTCP35070 178 aa10.13□□□□□ -0.79
PRPF40A-201ENST00000354363 TAS2R30P59541 319 aa10.13□□□□□ -0.79
PRPF40A-201ENST00000354363 ARL16Q0P5N6 197 aa10.13□□□□□ -0.79
PRPF40A-201ENST00000354363 IAH1Q2TAA2 248 aaPredicted RBP10.13□□□□□ -0.79
PRPF40A-201ENST00000354363 C4orf46Q504U0 113 aa10.13□□□□□ -0.79
PRPF40A-201ENST00000354363 ZNRF2Q8NHG8 242 aa10.13□□□□□ -0.79
PRPF40A-201ENST00000354363 ZNF331Q9NQX6 463 aaPredicted RBP10.13□□□□□ -0.79
PRPF40A-201ENST00000354363 RCL1Q9Y2P8 373 aaKnown RBP10.13□□□□□ -0.79
PRPF40A-201ENST00000354363 LINC00854A0A1B0GVQ3 168 aa10.12□□□□□ -0.79
PRPF40A-201ENST00000354363 TSC22D2O75157 780 aa10.12□□□□□ -0.79
PRPF40A-201ENST00000354363 HTN1P15515 57 aa10.12□□□□□ -0.79
PRPF40A-201ENST00000354363 CXCL2P19875 107 aa10.12□□□□□ -0.79
PRPF40A-201ENST00000354363 CDKN1BP46527 198 aa10.12□□□□□ -0.79
PRPF40A-201ENST00000354363 PXDC1Q5TGL8 231 aa10.12□□□□□ -0.79
PRPF40A-201ENST00000354363 LCN15Q6UWW0 184 aa10.12□□□□□ -0.79
PRPF40A-201ENST00000354363 LINC00305Q7Z4B0 112 aa10.12□□□□□ -0.79
PRPF40A-201ENST00000354363 ZBTB8BQ8NAP8 495 aaPredicted RBP10.12□□□□□ -0.79
PRPF40A-201ENST00000354363 SDHCQ99643 169 aaPredicted RBP10.12□□□□□ -0.79
PRPF40A-201ENST00000354363 RNF24Q9Y225 148 aa10.12□□□□□ -0.79
PRPF40A-201ENST00000354363 TIMM8BQ9Y5J9 83 aaPredicted RBP10.12□□□□□ -0.79
PRPF40A-201ENST00000354363 NBDYA0A0U1RRE5 68 aa10.11□□□□□ -0.79
PRPF40A-201ENST00000354363 GOSR2O14653 212 aa10.11□□□□□ -0.79
PRPF40A-201ENST00000354363 AGPAT2O15120 278 aa10.11□□□□□ -0.79
PRPF40A-201ENST00000354363 SNRPCP09234 159 aaKnown RBP10.11□□□□□ -0.79
PRPF40A-201ENST00000354363 TNP2Q05952 138 aa10.11□□□□□ -0.79
PRPF40A-201ENST00000354363 ZNF546Q86UE3 836 aa10.11□□□□□ -0.79
PRPF40A-201ENST00000354363 RNASE8Q8TDE3 154 aaKnown RBP10.11□□□□□ -0.79
PRPF40A-201ENST00000354363 RNF141Q8WVD5 230 aa10.11□□□□□ -0.79
PRPF40A-201ENST00000354363 SLC50A1Q9BRV3 221 aa10.11□□□□□ -0.79
PRPF40A-201ENST00000354363 GSKIPQ9P0R6 139 aa10.11□□□□□ -0.79
PRPF40A-201ENST00000354363 HSPG2P98160 4391 aa10.11□□□□□ -0.79
PRPF40A-201ENST00000354363 ABCA13Q86UQ4 5058 aa10.11□□□□□ -0.79
PRPF40A-201ENST00000354363 KIR3DS1Q14943 382 aa10.11□□□□□ -0.79
PRPF40A-201ENST00000354363 ZNF493Q6ZR52 646 aa10.11□□□□□ -0.79
PRPF40A-201ENST00000354363 TMEM263Q8WUH6 116 aaKnown RBP10.11□□□□□ -0.79
PRPF40A-201ENST00000354363 NOP10Q9NPE3 64 aaKnown RBP10.11□□□□□ -0.79
PRPF40A-201ENST00000354363 LINC00588Q9Y4M8 146 aa10.11□□□□□ -0.79
PRPF40A-201ENST00000354363 C7orf66A4D0T2 115 aa10.1□□□□□ -0.79
PRPF40A-201ENST00000354363 MBPP02686 304 aaPredicted RBP10.1□□□□□ -0.79
PRPF40A-201ENST00000354363 CCL18P55774 89 aa10.1□□□□□ -0.79
PRPF40A-201ENST00000354363 BPIFA4PQ86YQ2 179 aa10.1□□□□□ -0.79
PRPF40A-201ENST00000354363 C6orf223Q8N319 242 aa10.1□□□□□ -0.79
PRPF40A-201ENST00000354363 MITD1Q8WV92 249 aa10.1□□□□□ -0.79
PRPF40A-201ENST00000354363 TMEM37Q8WXS4 190 aa10.1□□□□□ -0.79
PRPF40A-201ENST00000354363 MGST2Q99735 147 aa10.1□□□□□ -0.79
PRPF40A-201ENST00000354363 C20orf144Q9BQM9 153 aa10.1□□□□□ -0.79
PRPF40A-201ENST00000354363 GGACTQ9BVM4 153 aa10.1□□□□□ -0.79
PRPF40A-201ENST00000354363 PARD6GQ9BYG4 376 aaPredicted RBP10.1□□□□□ -0.79
PRPF40A-201ENST00000354363 LRP1BQ9NZR2 4599 aa10.1□□□□□ -0.79
PRPF40A-201ENST00000354363 CENPXA8MT69 81 aa10.09□□□□□ -0.79
PRPF40A-201ENST00000354363 PRAC2D3DTV9 90 aa10.09□□□□□ -0.79
PRPF40A-201ENST00000354363 H3BTX0 84 aa10.09□□□□□ -0.79
PRPF40A-201ENST00000354363 H7BYZ3 331 aa10.09□□□□□ -0.79
PRPF40A-201ENST00000354363 ZNF701M0R085 212 aaPredicted RBP10.09□□□□□ -0.79
PRPF40A-201ENST00000354363 SLC17A3O00476 420 aa10.09□□□□□ -0.79
PRPF40A-201ENST00000354363 COX7A2P2O60397 106 aa10.09□□□□□ -0.79
PRPF40A-201ENST00000354363 MORN5Q5VZ52 161 aa10.09□□□□□ -0.79
PRPF40A-201ENST00000354363 OPCMLQ14982 345 aa10.08□□□□□ -0.8
PRPF40A-201ENST00000354363 KRTAP4-5Q9BYR2 181 aa10.08□□□□□ -0.8
PRPF40A-201ENST00000354363 IGLC2P0DOY2 106 aa10.07□□□□□ -0.8
PRPF40A-201ENST00000354363 GFI1BQ5VTD9 330 aa10.07□□□□□ -0.8
PRPF40A-201ENST00000354363 C10orf113Q5VZT2 155 aa10.07□□□□□ -0.8
PRPF40A-201ENST00000354363 LINC00612Q8N6U2 182 aa10.07□□□□□ -0.8
PRPF40A-201ENST00000354363 OR10J6PQ8NGY7 276 aa10.07□□□□□ -0.8
PRPF40A-201ENST00000354363 PXMP4Q9Y6I8 212 aa10.07□□□□□ -0.8
PRPF40A-201ENST00000354363 C16orf90A8MZG2 172 aa10.07□□□□□ -0.8
PRPF40A-201ENST00000354363 H3BQ15 152 aa10.07□□□□□ -0.8
PRPF40A-201ENST00000354363 CCSO14618 274 aa10.07□□□□□ -0.8
PRPF40A-201ENST00000354363 IL7P13232 177 aa10.07□□□□□ -0.8
PRPF40A-201ENST00000354363 CLINT1Q14677 625 aa10.07□□□□□ -0.8
PRPF40A-201ENST00000354363 CNPY1Q3B7I2 92 aa10.07□□□□□ -0.8
PRPF40A-201ENST00000354363 SSX7Q7RTT5 188 aa10.07□□□□□ -0.8
PRPF40A-201ENST00000354363 SAT2Q96F10 170 aaPredicted RBP10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms