RNA–Protein interactions for RNA: ENST00000337354.8

SEC13-201, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SEC13, Length 1,363 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-201ENST00000337354 UBQLN2Q9UHD9 624 aa11.43□□□□□ -0.58
SEC13-201ENST00000337354 UMAD1C9J7I0 102 aa11.42□□□□□ -0.58
SEC13-201ENST00000337354 ZNF253O75346 499 aa11.42□□□□□ -0.58
SEC13-201ENST00000337354 ZNF688P0C7X2 276 aa11.42□□□□□ -0.58
SEC13-201ENST00000337354 KHDC3LQ587J8 217 aa11.42□□□□□ -0.58
SEC13-201ENST00000337354 PQLC2Q6ZP29 291 aa11.42□□□□□ -0.58
SEC13-201ENST00000337354 SLC50A1Q9BRV3 221 aa11.42□□□□□ -0.58
SEC13-201ENST00000337354 H3BQ15 152 aa11.41□□□□□ -0.58
SEC13-201ENST00000337354 OR7C2O60412 319 aa11.41□□□□□ -0.58
SEC13-201ENST00000337354 CDC34P49427 236 aaPredicted RBP11.41□□□□□ -0.58
SEC13-201ENST00000337354 PDE6HQ13956 83 aa11.41□□□□□ -0.58
SEC13-201ENST00000337354 PSMG4Q5JS54 123 aa11.41□□□□□ -0.58
SEC13-201ENST00000337354 FAM122CQ6P4D5 195 aa11.41□□□□□ -0.58
SEC13-201ENST00000337354 RNF141Q8WVD5 230 aa11.41□□□□□ -0.58
SEC13-201ENST00000337354 RAB24Q969Q5 203 aa11.41□□□□□ -0.58
SEC13-201ENST00000337354 SAT2Q96F10 170 aaPredicted RBP11.41□□□□□ -0.58
SEC13-201ENST00000337354 PAXXQ9BUH6 204 aa11.41□□□□□ -0.58
SEC13-201ENST00000337354 DNAH3Q8TD57 4116 aa11.41□□□□□ -0.58
SEC13-201ENST00000337354 TRBV19A0A075B6N1 114 aa11.41□□□□□ -0.58
SEC13-201ENST00000337354 NBEAP1P0C6P0 100 aa11.41□□□□□ -0.58
SEC13-201ENST00000337354 APRG1Q8IVJ8 170 aa11.41□□□□□ -0.58
SEC13-201ENST00000337354 LINC00052Q96N35 136 aa11.41□□□□□ -0.58
SEC13-201ENST00000337354 SRD5A3Q9H8P0 318 aa11.41□□□□□ -0.58
SEC13-201ENST00000337354 ZNF331Q9NQX6 463 aaPredicted RBP11.41□□□□□ -0.58
SEC13-201ENST00000337354 ZNF586Q9NXT0 402 aa11.41□□□□□ -0.58
SEC13-201ENST00000337354 PRKDCP78527 4128 aaKnown RBP11.4□□□□□ -0.58
SEC13-201ENST00000337354 TRAV8-2A0A0B4J237 113 aa11.4□□□□□ -0.59
SEC13-201ENST00000337354 STAG3L2P0CL84 134 aa11.4□□□□□ -0.59
SEC13-201ENST00000337354 STAG3L3P0CL85 134 aa11.4□□□□□ -0.59
SEC13-201ENST00000337354 PYYP10082 97 aa11.4□□□□□ -0.59
SEC13-201ENST00000337354 PSG9Q00887 426 aa11.4□□□□□ -0.59
SEC13-201ENST00000337354 LINC00322Q6ZN03 302 aaPredicted RBP11.4□□□□□ -0.59
SEC13-201ENST00000337354 WFDC10AQ9H1F0 79 aa11.4□□□□□ -0.59
SEC13-201ENST00000337354 SORL1Q92673 2214 aa11.39□□□□□ -0.59
SEC13-201ENST00000337354 RAB5CP51148 216 aa11.39□□□□□ -0.59
SEC13-201ENST00000337354 DPPA3Q6W0C5 159 aa11.39□□□□□ -0.59
SEC13-201ENST00000337354 FXYD5Q96DB9 178 aa11.39□□□□□ -0.59
SEC13-201ENST00000337354 ZNF503Q96F45 646 aa11.39□□□□□ -0.59
SEC13-201ENST00000337354 CITED4Q96RK1 184 aa11.39□□□□□ -0.59
SEC13-201ENST00000337354 LOC102724200A0A096LPH7 203 aaPredicted RBP11.38□□□□□ -0.59
SEC13-201ENST00000337354 CTXND1A0A1B0GTU2 59 aa11.38□□□□□ -0.59
SEC13-201ENST00000337354 CXorf1O96002 111 aa11.38□□□□□ -0.59
SEC13-201ENST00000337354 SNRPCP09234 159 aaKnown RBP11.38□□□□□ -0.59
SEC13-201ENST00000337354 OR10J4P0C629 311 aa11.38□□□□□ -0.59
SEC13-201ENST00000337354 FRMD6-AS1P0C7T7 363 aa11.38□□□□□ -0.59
SEC13-201ENST00000337354 NKX2-5P52952 324 aaPredicted RBP11.38□□□□□ -0.59
SEC13-201ENST00000337354 PSG3Q16557 428 aa11.38□□□□□ -0.59
SEC13-201ENST00000337354 FOXI2Q6ZQN5 318 aa11.38□□□□□ -0.59
SEC13-201ENST00000337354 STHQ8IWL8 128 aa11.38□□□□□ -0.59
SEC13-201ENST00000337354 LYPD1Q8N2G4 141 aa11.38□□□□□ -0.59
SEC13-201ENST00000337354 UBE2L3P68036 154 aaKnown RBP11.37□□□□□ -0.59
SEC13-201ENST00000337354 EBLN2Q6P2I7 272 aa11.37□□□□□ -0.59
SEC13-201ENST00000337354 BLNKQ8WV28 456 aa11.37□□□□□ -0.59
SEC13-201ENST00000337354 TMED6Q8WW62 240 aa11.37□□□□□ -0.59
SEC13-201ENST00000337354 PHYHIPLQ96FC7 376 aa11.37□□□□□ -0.59
SEC13-201ENST00000337354 SAV1Q9H4B6 383 aaPredicted RBP11.37□□□□□ -0.59
SEC13-201ENST00000337354 AAMDCQ9H7C9 122 aa11.37□□□□□ -0.59
SEC13-201ENST00000337354 PRELID1Q9Y255 219 aa11.37□□□□□ -0.59
SEC13-201ENST00000337354 KIR2DL5BA0A0G2JN68 375 aa11.36□□□□□ -0.59
SEC13-201ENST00000337354 KIR2DL5BA0A0G2JPC4 375 aa11.36□□□□□ -0.59
SEC13-201ENST00000337354 RBMY1BA6NDE4 496 aaKnown RBP11.36□□□□□ -0.59
SEC13-201ENST00000337354 RBMY1EA6NEQ0 496 aaKnown RBP11.36□□□□□ -0.59
SEC13-201ENST00000337354 H3BTX0 84 aa11.36□□□□□ -0.59
SEC13-201ENST00000337354 HMGB3O15347 200 aaKnown RBP11.36□□□□□ -0.59
SEC13-201ENST00000337354 NDUFB4O95168 129 aa11.36□□□□□ -0.59
SEC13-201ENST00000337354 RBMY1DP0C7P1 496 aaKnown RBP11.36□□□□□ -0.59
SEC13-201ENST00000337354 ARL14EPLP0DKL9 152 aa11.36□□□□□ -0.59
SEC13-201ENST00000337354 ZNF124Q15973 351 aa11.36□□□□□ -0.59
SEC13-201ENST00000337354 ACTL10Q5JWF8 245 aa11.36□□□□□ -0.59
SEC13-201ENST00000337354 IGFL4Q6B9Z1 124 aa11.36□□□□□ -0.59
SEC13-201ENST00000337354 KIR2DL5AQ8N109 375 aa11.36□□□□□ -0.59
SEC13-201ENST00000337354 KIR2DL5BQ8NHK3 375 aa11.36□□□□□ -0.59
SEC13-201ENST00000337354 SUN5Q8TC36 379 aa11.36□□□□□ -0.59
SEC13-201ENST00000337354 MRPL53Q96EL3 112 aaKnown RBP11.36□□□□□ -0.59
SEC13-201ENST00000337354 C20orf173Q96LM9 149 aa11.36□□□□□ -0.59
SEC13-201ENST00000337354 B9D2Q9BPU9 175 aa11.36□□□□□ -0.59
SEC13-201ENST00000337354 TMEM167BQ9NRX6 74 aa11.36□□□□□ -0.59
SEC13-201ENST00000337354 PLA2G2EQ9NZK7 142 aa11.36□□□□□ -0.59
SEC13-201ENST00000337354 SLC17A3O00476 420 aa11.35□□□□□ -0.59
SEC13-201ENST00000337354 TGP01266 2768 aa11.35□□□□□ -0.59
SEC13-201ENST00000337354 HLA-DRB4P13762 266 aa11.35□□□□□ -0.59
SEC13-201ENST00000337354 APOC4P55056 127 aa11.35□□□□□ -0.59
SEC13-201ENST00000337354 ZNF726P1Q15940 193 aa11.35□□□□□ -0.59
SEC13-201ENST00000337354 RNF182Q8N6D2 247 aa11.35□□□□□ -0.59
SEC13-201ENST00000337354 ZNF738Q8NE65 137 aa11.35□□□□□ -0.59
SEC13-201ENST00000337354 CLUHP3Q96NS8 147 aa11.35□□□□□ -0.59
SEC13-201ENST00000337354 HLA-DRB4X5D2U9 266 aa11.35□□□□□ -0.59
SEC13-201ENST00000337354 A0A0J9YX75 114 aa11.34□□□□□ -0.59
SEC13-201ENST00000337354 KNCNA6PVL3 124 aa11.34□□□□□ -0.59
SEC13-201ENST00000337354 H3BMM0 161 aa11.34□□□□□ -0.59
SEC13-201ENST00000337354 UBE2CO00762 179 aa11.34□□□□□ -0.59
SEC13-201ENST00000337354 EIF3GO75821 320 aaKnown RBP eCLIP11.34□□□□□ -0.59
SEC13-201ENST00000337354 GCHFRP30047 84 aa11.34□□□□□ -0.59
SEC13-201ENST00000337354 NUTF2P61970 127 aaKnown RBP11.34□□□□□ -0.59
SEC13-201ENST00000337354 RANP62826 216 aaKnown RBP11.34□□□□□ -0.59
SEC13-201ENST00000337354 TRPT1Q86TN4 253 aaKnown RBP11.34□□□□□ -0.59
SEC13-201ENST00000337354 MBD3L1Q8WWY6 194 aa11.34□□□□□ -0.59
SEC13-201ENST00000337354 RPUSD4Q96CM3 377 aaKnown RBP11.34□□□□□ -0.59
SEC13-201ENST00000337354 DUSP14O95147 198 aaKnown RBP11.33□□□□□ -0.6
SEC13-201ENST00000337354 NHLRC4P0CG21 123 aaPredicted RBP11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms