RNA–Protein interactions for RNA: ENST00000353739.8

RNF38-203, Transcript of ring finger protein 38, humanhuman

TSL 1 (best) BASIC

Gene RNF38, Length 4,945 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-203ENST00000353739 MAP1LC3CQ9BXW4 147 aa2.93□□□□□ -1.94
RNF38-203ENST00000353739 NRN1Q9NPD7 142 aa2.93□□□□□ -1.94
RNF38-203ENST00000353739 MRPL36Q9P0J6 103 aaKnown RBP2.93□□□□□ -1.94
RNF38-203ENST00000353739 UQCR10Q9UDW1 63 aa2.93□□□□□ -1.94
RNF38-203ENST00000353739 ZNF785A8K8V0 405 aa2.93□□□□□ -1.94
RNF38-203ENST00000353739 GRNP28799 593 aaKnown RBP2.93□□□□□ -1.94
RNF38-203ENST00000353739 C9orf152Q5JTZ5 239 aa2.93□□□□□ -1.94
RNF38-203ENST00000353739 ZNF493Q6ZR52 646 aa2.93□□□□□ -1.94
RNF38-203ENST00000353739 TMEM256Q8N2U0 113 aa2.93□□□□□ -1.94
RNF38-203ENST00000353739 TEX29Q8N6K0 151 aa2.93□□□□□ -1.94
RNF38-203ENST00000353739 ZNF502Q8TBZ5 544 aa2.93□□□□□ -1.94
RNF38-203ENST00000353739 C18orf32Q8TCD1 76 aa2.93□□□□□ -1.94
RNF38-203ENST00000353739 C14orf144Q96I85 54 aa2.93□□□□□ -1.94
RNF38-203ENST00000353739 ASCL2Q99929 193 aa2.93□□□□□ -1.94
RNF38-203ENST00000353739 ALKBH7Q9BT30 221 aaPredicted RBP2.93□□□□□ -1.94
RNF38-203ENST00000353739 TMEM191AQ9H0A3 160 aa2.93□□□□□ -1.94
RNF38-203ENST00000353739 LOC102724200A0A096LPH7 203 aaPredicted RBP2.93□□□□□ -1.94
RNF38-203ENST00000353739 IGHV3-21A0A0B4J1V1 117 aa2.93□□□□□ -1.94
RNF38-203ENST00000353739 FAM181BA6NEQ2 426 aa2.93□□□□□ -1.94
RNF38-203ENST00000353739 F2Z2F3 143 aa2.93□□□□□ -1.94
RNF38-203ENST00000353739 OVOL3O00110 214 aa2.93□□□□□ -1.94
RNF38-203ENST00000353739 MRPS12O15235 138 aaKnown RBP2.93□□□□□ -1.94
RNF38-203ENST00000353739 CACNG7P62955 275 aa2.93□□□□□ -1.94
RNF38-203ENST00000353739 ZNF664Q8N3J9 261 aa2.93□□□□□ -1.94
RNF38-203ENST00000353739 FAM168AQ92567 244 aa2.93□□□□□ -1.94
RNF38-203ENST00000353739 PGLYRP4Q96LB8 373 aa2.93□□□□□ -1.94
RNF38-203ENST00000353739 PRO1933Q9H354 126 aa2.93□□□□□ -1.94
RNF38-203ENST00000353739 TACC2O95359 2948 aa2.93□□□□□ -1.94
RNF38-203ENST00000353739 PCNX1Q96RV3 2341 aa2.93□□□□□ -1.94
RNF38-203ENST00000353739 IGHV7-81A0A0B4J1V7 117 aa2.93□□□□□ -1.94
RNF38-203ENST00000353739 TMEM89A2RUT3 159 aa2.93□□□□□ -1.94
RNF38-203ENST00000353739 J3QLI3 93 aa2.93□□□□□ -1.94
RNF38-203ENST00000353739 PPBPP02775 128 aa2.93□□□□□ -1.94
RNF38-203ENST00000353739 SLC25A16P16260 332 aa2.93□□□□□ -1.94
RNF38-203ENST00000353739 HIST1H1AQ02539 215 aaPredicted RBP2.93□□□□□ -1.94
RNF38-203ENST00000353739 Q6ZWC4 215 aa2.93□□□□□ -1.94
RNF38-203ENST00000353739 FA2HQ7L5A8 372 aa2.93□□□□□ -1.94
RNF38-203ENST00000353739 LHFPL4Q7Z7J7 247 aa2.93□□□□□ -1.94
RNF38-203ENST00000353739 Q8N9W7 124 aa2.93□□□□□ -1.94
RNF38-203ENST00000353739 LENEPQ9Y5L5 61 aa2.93□□□□□ -1.94
RNF38-203ENST00000353739 ZGRF1Q86YA3 2104 aa2.92□□□□□ -1.94
RNF38-203ENST00000353739 HEATR1Q9H583 2144 aaKnown RBP2.92□□□□□ -1.94
RNF38-203ENST00000353739 LRBAP50851 2863 aa2.92□□□□□ -1.94
RNF38-203ENST00000353739 IGHV1-69DA0A0B4J2H0 117 aa2.92□□□□□ -1.94
RNF38-203ENST00000353739 IGHV1-69P01742 117 aa2.92□□□□□ -1.94
RNF38-203ENST00000353739 CDKN1AP38936 164 aa2.92□□□□□ -1.94
RNF38-203ENST00000353739 PAX8Q06710 450 aa2.92□□□□□ -1.94
RNF38-203ENST00000353739 SPATA45Q537H7 98 aa2.92□□□□□ -1.94
RNF38-203ENST00000353739 FANCD2OSQ96PS1 177 aa2.92□□□□□ -1.94
RNF38-203ENST00000353739 TMEM70Q9BUB7 260 aa2.92□□□□□ -1.94
RNF38-203ENST00000353739 MEGF9Q9H1U4 602 aa2.92□□□□□ -1.94
RNF38-203ENST00000353739 POLEQ07864 2286 aa2.92□□□□□ -1.94
RNF38-203ENST00000353739 TRAV41A0A0B4J266 112 aa2.92□□□□□ -1.94
RNF38-203ENST00000353739 APELAP0DMC3 54 aa2.92□□□□□ -1.94
RNF38-203ENST00000353739 CAMPP49913 170 aa2.92□□□□□ -1.94
RNF38-203ENST00000353739 ASPHD1Q5U4P2 390 aa2.92□□□□□ -1.94
RNF38-203ENST00000353739 ZNF705AQ6ZN79 300 aaPredicted RBP2.92□□□□□ -1.94
RNF38-203ENST00000353739 C9orf139Q6ZV77 190 aa2.92□□□□□ -1.94
RNF38-203ENST00000353739 NPFFR1Q9GZQ6 430 aa2.92□□□□□ -1.94
RNF38-203ENST00000353739 A0A0G2JLM5 398 aa2.92□□□□□ -1.94
RNF38-203ENST00000353739 SH2D7A6NKC9 451 aaPredicted RBP2.92□□□□□ -1.94
RNF38-203ENST00000353739 SPINK4O60575 86 aa2.92□□□□□ -1.94
RNF38-203ENST00000353739 IGLV2-11P01706 119 aa2.92□□□□□ -1.94
RNF38-203ENST00000353739 IGHV3-48P01763 117 aa2.92□□□□□ -1.94
RNF38-203ENST00000353739 SAA4P35542 130 aa2.92□□□□□ -1.94
RNF38-203ENST00000353739 RHOGP84095 191 aa2.92□□□□□ -1.94
RNF38-203ENST00000353739 SLAQ13239 276 aa2.92□□□□□ -1.94
RNF38-203ENST00000353739 ECSCRQ19T08 205 aa2.92□□□□□ -1.94
RNF38-203ENST00000353739 C5orf56Q8N8D9 126 aa2.92□□□□□ -1.94
RNF38-203ENST00000353739 MS4A6AQ9H2W1 248 aa2.92□□□□□ -1.94
RNF38-203ENST00000353739 TP53TG3Q9ULZ0 132 aa2.92□□□□□ -1.94
RNF38-203ENST00000353739 CACNA1DQ01668 2161 aa2.92□□□□□ -1.94
RNF38-203ENST00000353739 CENPVL3A0A0U1RRI6 287 aa2.92□□□□□ -1.94
RNF38-203ENST00000353739 OR2T8A6NH00 312 aa2.92□□□□□ -1.94
RNF38-203ENST00000353739 CBY3A6NI87 242 aa2.92□□□□□ -1.94
RNF38-203ENST00000353739 OVOL1O14753 267 aa2.92□□□□□ -1.94
RNF38-203ENST00000353739 SH2D1AO60880 128 aa2.92□□□□□ -1.94
RNF38-203ENST00000353739 LINC00614P0C842 121 aa2.92□□□□□ -1.94
RNF38-203ENST00000353739 NIT1Q86X76 327 aa2.92□□□□□ -1.94
RNF38-203ENST00000353739 EXOC3-AS1Q8N2X6 119 aa2.92□□□□□ -1.94
RNF38-203ENST00000353739 OR10AG1Q8NH19 301 aa2.92□□□□□ -1.94
RNF38-203ENST00000353739 ZC2HC1AQ96GY0 325 aa2.92□□□□□ -1.94
RNF38-203ENST00000353739 ST20Q9HBF5 79 aa2.92□□□□□ -1.94
RNF38-203ENST00000353739 U3KQK5 164 aa2.92□□□□□ -1.94
RNF38-203ENST00000353739 ARID1AO14497 2285 aa2.91□□□□□ -1.94
RNF38-203ENST00000353739 TET2Q6N021 2002 aaPredicted RBP2.91□□□□□ -1.94
RNF38-203ENST00000353739 TRAV9-2A0A087WT02 112 aa2.91□□□□□ -1.94
RNF38-203ENST00000353739 FABP5P3A8MUU1 101 aa2.91□□□□□ -1.94
RNF38-203ENST00000353739 NDUFA4O00483 81 aa2.91□□□□□ -1.94
RNF38-203ENST00000353739 NTF3P20783 257 aa2.91□□□□□ -1.94
RNF38-203ENST00000353739 GNLYP22749 145 aa2.91□□□□□ -1.94
RNF38-203ENST00000353739 ZFP36P26651 326 aaKnown RBP2.91□□□□□ -1.94
RNF38-203ENST00000353739 CTRLP40313 264 aa2.91□□□□□ -1.94
RNF38-203ENST00000353739 HNRNPA3P51991 378 aaKnown RBP2.91□□□□□ -1.94
RNF38-203ENST00000353739 LMO4P61968 165 aa2.91□□□□□ -1.94
RNF38-203ENST00000353739 TMEM78Q5T7P6 136 aa2.91□□□□□ -1.94
RNF38-203ENST00000353739 LEMD1Q68G75 181 aa2.91□□□□□ -1.94
RNF38-203ENST00000353739 TCF24Q7RTU0 167 aa2.91□□□□□ -1.94
RNF38-203ENST00000353739 LINC00479Q96M42 142 aa2.91□□□□□ -1.94
RNF38-203ENST00000353739 CELSR1Q9NYQ6 3014 aa2.91□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms