RNA–Protein interactions for RNA: ENST00000351677.6

PTPN11-201, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPN11, Length 6,101 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-201ENST00000351677 GATA4P43694 442 aa12.91□□□□□ -0.34
PTPN11-201ENST00000351677 CADP27708 2225 aa12.91□□□□□ -0.34
PTPN11-201ENST00000351677 A0A087X0K7 114 aa12.91□□□□□ -0.34
PTPN11-201ENST00000351677 ZNF876PQ49A33 203 aa12.91□□□□□ -0.34
PTPN11-201ENST00000351677 DOPEY2Q9Y3R5 2298 aa12.91□□□□□ -0.34
PTPN11-201ENST00000351677 SYS1-DBNDD2H3BUS1 97 aa12.9□□□□□ -0.34
PTPN11-201ENST00000351677 IGLV3-1P01715 115 aa12.9□□□□□ -0.34
PTPN11-201ENST00000351677 ZNF833PQ6ZTB9 187 aa12.9□□□□□ -0.34
PTPN11-201ENST00000351677 PIP4P2Q8N4L2 257 aa12.9□□□□□ -0.34
PTPN11-201ENST00000351677 Q8TCH9 128 aa12.9□□□□□ -0.34
PTPN11-201ENST00000351677 ZNF134P52741 427 aa12.9□□□□□ -0.34
PTPN11-201ENST00000351677 LINC00477Q96M19 166 aa12.9□□□□□ -0.34
PTPN11-201ENST00000351677 RHPN1-AS1Q9BWJ2 59 aa12.9□□□□□ -0.34
PTPN11-201ENST00000351677 SAP30O75446 220 aa12.9□□□□□ -0.34
PTPN11-201ENST00000351677 MMP23AO75900 390 aa12.9□□□□□ -0.34
PTPN11-201ENST00000351677 ARMS2P0C7Q2 107 aa12.9□□□□□ -0.34
PTPN11-201ENST00000351677 MALP21145 153 aa12.9□□□□□ -0.34
PTPN11-201ENST00000351677 BEND2Q8NDZ0 799 aa12.9□□□□□ -0.34
PTPN11-201ENST00000351677 KIAA1671Q9BY89 1806 aa12.9□□□□□ -0.34
PTPN11-201ENST00000351677 DENND4CQ5VZ89 1909 aa12.9□□□□□ -0.34
PTPN11-201ENST00000351677 SLC25A2Q9BXI2 301 aa12.9□□□□□ -0.34
PTPN11-201ENST00000351677 MRPL27Q9P0M9 148 aaKnown RBP12.9□□□□□ -0.34
PTPN11-201ENST00000351677 CACNA1BQ00975 2339 aa12.9□□□□□ -0.34
PTPN11-201ENST00000351677 K7ENP7 123 aa12.9□□□□□ -0.35
PTPN11-201ENST00000351677 TMEM190Q8WZ59 177 aa12.9□□□□□ -0.35
PTPN11-201ENST00000351677 C15orf65H3BRN8 121 aa12.89□□□□□ -0.35
PTPN11-201ENST00000351677 TMEM158Q8WZ71 300 aa12.89□□□□□ -0.35
PTPN11-201ENST00000351677 DPH3P1Q9H4G8 78 aa12.89□□□□□ -0.35
PTPN11-201ENST00000351677 SMPXQ9UHP9 88 aa12.89□□□□□ -0.35
PTPN11-201ENST00000351677 PFN1P07737 140 aaKnown RBP12.89□□□□□ -0.35
PTPN11-201ENST00000351677 ZNF479Q96JC4 524 aa12.89□□□□□ -0.35
PTPN11-201ENST00000351677 WNK2Q9Y3S1 2297 aa12.89□□□□□ -0.35
PTPN11-201ENST00000351677 ATP6V0E1O15342 81 aa12.89□□□□□ -0.35
PTPN11-201ENST00000351677 SEC11AP67812 179 aa12.89□□□□□ -0.35
PTPN11-201ENST00000351677 OR2K2Q8NGT1 345 aa12.89□□□□□ -0.35
PTPN11-201ENST00000351677 TPSG1Q9NRR2 321 aa12.89□□□□□ -0.35
PTPN11-201ENST00000351677 DOCK11Q5JSL3 2073 aa12.89□□□□□ -0.35
PTPN11-201ENST00000351677 FAM223BA6NKX1 122 aa12.89□□□□□ -0.35
PTPN11-201ENST00000351677 SAMD5Q5TGI4 173 aa12.89□□□□□ -0.35
PTPN11-201ENST00000351677 ZNF562Q6V9R5 426 aa12.89□□□□□ -0.35
PTPN11-201ENST00000351677 FAM223AQ8IWN6 122 aa12.89□□□□□ -0.35
PTPN11-201ENST00000351677 OR5A1Q8NGJ0 315 aa12.89□□□□□ -0.35
PTPN11-201ENST00000351677 USMG5Q96IX5 58 aa12.89□□□□□ -0.35
PTPN11-201ENST00000351677 C8orf49Q96NF6 230 aa12.89□□□□□ -0.35
PTPN11-201ENST00000351677 NDUFB8O95169 186 aa12.88□□□□□ -0.35
PTPN11-201ENST00000351677 NPC2P61916 151 aa12.88□□□□□ -0.35
PTPN11-201ENST00000351677 PAX2Q02962 417 aa12.88□□□□□ -0.35
PTPN11-201ENST00000351677 CHCHD5Q9BSY4 110 aa12.88□□□□□ -0.35
PTPN11-201ENST00000351677 OVOL3O00110 214 aa12.88□□□□□ -0.35
PTPN11-201ENST00000351677 LOXP28300 417 aaPredicted RBP12.88□□□□□ -0.35
PTPN11-201ENST00000351677 PLA2G2CQ5R387 149 aa12.88□□□□□ -0.35
PTPN11-201ENST00000351677 HAPLN4Q86UW8 402 aa12.88□□□□□ -0.35
PTPN11-201ENST00000351677 C10orf126Q8N4M7 172 aa12.88□□□□□ -0.35
PTPN11-201ENST00000351677 TRAV8-2A0A0B4J237 113 aa12.88□□□□□ -0.35
PTPN11-201ENST00000351677 SRSF8Q9BRL6 282 aaKnown RBP12.88□□□□□ -0.35
PTPN11-201ENST00000351677 CSTL1Q9H114 145 aa12.88□□□□□ -0.35
PTPN11-201ENST00000351677 ADARB2-AS1A8MUL3 147 aa12.88□□□□□ -0.35
PTPN11-201ENST00000351677 BCL6BQ8N143 479 aaPredicted RBP12.88□□□□□ -0.35
PTPN11-201ENST00000351677 DIAPH2-AS1Q14236 149 aa12.87□□□□□ -0.35
PTPN11-201ENST00000351677 MSRB2Q9Y3D2 182 aa12.87□□□□□ -0.35
PTPN11-201ENST00000351677 A0A087WWL8 130 aa12.87□□□□□ -0.35
PTPN11-201ENST00000351677 IGLV1-44P01699 117 aa12.87□□□□□ -0.35
PTPN11-201ENST00000351677 RBMY1BA6NDE4 496 aaKnown RBP12.87□□□□□ -0.35
PTPN11-201ENST00000351677 RBMY1EA6NEQ0 496 aaKnown RBP12.87□□□□□ -0.35
PTPN11-201ENST00000351677 IGHV3-53P01767 116 aa12.87□□□□□ -0.35
PTPN11-201ENST00000351677 RBMY1DP0C7P1 496 aaKnown RBP12.87□□□□□ -0.35
PTPN11-201ENST00000351677 RBMY1A1P0DJD3 496 aaKnown RBP12.87□□□□□ -0.35
PTPN11-201ENST00000351677 RBMY1CP0DJD4 496 aa12.87□□□□□ -0.35
PTPN11-201ENST00000351677 MPV17L2Q567V2 206 aa12.87□□□□□ -0.35
PTPN11-201ENST00000351677 TMEM213A2RRL7 107 aa12.87□□□□□ -0.35
PTPN11-201ENST00000351677 PLNP26678 52 aa12.87□□□□□ -0.35
PTPN11-201ENST00000351677 TMEM95Q3KNT9 176 aa12.87□□□□□ -0.35
PTPN11-201ENST00000351677 IGFL3Q6UXB1 125 aa12.87□□□□□ -0.35
PTPN11-201ENST00000351677 DTX1Q86Y01 620 aa12.87□□□□□ -0.35
PTPN11-201ENST00000351677 OR9G4Q8NGQ1 327 aa12.87□□□□□ -0.35
PTPN11-201ENST00000351677 CEACAM8P31997 349 aaPredicted RBP12.87□□□□□ -0.35
PTPN11-201ENST00000351677 SPTAN1Q13813 2472 aaKnown RBP12.86□□□□□ -0.35
PTPN11-201ENST00000351677 PCNX1Q96RV3 2341 aa12.86□□□□□ -0.35
PTPN11-201ENST00000351677 GGTLC3B5MD39 225 aa12.86□□□□□ -0.35
PTPN11-201ENST00000351677 FAM215AQ9Y5M1 114 aa12.86□□□□□ -0.35
PTPN11-201ENST00000351677 G3V318 75 aa12.86□□□□□ -0.35
PTPN11-201ENST00000351677 ASPHD1Q5U4P2 390 aa12.86□□□□□ -0.35
PTPN11-201ENST00000351677 LCNL1Q6ZST4 164 aa12.86□□□□□ -0.35
PTPN11-201ENST00000351677 TRGV1A0A0A0MS02 117 aa12.86□□□□□ -0.35
PTPN11-201ENST00000351677 WT1-ASQ06250 92 aa12.86□□□□□ -0.35
PTPN11-201ENST00000351677 RIPPLY3P57055 190 aa12.85□□□□□ -0.35
PTPN11-201ENST00000351677 CFHR2P36980 270 aa12.85□□□□□ -0.35
PTPN11-201ENST00000351677 MAPK1IP1LQ8NDC0 245 aa12.85□□□□□ -0.35
PTPN11-201ENST00000351677 RPL35AP18077 110 aaKnown RBP12.85□□□□□ -0.35
PTPN11-201ENST00000351677 ZNF114Q8NC26 417 aa12.85□□□□□ -0.35
PTPN11-201ENST00000351677 SYNJ2BPP57105 145 aa12.85□□□□□ -0.35
PTPN11-201ENST00000351677 PDE6HQ13956 83 aa12.85□□□□□ -0.35
PTPN11-201ENST00000351677 IL17RELQ6ZVW7 336 aa12.85□□□□□ -0.35
PTPN11-201ENST00000351677 KLHL30-AS1Q8NEE0 82 aa12.85□□□□□ -0.35
PTPN11-201ENST00000351677 GFRA4Q9GZZ7 299 aa12.85□□□□□ -0.35
PTPN11-201ENST00000351677 C11orf68Q9H3H3 251 aaKnown RBP12.85□□□□□ -0.35
PTPN11-201ENST00000351677 IGLV3-9A0A075B6K5 115 aa12.85□□□□□ -0.35
PTPN11-201ENST00000351677 UBE2E2Q96LR5 201 aa12.85□□□□□ -0.35
PTPN11-201ENST00000351677 UBE2E1P51965 193 aa12.84□□□□□ -0.35
PTPN11-201ENST00000351677 VCYO14598 125 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 266.7 ms