RNA–Protein interactions for RNA: ENST00000330137.11

SKA2-201, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKA2, Length 2,798 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-201ENST00000330137 GAGE12GP0CL81 117 aa6.67□□□□□ -1.34
SKA2-201ENST00000330137 GAGE12IP0CL82 117 aa6.67□□□□□ -1.34
SKA2-201ENST00000330137 PLNP26678 52 aa6.67□□□□□ -1.34
SKA2-201ENST00000330137 INSL3P51460 131 aa6.67□□□□□ -1.34
SKA2-201ENST00000330137 GAGE4Q13068 117 aa6.67□□□□□ -1.34
SKA2-201ENST00000330137 KLF14Q8TD94 323 aaPredicted RBP6.67□□□□□ -1.34
SKA2-201ENST00000330137 NPIPB3Q92617 1050 aa6.67□□□□□ -1.34
SKA2-201ENST00000330137 FAM173AQ9BQD7 235 aa6.67□□□□□ -1.34
SKA2-201ENST00000330137 ZNF71Q9NQZ8 489 aaPredicted RBP6.67□□□□□ -1.34
SKA2-201ENST00000330137 DIDO1Q9BTC0 2240 aaKnown RBP6.67□□□□□ -1.34
SKA2-201ENST00000330137 DYSFO75923 2080 aa6.67□□□□□ -1.34
SKA2-201ENST00000330137 CENPVL3A0A0U1RRI6 287 aa6.66□□□□□ -1.34
SKA2-201ENST00000330137 PATE3B3GLJ2 98 aa6.66□□□□□ -1.34
SKA2-201ENST00000330137 TM4SF5O14894 197 aa6.66□□□□□ -1.34
SKA2-201ENST00000330137 IL4P05112 153 aa6.66□□□□□ -1.34
SKA2-201ENST00000330137 MRPL51Q4U2R6 128 aaKnown RBP6.66□□□□□ -1.34
SKA2-201ENST00000330137 SPANXDQ9BXN6 97 aa6.66□□□□□ -1.34
SKA2-201ENST00000330137 CFAP54Q96N23 3096 aa6.66□□□□□ -1.34
SKA2-201ENST00000330137 PTPRZ1P23471 2315 aaPredicted RBP6.66□□□□□ -1.34
SKA2-201ENST00000330137 MED12Q93074 2177 aa6.66□□□□□ -1.34
SKA2-201ENST00000330137 TANC2Q9HCD6 1990 aa6.66□□□□□ -1.34
SKA2-201ENST00000330137 RIF1Q5UIP0 2472 aaKnown RBP6.66□□□□□ -1.34
SKA2-201ENST00000330137 EP300Q09472 2414 aaPredicted RBP6.66□□□□□ -1.34
SKA2-201ENST00000330137 NCBP2LA6PVI3 153 aaKnown RBP6.66□□□□□ -1.34
SKA2-201ENST00000330137 K7EM74 188 aa6.66□□□□□ -1.34
SKA2-201ENST00000330137 MLANAQ16655 118 aa6.66□□□□□ -1.34
SKA2-201ENST00000330137 C17orf58Q2M2W7 97 aa6.66□□□□□ -1.34
SKA2-201ENST00000330137 C1orf229Q6ZS94 237 aaPredicted RBP6.66□□□□□ -1.34
SKA2-201ENST00000330137 OR4C13Q8NGP0 309 aa6.66□□□□□ -1.34
SKA2-201ENST00000330137 LINC01600Q96MT4 127 aa6.66□□□□□ -1.34
SKA2-201ENST00000330137 HIST1H4GQ99525 98 aa6.66□□□□□ -1.34
SKA2-201ENST00000330137 FSCN3Q9NQT6 498 aa6.66□□□□□ -1.34
SKA2-201ENST00000330137 SAA1P0DJI8 122 aaPredicted RBP6.65□□□□□ -1.34
SKA2-201ENST00000330137 UBE2D3P61077 147 aa6.65□□□□□ -1.34
SKA2-201ENST00000330137 UBE2D2P62837 147 aa6.65□□□□□ -1.34
SKA2-201ENST00000330137 TM4SF20Q53R12 229 aa6.65□□□□□ -1.34
SKA2-201ENST00000330137 PRR30Q53SZ7 412 aaPredicted RBP6.65□□□□□ -1.34
SKA2-201ENST00000330137 SHISA2Q6UWI4 295 aa6.65□□□□□ -1.34
SKA2-201ENST00000330137 RPEQ96AT9 228 aa6.65□□□□□ -1.34
SKA2-201ENST00000330137 PCSK5Q92824 1860 aa6.65□□□□□ -1.34
SKA2-201ENST00000330137 GON4LQ3T8J9 2241 aa6.65□□□□□ -1.34
SKA2-201ENST00000330137 C16orf97H3BN30 126 aa6.65□□□□□ -1.35
SKA2-201ENST00000330137 CKS2P33552 79 aa6.65□□□□□ -1.35
SKA2-201ENST00000330137 FOLR3P41439 243 aa6.65□□□□□ -1.35
SKA2-201ENST00000330137 RPL32P62910 135 aaKnown RBP6.65□□□□□ -1.35
SKA2-201ENST00000330137 EDDM3AQ14507 147 aa6.65□□□□□ -1.35
SKA2-201ENST00000330137 PLGLAQ15195 96 aa6.65□□□□□ -1.35
SKA2-201ENST00000330137 ZC2HC1BQ5TFG8 222 aa6.65□□□□□ -1.35
SKA2-201ENST00000330137 MBNL2Q5VZF2 373 aaKnown RBP6.65□□□□□ -1.35
SKA2-201ENST00000330137 ZNF826PQ6ZT77 177 aa6.65□□□□□ -1.35
SKA2-201ENST00000330137 ZNF833PQ6ZTB9 187 aa6.65□□□□□ -1.35
SKA2-201ENST00000330137 PRNTQ86SH4 94 aa6.65□□□□□ -1.35
SKA2-201ENST00000330137 NFE4Q86UQ8 179 aa6.65□□□□□ -1.35
SKA2-201ENST00000330137 DCTN5Q9BTE1 182 aa6.65□□□□□ -1.35
SKA2-201ENST00000330137 CNFNQ9BYD5 112 aa6.65□□□□□ -1.35
SKA2-201ENST00000330137 FAM186AA6NE01 2351 aa6.64□□□□□ -1.35
SKA2-201ENST00000330137 IGKV1D-17A0A075B6S4 117 aa6.64□□□□□ -1.35
SKA2-201ENST00000330137 TRAV12-1A0A0B4J245 112 aa6.64□□□□□ -1.35
SKA2-201ENST00000330137 LOC389332A0A1B0GUA5 103 aa6.64□□□□□ -1.35
SKA2-201ENST00000330137 SMCPP49901 116 aaPredicted RBP6.64□□□□□ -1.35
SKA2-201ENST00000330137 MORN3Q6PF18 240 aaPredicted RBP6.64□□□□□ -1.35
SKA2-201ENST00000330137 OR11H6Q8NGC7 330 aa6.64□□□□□ -1.35
SKA2-201ENST00000330137 HIGD1AQ9Y241 93 aa6.64□□□□□ -1.35
SKA2-201ENST00000330137 UFC1Q9Y3C8 167 aa6.64□□□□□ -1.35
SKA2-201ENST00000330137 UNC13CQ8NB66 2214 aa6.64□□□□□ -1.35
SKA2-201ENST00000330137 GPR179Q6PRD1 2367 aa6.64□□□□□ -1.35
SKA2-201ENST00000330137 LAMA1P25391 3075 aa6.64□□□□□ -1.35
SKA2-201ENST00000330137 MYMXA0A1B0GTQ4 84 aa6.64□□□□□ -1.35
SKA2-201ENST00000330137 A0A1W2PQM1 296 aa6.64□□□□□ -1.35
SKA2-201ENST00000330137 PRRG2O14669 202 aa6.64□□□□□ -1.35
SKA2-201ENST00000330137 PRSS1P07477 247 aa6.64□□□□□ -1.35
SKA2-201ENST00000330137 MYOD1P15172 320 aa6.64□□□□□ -1.35
SKA2-201ENST00000330137 TNFRSF1AP19438 455 aa6.64□□□□□ -1.35
SKA2-201ENST00000330137 SPINK2P20155 84 aa6.64□□□□□ -1.35
SKA2-201ENST00000330137 HERV-K104P63124 156 aa6.64□□□□□ -1.35
SKA2-201ENST00000330137 ALKBH6Q3KRA9 238 aa6.64□□□□□ -1.35
SKA2-201ENST00000330137 HARBI1Q96MB7 349 aa6.64□□□□□ -1.35
SKA2-201ENST00000330137 PIEZO1Q92508 2521 aa6.64□□□□□ -1.35
SKA2-201ENST00000330137 MRPL23Q16540 153 aaKnown RBP6.63□□□□□ -1.35
SKA2-201ENST00000330137 AMTNQ6UX39 209 aa6.63□□□□□ -1.35
SKA2-201ENST00000330137 SGK494Q96LW2 274 aa6.63□□□□□ -1.35
SKA2-201ENST00000330137 TMEM126AQ9H061 195 aa6.63□□□□□ -1.35
SKA2-201ENST00000330137 A0A087WX48 190 aa6.63□□□□□ -1.35
SKA2-201ENST00000330137 FABP5P3A8MUU1 101 aa6.63□□□□□ -1.35
SKA2-201ENST00000330137 A8MWV9 139 aa6.63□□□□□ -1.35
SKA2-201ENST00000330137 B5MCH6 92 aa6.63□□□□□ -1.35
SKA2-201ENST00000330137 ZNHIT1O43257 154 aa6.63□□□□□ -1.35
SKA2-201ENST00000330137 CEACAM4O75871 244 aa6.63□□□□□ -1.35
SKA2-201ENST00000330137 NHLRC4P0CG21 123 aaPredicted RBP6.63□□□□□ -1.35
SKA2-201ENST00000330137 ORM2P19652 201 aa6.63□□□□□ -1.35
SKA2-201ENST00000330137 GATA3P23771 443 aa6.63□□□□□ -1.35
SKA2-201ENST00000330137 UBE2D1P51668 147 aa6.63□□□□□ -1.35
SKA2-201ENST00000330137 NDUFV3P56181 108 aaKnown RBP6.63□□□□□ -1.35
SKA2-201ENST00000330137 PDE6HQ13956 83 aa6.63□□□□□ -1.35
SKA2-201ENST00000330137 LYZL1Q6UWQ5 148 aa6.63□□□□□ -1.35
SKA2-201ENST00000330137 GOLT1AQ6ZVE7 132 aa6.63□□□□□ -1.35
SKA2-201ENST00000330137 AMN1Q8IY45 258 aa6.63□□□□□ -1.35
SKA2-201ENST00000330137 Q8N8P6 123 aa6.63□□□□□ -1.35
SKA2-201ENST00000330137 SPANXCQ9NY87 97 aa6.63□□□□□ -1.35
SKA2-201ENST00000330137 OTOGLQ3ZCN5 2332 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms