RNA–Protein interactions for RNA: ENST00000337841.4

SPTLC1-202, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SPTLC1, Length 946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-202ENST00000337841 PAXXQ9BUH6 204 aa8.86□□□□□ -0.99
SPTLC1-202ENST00000337841 ACTR3CQ9C0K3 210 aaPredicted RBP8.86□□□□□ -0.99
SPTLC1-202ENST00000337841 HRH4Q9H3N8 390 aa8.86□□□□□ -0.99
SPTLC1-202ENST00000337841 CLEC5AQ9NY25 188 aa8.86□□□□□ -0.99
SPTLC1-202ENST00000337841 OR7C2O60412 319 aa8.85□□□□□ -0.99
SPTLC1-202ENST00000337841 SEC11BP0C7V7 166 aa8.85□□□□□ -0.99
SPTLC1-202ENST00000337841 SPP1P10451 314 aa8.85□□□□□ -0.99
SPTLC1-202ENST00000337841 KHDC3LQ587J8 217 aa8.85□□□□□ -0.99
SPTLC1-202ENST00000337841 FAM24BQ8N5W8 94 aa8.85□□□□□ -0.99
SPTLC1-202ENST00000337841 RNF141Q8WVD5 230 aa8.85□□□□□ -0.99
SPTLC1-202ENST00000337841 FAM167A-AS1Q96KT0 104 aa8.85□□□□□ -0.99
SPTLC1-202ENST00000337841 SLC50A1Q9BRV3 221 aa8.85□□□□□ -0.99
SPTLC1-202ENST00000337841 SLC25A2Q9BXI2 301 aa8.85□□□□□ -0.99
SPTLC1-202ENST00000337841 RPRMQ9NS64 109 aa8.85□□□□□ -0.99
SPTLC1-202ENST00000337841 CMYA5Q8N3K9 4069 aa8.85□□□□□ -0.99
SPTLC1-202ENST00000337841 LOC102724200A0A096LPH7 203 aaPredicted RBP8.84□□□□□ -0.99
SPTLC1-202ENST00000337841 H3BQ15 152 aa8.84□□□□□ -0.99
SPTLC1-202ENST00000337841 SOCS3O14543 225 aa8.84□□□□□ -0.99
SPTLC1-202ENST00000337841 SNRPCP09234 159 aaKnown RBP8.84□□□□□ -0.99
SPTLC1-202ENST00000337841 NBEAP1P0C6P0 100 aa8.84□□□□□ -0.99
SPTLC1-202ENST00000337841 FRMD6-AS1P0C7T7 363 aa8.84□□□□□ -0.99
SPTLC1-202ENST00000337841 IGLC2P0DOY2 106 aa8.84□□□□□ -0.99
SPTLC1-202ENST00000337841 CDC34P49427 236 aaPredicted RBP8.84□□□□□ -0.99
SPTLC1-202ENST00000337841 SMCPP49901 116 aaPredicted RBP8.84□□□□□ -0.99
SPTLC1-202ENST00000337841 PSG9Q00887 426 aa8.84□□□□□ -0.99
SPTLC1-202ENST00000337841 PQLC2Q6ZP29 291 aa8.84□□□□□ -0.99
SPTLC1-202ENST00000337841 SLC51BQ86UW2 128 aa8.84□□□□□ -0.99
SPTLC1-202ENST00000337841 RPP25LQ8N5L8 163 aaKnown RBP8.84□□□□□ -0.99
SPTLC1-202ENST00000337841 C17orf77Q96MU5 243 aa8.84□□□□□ -0.99
SPTLC1-202ENST00000337841 WFDC10AQ9H1F0 79 aa8.84□□□□□ -0.99
SPTLC1-202ENST00000337841 TRBV19A0A075B6N1 114 aa8.83□□□□□ -1
SPTLC1-202ENST00000337841 UMAD1C9J7I0 102 aa8.83□□□□□ -1
SPTLC1-202ENST00000337841 ZNF253O75346 499 aa8.83□□□□□ -1
SPTLC1-202ENST00000337841 PYYP10082 97 aa8.83□□□□□ -1
SPTLC1-202ENST00000337841 PSG3Q16557 428 aa8.83□□□□□ -1
SPTLC1-202ENST00000337841 EBLN2Q6P2I7 272 aa8.83□□□□□ -1
SPTLC1-202ENST00000337841 STHQ8IWL8 128 aa8.83□□□□□ -1
SPTLC1-202ENST00000337841 C9orf62Q8N4C0 152 aa8.83□□□□□ -1
SPTLC1-202ENST00000337841 STOML3Q8TAV4 291 aa8.83□□□□□ -1
SPTLC1-202ENST00000337841 BLNKQ8WV28 456 aa8.83□□□□□ -1
SPTLC1-202ENST00000337841 RAB24Q969Q5 203 aa8.83□□□□□ -1
SPTLC1-202ENST00000337841 ZNF331Q9NQX6 463 aaPredicted RBP8.83□□□□□ -1
SPTLC1-202ENST00000337841 ZNF586Q9NXT0 402 aa8.83□□□□□ -1
SPTLC1-202ENST00000337841 FBN3Q75N90 2809 aa8.83□□□□□ -1
SPTLC1-202ENST00000337841 TRAV8-2A0A0B4J237 113 aa8.82□□□□□ -1
SPTLC1-202ENST00000337841 RBMY1BA6NDE4 496 aaKnown RBP8.82□□□□□ -1
SPTLC1-202ENST00000337841 RBMY1EA6NEQ0 496 aaKnown RBP8.82□□□□□ -1
SPTLC1-202ENST00000337841 KNCNA6PVL3 124 aa8.82□□□□□ -1
SPTLC1-202ENST00000337841 H3BTX0 84 aa8.82□□□□□ -1
SPTLC1-202ENST00000337841 OR10J4P0C629 311 aa8.82□□□□□ -1
SPTLC1-202ENST00000337841 RBMY1DP0C7P1 496 aaKnown RBP8.82□□□□□ -1
SPTLC1-202ENST00000337841 PDE6HQ13956 83 aa8.82□□□□□ -1
SPTLC1-202ENST00000337841 ZNF124Q15973 351 aa8.82□□□□□ -1
SPTLC1-202ENST00000337841 ACTL10Q5JWF8 245 aa8.82□□□□□ -1
SPTLC1-202ENST00000337841 IGFL4Q6B9Z1 124 aa8.82□□□□□ -1
SPTLC1-202ENST00000337841 LINC00322Q6ZN03 302 aaPredicted RBP8.82□□□□□ -1
SPTLC1-202ENST00000337841 ZNF738Q8NE65 137 aa8.82□□□□□ -1
SPTLC1-202ENST00000337841 FXYD5Q96DB9 178 aa8.82□□□□□ -1
SPTLC1-202ENST00000337841 SAT2Q96F10 170 aaPredicted RBP8.82□□□□□ -1
SPTLC1-202ENST00000337841 CITED4Q96RK1 184 aa8.82□□□□□ -1
SPTLC1-202ENST00000337841 B9D2Q9BPU9 175 aa8.82□□□□□ -1
SPTLC1-202ENST00000337841 AAMDCQ9H7C9 122 aa8.82□□□□□ -1
SPTLC1-202ENST00000337841 PRELID1Q9Y255 219 aa8.82□□□□□ -1
SPTLC1-202ENST00000337841 CTXND1A0A1B0GTU2 59 aa8.81□□□□□ -1
SPTLC1-202ENST00000337841 UBE2CO00762 179 aa8.81□□□□□ -1
SPTLC1-202ENST00000337841 HMGB3O15347 200 aaKnown RBP8.81□□□□□ -1
SPTLC1-202ENST00000337841 CXorf1O96002 111 aa8.81□□□□□ -1
SPTLC1-202ENST00000337841 STAG3L2P0CL84 134 aa8.81□□□□□ -1
SPTLC1-202ENST00000337841 STAG3L3P0CL85 134 aa8.81□□□□□ -1
SPTLC1-202ENST00000337841 RPL35AP18077 110 aaKnown RBP8.81□□□□□ -1
SPTLC1-202ENST00000337841 APOC4P55056 127 aa8.81□□□□□ -1
SPTLC1-202ENST00000337841 UBE2L3P68036 154 aaKnown RBP8.81□□□□□ -1
SPTLC1-202ENST00000337841 FOXI2Q6ZQN5 318 aa8.81□□□□□ -1
SPTLC1-202ENST00000337841 LYPD1Q8N2G4 141 aa8.81□□□□□ -1
SPTLC1-202ENST00000337841 RNF182Q8N6D2 247 aa8.81□□□□□ -1
SPTLC1-202ENST00000337841 C20orf173Q96LM9 149 aa8.81□□□□□ -1
SPTLC1-202ENST00000337841 KIR2DL5BA0A0G2JN68 375 aa8.8□□□□□ -1
SPTLC1-202ENST00000337841 KIR2DL5BA0A0G2JPC4 375 aa8.8□□□□□ -1
SPTLC1-202ENST00000337841 EIF3GO75821 320 aaKnown RBP eCLIP8.8□□□□□ -1
SPTLC1-202ENST00000337841 DUSP14O95147 198 aaKnown RBP8.8□□□□□ -1
SPTLC1-202ENST00000337841 NHLRC4P0CG21 123 aaPredicted RBP8.8□□□□□ -1
SPTLC1-202ENST00000337841 RAB5CP51148 216 aa8.8□□□□□ -1
SPTLC1-202ENST00000337841 NKX2-5P52952 324 aaPredicted RBP8.8□□□□□ -1
SPTLC1-202ENST00000337841 RANP62826 216 aaKnown RBP8.8□□□□□ -1
SPTLC1-202ENST00000337841 HAGHQ16775 308 aa8.8□□□□□ -1
SPTLC1-202ENST00000337841 DPPA3Q6W0C5 159 aa8.8□□□□□ -1
SPTLC1-202ENST00000337841 KIR2DL5AQ8N109 375 aa8.8□□□□□ -1
SPTLC1-202ENST00000337841 KIR2DL5BQ8NHK3 375 aa8.8□□□□□ -1
SPTLC1-202ENST00000337841 TMED6Q8WW62 240 aa8.8□□□□□ -1
SPTLC1-202ENST00000337841 RPUSD4Q96CM3 377 aaKnown RBP8.8□□□□□ -1
SPTLC1-202ENST00000337841 ZNF503Q96F45 646 aa8.8□□□□□ -1
SPTLC1-202ENST00000337841 ASCL2Q99929 193 aa8.8□□□□□ -1
SPTLC1-202ENST00000337841 CSTL1Q9H114 145 aa8.8□□□□□ -1
SPTLC1-202ENST00000337841 SAV1Q9H4B6 383 aaPredicted RBP8.8□□□□□ -1
SPTLC1-202ENST00000337841 TMEM167BQ9NRX6 74 aa8.8□□□□□ -1
SPTLC1-202ENST00000337841 H3BMM0 161 aa8.79□□□□□ -1
SPTLC1-202ENST00000337841 SLC17A3O00476 420 aa8.79□□□□□ -1
SPTLC1-202ENST00000337841 NDUFB4O95168 129 aa8.79□□□□□ -1
SPTLC1-202ENST00000337841 ARL14EPLP0DKL9 152 aa8.79□□□□□ -1
SPTLC1-202ENST00000337841 HLA-DRB4P13762 266 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms